BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0068.0002.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772313.1| ABC transporter ATP-binding protein [Bradyrhizo... 491 e-137 ref|YP_780578.1| ABC transporter-like protein [Rhodopseudomonas ... 455 e-126 ref|ZP_01046569.1| ABC transporter, ATPase subunit [Nitrobacter ... 451 e-125 ref|YP_318817.1| ABC transporter, ATPase subunit [Nitrobacter wi... 450 e-125 ref|YP_531501.1| ABC transporter-like protein [Rhodopseudomonas ... 445 e-123 >ref|NP_772313.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50938.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 277 Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust. Identities = 238/277 (85%), Positives = 254/277 (91%) Query: 1 MSGDHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSG 60 MSGD IL VDRL MRFGGIVAV +LS +AER+KITALIGPNGAGKTTVFNCITGFY+PSG Sbjct: 1 MSGDKILNVDRLTMRFGGIVAVQDLSLSAERKKITALIGPNGAGKTTVFNCITGFYKPSG 60 Query: 61 GAIRLAHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRAS 120 G IRL HDDGRTI LERLNDFRI+K AKVARTFQNIRLFPGMTALENLMVAQHNALMRAS Sbjct: 61 GTIRLTHDDGRTIALERLNDFRIAKLAKVARTFQNIRLFPGMTALENLMVAQHNALMRAS 120 Query: 121 GLTLLGLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCT 180 GLT LGL+G P +R+AE+RAIDLA WL RV LLDRADDAAGN YGDQRRLEIARAMCT Sbjct: 121 GLTFLGLIGAPGYRDAEKRAIDLATDWLRRVNLLDRADDAAGNFAYGDQRRLEIARAMCT 180 Query: 181 EPVLLCLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYG 240 EP LLCLDEPAAGLNARES L+ELLLSIRNE GTSILLIEHDMSVVMEISDH+VVMD+G Sbjct: 181 EPALLCLDEPAAGLNARESAALSELLLSIRNELGTSILLIEHDMSVVMEISDHIVVMDHG 240 Query: 241 VKIAEGTPQTVRDDPKVIAAYLGADEEEAIAVMESGT 277 VKIAEG+P+ VRDDPKVIAAYLGADEEEA+AVMESG+ Sbjct: 241 VKIAEGSPRAVRDDPKVIAAYLGADEEEAVAVMESGS 277 >ref|YP_780578.1| ABC transporter-like protein [Rhodopseudomonas palustris BisA53] gb|ABJ05598.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 279 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 221/270 (81%), Positives = 240/270 (88%) Query: 3 GDHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSGGA 62 GDHIL VD L MRFGGIVAV LSFAA +ITALIGPNGAGKTTVFNCITGFY+PS G+ Sbjct: 4 GDHILVVDDLAMRFGGIVAVGGLSFAARHGEITALIGPNGAGKTTVFNCITGFYKPSAGS 63 Query: 63 IRLAHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGL 122 IRL+H+DG + QLERLND+RISK AKVARTFQNIRLFPGMTALENLMVAQHNALMRASG Sbjct: 64 IRLSHNDGSSYQLERLNDYRISKLAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGF 123 Query: 123 TLLGLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCTEP 182 TLLGL G+PSWR AE RAI+L+R WL R+GLL RADDAAGNLPYGDQRRLEIARAMCT P Sbjct: 124 TLLGLFGVPSWRAAENRAIELSRYWLDRIGLLARADDAAGNLPYGDQRRLEIARAMCTTP 183 Query: 183 VLLCLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYGVK 242 LLCLDEPAAGLNARES GL+ELL +IR E GTSILLIEHDMSVVMEISDHVVV+D+GVK Sbjct: 184 ALLCLDEPAAGLNARESAGLSELLQAIRAEHGTSILLIEHDMSVVMEISDHVVVLDHGVK 243 Query: 243 IAEGTPQTVRDDPKVIAAYLGADEEEAIAV 272 IA+GTP+ VRDD KVIAAYLG ++EE AV Sbjct: 244 IADGTPRAVRDDAKVIAAYLGVEDEEVAAV 273 >ref|ZP_01046569.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A] gb|EAQ35405.