BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0067.0012.p (506 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238851.1| putative beta-lactamase [Bradyrhizobium sp. ... 582 e-164 ref|YP_001204528.1| putative beta-lactamase [Bradyrhizobium sp. ... 581 e-164 ref|NP_769438.1| hypothetical protein bll2798 [Bradyrhizobium ja... 578 e-163 ref|YP_577943.1| beta-lactamase [Nitrobacter hamburgensis X14] >... 565 e-159 gb|AEM45130.1| hypothetical protein [uncultured organism] 547 e-153 >ref|YP_001238851.1| putative beta-lactamase [Bradyrhizobium sp. BTAi1] gb|ABQ34945.1| putative beta-lactamase [Bradyrhizobium sp. BTAi1] Length = 424 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 281/330 (85%), Positives = 303/330 (91%) Query: 177 VALDEPVAKYIPEWKNLGVFVAGTAPAFLTRPPTRPMQIVDLLRHTSGLTYGFQQRSNVD 236 VALDEPVAKYIPEW+NLGVFVAGTAPAF++RPPTRPM IVDLLRHTSGLTYGFQQRSNVD Sbjct: 95 VALDEPVAKYIPEWRNLGVFVAGTAPAFISRPPTRPMLIVDLLRHTSGLTYGFQQRSNVD 154 Query: 237 AAYREKKIGEVIKAGTLDGMIEDLAKIPLEFSPGEAWNYSVSTDVLGYLVGKISGVRFEQ 296 AAYRE KIG V KAGTL MI+DLA+IPLEFSPGEAWNYSVSTDV+GYLVGKI+ FEQ Sbjct: 155 AAYREAKIGAVEKAGTLQSMIDDLARIPLEFSPGEAWNYSVSTDVIGYLVGKIADKPFEQ 214 Query: 297 FLKERIFKPLGMNDTDFFVPADKAHRFAACYSADPQGGFNPLAAERKGTLTLQDDPTTSS 356 FLKERIF PLGM DTDF VPA KAHR AACYSAD G + AA+RKG LTLQDDP TSS Sbjct: 215 FLKERIFDPLGMTDTDFHVPATKAHRLAACYSADAGGALSFHAADRKGGLTLQDDPATSS 274 Query: 357 FLAPPSLISGGGGLCSTAADYLTFCRALLNGGELGGVRLLGPKTLKLMTSNHLPGGVDLP 416 FL+PP ISGGGGLC+T ADYLTFCRAL+NGGE+GGVRLLGPKTLKLMTSNHLPGGVDLP Sbjct: 275 FLSPPDFISGGGGLCATTADYLTFCRALINGGEVGGVRLLGPKTLKLMTSNHLPGGVDLP 334 Query: 417 AMSRSMFAEAAYNGIGFGLGFAVTMHPAQTLIAGSPGEFNWGGAATTSFFIDPAEELITI 476 A+SRSMFAEAAYNGIGFGLGF+VTM PA+TLIAGSPGE+ WGGAA+T+F+IDPAEELITI Sbjct: 335 ALSRSMFAEAAYNGIGFGLGFSVTMDPAKTLIAGSPGEYAWGGAASTAFWIDPAEELITI 394 Query: 477 FMTQVLPSSAYPLRRELRTMVYAAITESNL 506 FMTQVLPS+AYP+RRELRTMVYAAITESNL Sbjct: 395 FMTQVLPSNAYPIRRELRTMVYAAITESNL 424 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/102 (63%), Positives = 85/102 (83%) Query: 1 MSTTALNRLEAHLKSRYIDAGRFPGTQVLIYRRGKIVHSTVQGFADLERKVPVKDDTIFR 60 MS AL+R++AHL+ RY++AGRFPGTQ+L+YRRGKIVH++ G+AD+ERKVPVKDDTI+R Sbjct: 14 MSKAALDRIDAHLRDRYVEAGRFPGTQLLVYRRGKIVHASSLGYADVERKVPVKDDTIYR 73 Query: 61 IFSMTKPIVSVGIMQLLEDGHFLLNDPVAKFIPEFAETKVGV 102 I+SMTKPI SV M L+E+G L++PVAK+IPE+ V V Sbjct: 74 IYSMTKPITSVAFMMLVEEGKVALDEPVAKYIPEWRNLGVFV 115 >ref|YP_001204528.1| putative beta-lactamase [Bradyrhizobium sp. ORS 278] emb|CAL76291.1| putative beta-lactamase [Bradyrhizobium sp. ORS 278] Length = 445 