BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0068.0009.p         (209 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_577862.1| ribulose-phosphate 3-epimerase [Nitrobacter ham...   352   3e-95
ref|YP_001241218.1| ribulose-5-phosphate 3-epimerase [Bradyrhizo...   350   9e-95
ref|YP_001204889.1| ribulose-phosphate 3-epimerase [Bradyrhizobi...   349   2e-94
ref|NP_772320.1| ribulose-phosphate 3-epimerase [Bradyrhizobium ...   348   3e-94
ref|YP_487295.1| ribulose-phosphate 3-epimerase [Rhodopseudomona...   345   2e-93

>ref|YP_577862.1| ribulose-phosphate 3-epimerase [Nitrobacter hamburgensis X14]
 gb|ABE63402.1| ribulose-5-phosphate 3-epimerase [Nitrobacter hamburgensis X14]
          Length = 233

 Score =  352 bits (902), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 167/185 (90%), Positives = 175/185 (94%)

Query: 1   MTQSFTPRPLVIAPSILASDFSKLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK 60
           M+Q+F PRPLVIAPSILASDFSKLGEEVRAVDQ GADWIHLDVMDGHFVPNISYGPDVIK
Sbjct: 1   MSQTFVPRPLVIAPSILASDFSKLGEEVRAVDQGGADWIHLDVMDGHFVPNISYGPDVIK 60

Query: 61  AMRPHTRKIFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120
           AMRPHT+KIFDAHLMISPCDPYLEAFAKAGCDHITVH EAGPHLHRSLQAIRALGKKAGV
Sbjct: 61  AMRPHTKKIFDAHLMISPCDPYLEAFAKAGCDHITVHVEAGPHLHRSLQAIRALGKKAGV 120

Query: 121 SLNPATPASAIEYVLDLIDLVLVMSVNPGFGGQAFIRSAIGKISDVRAMVAGRPIDIEVD 180
           SLNPATP S IEYVLD++DLVLVMSVNPGFGGQ FI SA+ KI D+RAM AGRPIDIEVD
Sbjct: 121 SLNPATPLSTIEYVLDMVDLVLVMSVNPGFGGQKFITSALDKIRDLRAMTAGRPIDIEVD 180

Query: 181 GGLAP 185
           GG+AP
Sbjct: 181 GGVAP 185


>ref|YP_001241218.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
 gb|ABQ37312.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
          Length = 233

 Score =  350 bits (897), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 168/184 (91%), Positives = 176/184 (95%)

Query: 1   MTQSFTPRPLVIAPSILASDFSKLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK 60
           MTQSFTPRPLVIAPSILASDFSKLGEEVRAVD AGADWIHLDVMDGHFVPNISYGPDVIK
Sbjct: 1   MTQSFTPRPLVIAPSILASDFSKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIK 60

Query: 61  AMRPHTRKIFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120
           A+RPHT KIFDAHLMI+PCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV
Sbjct: 61  ALRPHTTKIFDAHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120

Query: 121 SLNPATPASAIEYVLDLIDLVLVMSVNPGFGGQAFIRSAIGKISDVRAMVAGRPIDIEVD 180
           SLNP+TP + IEYVLDL+DLVL+MSVNPGFGGQAFI SAIGKI D+RAM AGRPIDIEVD
Sbjct: 121 SLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIPSAIGKIQDLRAMTAGRPIDIEVD 180

Query: 181 GGLA 184
           GG+ 
Sbjct: 181 GGVG 184


>ref|YP_001204889.1| ribulose-phosphate 3-epimerase [Bradyrhizobium sp. ORS 278]
 emb|CAL76652.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
           (PPE) (R5P3E) [Bradyrhizobium sp. ORS 278]
          Length = 233

 Score =  349 bits (895), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 166/184 (90%), Positives = 176/184 (95%)

Query: 1   MTQSFTPRPLVIAPSILASDFSKLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK 60
           MTQSFTPRPLVIAPSILASDF+KLGEEVRAVD AGADWIHLDVMDGHFVPNISYGPDVIK
Sbjct: 1   MTQSFTPRPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIK 60

Query: 61  AMRPHTRKIFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120
           A+RPHT KIFDAHLMI+PCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV
Sbjct: 61  ALRPHTTKIFDAHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120

Query: 121 SLNPATPASAIEYVLDLIDLVLVMSVNPGFGGQAFIRSAIGKISDVRAMVAGRPIDIEVD 180
           SLNP+TP + IEYVLDL+DLVL+MSVNPGFGGQAFI SAIGK+ D+RAM AGRPIDIEVD
Sbjct: 121 SLNPSTPLNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAIGKVQDLRAMTAGRPIDIEVD 180

Query: 181 GGLA 184
           GG+ 
Sbjct: 181 GGVG 184


>ref|NP_772320.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50945.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
          Length = 233

 Score =  348 bits (893), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 166/185 (89%), Positives = 175/185 (94%)

Query: 1   MTQSFTPRPLVIAPSILASDFSKLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK 60
           MTQ+FTPRPL IAPSILASDFS+LGEEVRAVD AGADWIHLDVMDGHFVPNISYGPDVIK
Sbjct: 1   MTQAFTPRPLAIAPSILASDFSRLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIK 60

Query: 61  AMRPHTRKIFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120
           AMRPHT+K+FDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV
Sbjct: 61  AMRPHTKKVFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120

Query: 121 SLNPATPASAIEYVLDLIDLVLVMSVNPGFGGQAFIRSAIGKISDVRAMVAGRPIDIEVD 180
           SLNP TP   +EYV+DL+DLVLVMSVNPGFGGQAFI SAIGKI D+RAM AGRPIDIEVD
Sbjct: 121 SLNPGTPIGVLEYVIDLVDLVLVMSVNPGFGGQAFIPSAIGKIRDIRAMTAGRPIDIEVD 180

Query: 181 GGLAP 185
           GG+ P
Sbjct: 181 GGVGP 185


>ref|YP_487295.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris HaA2]
 gb|ABD08384.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris HaA2]
          Length = 232

 Score =  345 bits (885), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 166/184 (90%), Positives = 176/184 (95%), Gaps = 1/184 (0%)

Query: 1   MTQSFTPRPLVIAPSILASDFSKLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK 60
           MTQ   PRPLVIAPSILASDFS+LGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK
Sbjct: 1   MTQ-LAPRPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIK 59

Query: 61  AMRPHTRKIFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGV 120
           AMRPHT KIFDAHLMI+PCDPYLEAFAKAGCDHIT+HAEAGPHLHRSLQAIRALGKKAGV
Sbjct: 60  AMRPHTTKIFDAHLMIAPCDPYLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGV 119

Query: 121 SLNPATPASAIEYVLDLIDLVLVMSVNPGFGGQAFIRSAIGKISDVRAMVAGRPIDIEVD 180
           SLNP+TPASA+EYV+D+IDLVLVMSVNPGFGGQAFI SAI KI D+RAM AGRPIDIEVD
Sbjct: 120 SLNPSTPASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAINKIQDIRAMTAGRPIDIEVD 179

Query: 181 GGLA 184
           GG++
Sbjct: 180 GGVS 183