BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0068.0004.p         (59 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_531500.1| ABC transporter-like protein [Rhodopseudomonas ...    92   2e-17
ref|NP_772314.1| ABC transporter ATP-binding protein [Bradyrhizo...    91   4e-17
ref|YP_001204895.1| high-affinity branched-chain amino acid ABC ...    89   2e-16
ref|YP_002288474.1| branched-chain amino acid transport ATP-bind...    87   1e-15
ref|ZP_07024894.1| ABC transporter related protein [Afipia sp. 1...    86   2e-15

>ref|YP_531500.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18]
 gb|ABD87181.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
          Length = 244

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 47/52 (90%)

Query: 1   MSVAENLQMGADATECSEAERAAGLERVFALFPRLKERVAQRGGTLSGGEQQ 52
           MSVAENLQMGADATE SEA+RA GL+RV  LFPRLKER+ QRGGTLSGGEQQ
Sbjct: 95  MSVAENLQMGADATETSEADRAVGLDRVLTLFPRLKERLTQRGGTLSGGEQQ 146


>ref|NP_772314.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC50939.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 246

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 47/52 (90%)

Query: 1   MSVAENLQMGADATECSEAERAAGLERVFALFPRLKERVAQRGGTLSGGEQQ 52
           MSVAENLQMGADAT C+++ER A LERVF LFPRLKER AQRGGTLSGGEQQ
Sbjct: 97  MSVAENLQMGADATGCTDSERDATLERVFNLFPRLKERYAQRGGTLSGGEQQ 148


>ref|YP_001204895.1| high-affinity branched-chain amino acid ABC transporter ATP-binding
           protein [Bradyrhizobium sp. ORS 278]
 emb|CAL76658.1| high-affinity branched-chain amino acid ABC transporter
           (ATP-binding protein) [Bradyrhizobium sp. ORS 278]
          Length = 243

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/52 (82%), Positives = 47/52 (90%)

Query: 1   MSVAENLQMGADATECSEAERAAGLERVFALFPRLKERVAQRGGTLSGGEQQ 52
           MSVAENLQMGADA + +EA+RA  LERVFALFPRLKER+ QRGGTLSGGEQQ
Sbjct: 95  MSVAENLQMGADAGDTTEAQRADTLERVFALFPRLKERIDQRGGTLSGGEQQ 146


>ref|YP_002288474.1| branched-chain amino acid transport ATP-binding proteinlivF (LIV-I
           protein F) [Oligotropha carboxidovorans OM5]
 ref|YP_004633447.1| branched-chain amino acid ABC transporter ATP-binding protein
           [Oligotropha carboxidovorans OM5]
 gb|ACI92609.1| high-affinity branched-chain amino acid transport ATP-binding
           proteinlivF (LIV-I protein F) [Oligotropha
           carboxidovorans OM5]
 gb|AEI03629.1| ABC transporter, high-affinity branched-chain amino acid transport
           ATP-binding protein LivF [Oligotropha carboxidovorans
           OM4]
 gb|AEI07206.1| ABC transporter, high-affinity branched-chain amino acid transport
           ATP-binding protein LivF [Oligotropha carboxidovorans
           OM5]
          Length = 244

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 44/52 (84%)

Query: 1   MSVAENLQMGADATECSEAERAAGLERVFALFPRLKERVAQRGGTLSGGEQQ 52
           MSVAENLQMGADA   SE+E AA LERV  LFPRLKER+ QRGGTLSGGEQQ
Sbjct: 96  MSVAENLQMGADAAHVSESEHAADLERVLTLFPRLKERLTQRGGTLSGGEQQ 147


>ref|ZP_07024894.1| ABC transporter related protein [Afipia sp. 1NLS2]
 gb|EFI52036.1| ABC transporter related protein [Afipia sp. 1NLS2]
          Length = 243

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/52 (82%), Positives = 45/52 (86%)

Query: 1   MSVAENLQMGADATECSEAERAAGLERVFALFPRLKERVAQRGGTLSGGEQQ 52
           MSVAENLQMGADA E SE+E AA LERV  LFPRLKER+ QRGGTLSGGEQQ
Sbjct: 95  MSVAENLQMGADAAEASESECAADLERVLTLFPRLKERLTQRGGTLSGGEQQ 146