Score = 581 bits (1498), Expect = e-164, Method: Compositional matrix adjust. Identities = 280/330 (84%), Positives = 302/330 (91%) Query: 177 VALDEPVAKYIPEWKNLGVFVAGTAPAFLTRPPTRPMQIVDLLRHTSGLTYGFQQRSNVD 236 VALDEPVAKYIPEWKNLGVFVAGTAPAF++RPP RPM IVDLLRHTSGLTYGFQQRSNVD Sbjct: 116 VALDEPVAKYIPEWKNLGVFVAGTAPAFISRPPARPMLIVDLLRHTSGLTYGFQQRSNVD 175 Query: 237 AAYREKKIGEVIKAGTLDGMIEDLAKIPLEFSPGEAWNYSVSTDVLGYLVGKISGVRFEQ 296 AAYR+ KIG V KAGTL MI+DLAKIPLEFSPGEAWNYSVSTDV+GYLVGKI+ FEQ Sbjct: 176 AAYRDAKIGAVEKAGTLQSMIDDLAKIPLEFSPGEAWNYSVSTDVVGYLVGKIADKPFEQ 235 Query: 297 FLKERIFKPLGMNDTDFFVPADKAHRFAACYSADPQGGFNPLAAERKGTLTLQDDPTTSS 356 FLKERIF PLGM DTDF VPA KAHR AACYSADP G + AA+RKG LTLQDDP TS+ Sbjct: 236 FLKERIFDPLGMADTDFHVPASKAHRLAACYSADPAGMMSFHAADRKGGLTLQDDPATST 295 Query: 357 FLAPPSLISGGGGLCSTAADYLTFCRALLNGGELGGVRLLGPKTLKLMTSNHLPGGVDLP 416 FL+PP ISGGGGLC+T ADYLT CRAL+NGGELGGVRLLGPKTLKLMTSNHLPGGVDLP Sbjct: 296 FLSPPDFISGGGGLCATTADYLTLCRALINGGELGGVRLLGPKTLKLMTSNHLPGGVDLP 355 Query: 417 AMSRSMFAEAAYNGIGFGLGFAVTMHPAQTLIAGSPGEFNWGGAATTSFFIDPAEELITI 476 A+SRSMFAEAAYNGIGFGLGF+VTM PA+TLIAGSPGE+ WGGAA+T+F+IDPAEELITI Sbjct: 356 ALSRSMFAEAAYNGIGFGLGFSVTMDPAKTLIAGSPGEYAWGGAASTAFWIDPAEELITI 415 Query: 477 FMTQVLPSSAYPLRRELRTMVYAAITESNL 506 FMTQVLPSSAYP+RRELR+MVYAAI+ESNL Sbjct: 416 FMTQVLPSSAYPIRRELRSMVYAAISESNL 445 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 63/102 (61%), Positives = 82/102 (80%) Query: 1 MSTTALNRLEAHLKSRYIDAGRFPGTQVLIYRRGKIVHSTVQGFADLERKVPVKDDTIFR 60 MS AL+R++AHL+ RY+DAGRFPGTQ+++YRRGKIVH + G+AD+ERKVPV D TI+R Sbjct: 35 MSKAALDRIDAHLQQRYVDAGRFPGTQLMVYRRGKIVHQSSLGYADVERKVPVTDQTIYR 94 Query: 61 IFSMTKPIVSVGIMQLLEDGHFLLNDPVAKFIPEFAETKVGV 102 I+SMTKPI SV M L+E+G L++PVAK+IPE+ V V Sbjct: 95 IYSMTKPITSVAFMMLVEEGKVALDEPVAKYIPEWKNLGVFV 136 >ref|NP_769438.1| hypothetical protein bll2798 [Bradyrhizobium japonicum USDA 110] dbj|BAC48063.1| bll2798 [Bradyrhizobium japonicum USDA 110] Length = 424 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 281/331 (84%), Positives = 302/331 (91%) Query: 176 VVALDEPVAKYIPEWKNLGVFVAGTAPAFLTRPPTRPMQIVDLLRHTSGLTYGFQQRSNV 235 +VA+DEPVAKYIPEWK+LGVFVAGTAPAFLTRPP+RPM IVDLLRHTSGLTYGFQQRSNV Sbjct: 94 LVAIDEPVAKYIPEWKDLGVFVAGTAPAFLTRPPSRPMLIVDLLRHTSGLTYGFQQRSNV 153 Query: 236 DAAYREKKIGEVIKAGTLDGMIEDLAKIPLEFSPGEAWNYSVSTDVLGYLVGKISGVRFE 295 DAAYR +KIGEV K+GTL MIE LAKIPLEFSPGEAWNYSV+TDVLGYLVGKISG+ FE Sbjct: 154 DAAYRAEKIGEVEKSGTLQTMIEALAKIPLEFSPGEAWNYSVATDVLGYLVGKISGMPFE 213 Query: 296 QFLKERIFKPLGMNDTDFFVPADKAHRFAACYSADPQGGFNPLAAERKGTLTLQDDPTTS 355 QFLK RI