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A] Length = 278 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 219/271 (80%), Positives = 241/271 (88%) Query: 6 ILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSGGAIRL 65 IL+VD L MRFGGI+A+NELSF A+RR ITALIGPNGAGKTTVFNC+TGFYRPS GA+RL Sbjct: 7 ILSVDGLTMRFGGILAINELSFTAQRRHITALIGPNGAGKTTVFNCVTGFYRPSQGAMRL 66 Query: 66 AHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGLTLL 125 HDDG T +L+RL DFRI K AKVARTFQNIRLFPGMTALENLMVAQHN LMRASG LL Sbjct: 67 VHDDGATFRLDRLRDFRICKYAKVARTFQNIRLFPGMTALENLMVAQHNVLMRASGFGLL 126 Query: 126 GLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCTEPVLL 185 GL+G PS+R AE++AID AR WL R+GLL RADDAAGNL YGDQRRLEIARAMC P LL Sbjct: 127 GLIGAPSFRSAERQAIDSARNWLDRIGLLQRADDAAGNLAYGDQRRLEIARAMCAHPALL 186 Query: 186 CLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYGVKIAE 245 CLDEPAAGLNA ES GL+ELLLSIR++ GTSILLIEHDMSVVMEISDH+VV+D+GVKIA+ Sbjct: 187 CLDEPAAGLNANESAGLSELLLSIRSDFGTSILLIEHDMSVVMEISDHIVVLDHGVKIAD 246 Query: 246 GTPQTVRDDPKVIAAYLGADEEEAIAVMESG 276 GTP+ VRDDPKVIAAYLGADE+ A AVMESG Sbjct: 247 GTPRAVRDDPKVIAAYLGADEDTAAAVMESG 277 >ref|YP_318817.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255] gb|ABA05465.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 217/269 (80%), Positives = 242/269 (89%) Query: 6 ILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSGGAIRL 65 IL VD L MRFGGI+A+NELSF A+RR ITALIGPNGAGKTTVFNC+TGFYRPS GA+RL Sbjct: 7 ILDVDGLTMRFGGILAINELSFTAQRRHITALIGPNGAGKTTVFNCVTGFYRPSRGAMRL 66 Query: 66 AHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGLTLL 125 HDDG T +L+RL DFRI K AKVARTFQNIRLFPGMTALENLMVAQHNALMRASG +LL Sbjct: 67 VHDDGATFRLDRLRDFRICKYAKVARTFQNIRLFPGMTALENLMVAQHNALMRASGFSLL 126 Query: 126 GLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCTEPVLL 185 GL+G PS+R AE++AID AR WL R+GLL RADDAAGNLPYGDQRRLEIARAMC +P LL Sbjct: 127 GLIGAPSFRAAEKQAIDSARDWLDRIGLLQRADDAAGNLPYGDQRRLEIARAMCAQPALL 186 Query: 186 CLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYGVKIAE 245 CLDEPAAGLNA ES GL+ELLLSIR++ GTSILLIEHDMSVVMEISDH++V+D+GVKIA+ Sbjct: 187 CLDEPAAGLNANESAGLSELLLSIRSDFGTSILLIEHDMSVVMEISDHIIVLDHGVKIAD 246 Query: 246 GTPQTVRDDPKVIAAYLGADEEEAIAVME 274 GTP+ VRDDPKV+AAYLGADE+ A AVME Sbjct: 247 GTPRAVRDDPKVVAAYLGADEDTAAAVME 275 >ref|YP_531501.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18] gb|ABD87182.1| ABC transporter related [Rhodopseudomonas palustris BisB18] Length = 278 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 217/272 (79%), Positives = 236/272 (86%) Query: 1 MSGDHILTVDRLMMRFGGIVAVNELSFAAERRKITALIGPNGAGKTTVFNCITGFYRPSG 60 MSGD IL VD L MRFGGIVAVN LSF A +ITALIGPNGAGKTTVFNCITGFY+P+G Sbjct: 1 MSGDPILAVDSLAMRFGGIVAVNGLSFVARHGEITALIGPNGAGKTTVFNCITGFYKPTG 60 Query: 61 GAIRLAHDDGRTIQLERLNDFRISKQAKVARTFQNIRLFPGMTALENLMVAQHNALMRAS 120 G IRL H DG + QL+RLNDFRISK AKVARTFQNIRLFPGMTALENLMVAQHN LMRAS Sbjct: 61 GTIRLTHADGNSFQLQRLNDFRISKIAKVARTFQNIRLFPGMTALENLMVAQHNVLMRAS 120 Query: 121 GLTLLGLLGLPSWREAEQRAIDLARTWLARVGLLDRADDAAGNLPYGDQRRLEIARAMCT 180 G+T LGL+G PSWR AE AI+ AR WL R+GLL+RAD+AAGNLPYGDQRRLEIARAMCT Sbjct: 121 GVTFLGLIGAPSWRSAEADAIEFARFWLKRIGLLERADEAAGNLPYGDQRRLEIARAMCT 180 Query: 181 EPVLLCLDEPAAGLNARESGGLNELLLSIRNEQGTSILLIEHDMSVVMEISDHVVVMDYG 240 P LLCLDEPAAGLNARES L+ELL+SIR E TSILLIEHDMSVVMEISDHVVV+DYG Sbjct: 181 VPALLCLDEPAAGLNARESASLSELLMSIRAEGKTSILLIEHDMSVVMEISDHVVVLDYG 240 Query: 241 VKIAEGTPQTVRDDPKVIAAYLGADEEEAIAV 272 VKIA+GTPQ VRDD +VIAAYLG +++E AV Sbjct: 241 VKIADGTPQHVRDDARVIAAYLGVEDDEVAAV 272