BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0068.0001.p         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_568915.1| inner-membrane translocator [Rhodopseudomonas p...   191   4e-47
ref|YP_004107889.1| inner-membrane translocator [Rhodopseudomona...   189   9e-47
ref|NP_949144.1| inner-membrane translocator [Rhodopseudomonas p...   189   1e-46
ref|YP_531502.1| inner-membrane translocator [Rhodopseudomonas p...   186   8e-46
ref|NP_772312.1| ABC transporter permease protein [Bradyrhizobiu...   183   6e-45

>ref|YP_568915.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gb|ABE39014.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 444

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 98/100 (98%)

Query: 12  TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTMIGGFELFRGLDQYRMLVFG 71
           TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALT+IGGFELFRGLDQ+RMLVFG
Sbjct: 345 TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTLIGGFELFRGLDQFRMLVFG 404

Query: 72  MAMVLLMIWRPRGLIGHRAPTVFLERNQAISSDLVKEGHG 111
           ++MV LM+WRPRGLIGHRAPTV+LERNQ ISSDLVKEGHG
Sbjct: 405 LSMVFLMVWRPRGLIGHRAPTVYLERNQTISSDLVKEGHG 444


>ref|YP_004107889.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
 gb|ADU43156.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1]
          Length = 442

 Score =  189 bits (481), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 93/100 (93%), Positives = 98/100 (98%)

Query: 12  TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTMIGGFELFRGLDQYRMLVFG 71
           TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAA+T+IGGFELFRGLDQ+RMLVFG
Sbjct: 343 TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVTLIGGFELFRGLDQFRMLVFG 402

Query: 72  MAMVLLMIWRPRGLIGHRAPTVFLERNQAISSDLVKEGHG 111
           MAMVLLMIWRPRGLIGHRAPTV+L+  QAISSDLVKEGHG
Sbjct: 403 MAMVLLMIWRPRGLIGHRAPTVYLQHKQAISSDLVKEGHG 442


>ref|NP_949144.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009]
 ref|YP_001993302.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
 emb|CAE29248.1| putative permease of ABC transporter (high-affinity branched-chain
           amino acid transport) [Rhodopseudomonas palustris
           CGA009]
 gb|ACF02827.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1]
          Length = 443

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/100 (93%), Positives = 98/100 (98%)

Query: 12  TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTMIGGFELFRGLDQYRMLVFG 71
           TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAA+T+IGGFELFRGLDQ+RMLVFG
Sbjct: 344 TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVTLIGGFELFRGLDQFRMLVFG 403

Query: 72  MAMVLLMIWRPRGLIGHRAPTVFLERNQAISSDLVKEGHG 111
           MAMVLLMIWRPRGLIGHRAPTV+L+  QAISSDLVKEGHG
Sbjct: 404 MAMVLLMIWRPRGLIGHRAPTVYLDHKQAISSDLVKEGHG 443


>ref|YP_531502.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
 gb|ABD87183.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18]
          Length = 445

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 93/99 (93%), Positives = 96/99 (96%)

Query: 12  TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTMIGGFELFRGLDQYRMLVFG 71
           TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAA+ MIGGFELFRGLDQYRMLVFG
Sbjct: 347 TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAVAMIGGFELFRGLDQYRMLVFG 406

Query: 72  MAMVLLMIWRPRGLIGHRAPTVFLERNQAISSDLVKEGH 110
           +AMVLLMIWRPRGLIGHRAPTVFLE N+AISSDLVKEG 
Sbjct: 407 LAMVLLMIWRPRGLIGHRAPTVFLEHNRAISSDLVKEGR 445


>ref|NP_772312.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC50937.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 441

 Score =  183 bits (465), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 90/100 (90%), Positives = 95/100 (95%)

Query: 12  TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALTMIGGFELFRGLDQYRMLVFG 71
           TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAAL MIGGFELFR L+ YRMLVFG
Sbjct: 342 TRQGFISPESFTFQESALVLAIVVLGGMGSQLGVALAALAMIGGFELFRSLETYRMLVFG 401

Query: 72  MAMVLLMIWRPRGLIGHRAPTVFLERNQAISSDLVKEGHG 111
           MAMVL+MIWRPRGL+GHRAPTV+L + QAISSDLVKEGHG
Sbjct: 402 MAMVLIMIWRPRGLVGHRAPTVYLTKAQAISSDLVKEGHG 441