PLGM DTDF VPA KAHRFAACYSADP GG A +R+ LTLQDDP TS Sbjct: 214 QFLKARILDPLGMTDTDFHVPASKAHRFAACYSADPGGGMTFHAGQRREGLTLQDDPATS 273 Query: 356 SFLAPPSLISGGGGLCSTAADYLTFCRALLNGGELGGVRLLGPKTLKLMTSNHLPGGVDL 415 SFL+PPS ISGGGGLCSTAADYLTFCRALLNGGELGGVRL+GPKTL LMT+NH+PGG L Sbjct: 274 SFLSPPSFISGGGGLCSTAADYLTFCRALLNGGELGGVRLIGPKTLALMTTNHIPGGRFL 333 Query: 416 PAMSRSMFAEAAYNGIGFGLGFAVTMHPAQTLIAGSPGEFNWGGAATTSFFIDPAEELIT 475 P +SRS+F+EA YNGIGFGLGFAVTM PA+TLIAGSPGE+NWGGAATTSF+IDPAEELIT Sbjct: 334 PEVSRSLFSEATYNGIGFGLGFAVTMRPAETLIAGSPGEYNWGGAATTSFWIDPAEELIT 393 Query: 476 IFMTQVLPSSAYPLRRELRTMVYAAITESNL 506 IFMTQVLPSSAYPLRRELR+MVYAAITESNL Sbjct: 394 IFMTQVLPSSAYPLRRELRSMVYAAITESNL 424 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/102 (65%), Positives = 86/102 (84%) Query: 1 MSTTALNRLEAHLKSRYIDAGRFPGTQVLIYRRGKIVHSTVQGFADLERKVPVKDDTIFR 60 MS AL+R++AHLK+RYIDAGRFPGTQ+L+YRRGKI HS+VQG AD+ RKVPVKDDTI+R Sbjct: 14 MSKAALDRVDAHLKNRYIDAGRFPGTQLLVYRRGKIAHSSVQGLADVARKVPVKDDTIYR 73 Query: 61 IFSMTKPIVSVGIMQLLEDGHFLLNDPVAKFIPEFAETKVGV 102 I+SMTKP+ SV M L+E+G +++PVAK+IPE+ + V V Sbjct: 74 IYSMTKPLTSVAFMMLVEEGLVAIDEPVAKYIPEWKDLGVFV 115 >ref|YP_577943.1| beta-lactamase [Nitrobacter hamburgensis X14] gb|ABE63483.1| beta-lactamase [Nitrobacter hamburgensis X14] Length = 424 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 272/331 (82%), Positives = 295/331 (89%) Query: 176 VVALDEPVAKYIPEWKNLGVFVAGTAPAFLTRPPTRPMQIVDLLRHTSGLTYGFQQRSNV 235 +VALDEPV KYIPEWKNLGVF AGTAPAF+TRPP RPMQIVDLLRHTSGLTYGFQQRSNV Sbjct: 94 LVALDEPVHKYIPEWKNLGVFQAGTAPAFMTRPPARPMQIVDLLRHTSGLTYGFQQRSNV 153 Query: 236 DAAYREKKIGEVIKAGTLDGMIEDLAKIPLEFSPGEAWNYSVSTDVLGYLVGKISGVRFE 295 DAAYR+++IG + AGTLD MI DLA IPLEFSPGEAWNYSVSTDV+GYLVGKISG+ FE Sbjct: 154 DAAYRDRQIGTIEMAGTLDSMIADLADIPLEFSPGEAWNYSVSTDVIGYLVGKISGIPFE 213 Query: 296 QFLKERIFKPLGMNDTDFFVPADKAHRFAACYSADPQGGFNPLAAERKGTLTLQDDPTTS 355 QFLKERIF PLGM DTDFFVPADK HR AACY+A G + + KG+L LQDDP TS Sbjct: 214 QFLKERIFNPLGMADTDFFVPADKTHRLAACYNATAAGMTSFHSPNAKGSLALQDDPATS 273 Query: 356 SFLAPPSLISGGGGLCSTAADYLTFCRALLNGGELGGVRLLGPKTLKLMTSNHLPGGVDL 415 SFL+PP ISGGGGLCSTAADYLTFCRALLNGGELGGVRL+GPKTL LMT+NHLPG DL Sbjct: 274 SFLSPPEFISGGGGLCSTAADYLTFCRALLNGGELGGVRLIGPKTLALMTTNHLPGNRDL 333 Query: 416 PAMSRSMFAEAAYNGIGFGLGFAVTMHPAQTLIAGSPGEFNWGGAATTSFFIDPAEELIT 475 P MSRSMFAEA+Y+GIGFGLGF+VTM PA+TLI GSPGE+ WGGAATTSF+IDPAEELI Sbjct: 334 PEMSRSMFAEASYSGIGFGLGFSVTMDPAKTLIPGSPGEYAWGGAATTSFWIDPAEELIA 393 Query: 476 IFMTQVLPSSAYPLRRELRTMVYAAITESNL 506 IFMTQVLPSSAYP+RRELRTMVYAAIT+SNL Sbjct: 394 IFMTQVLPSSAYPIRRELRTMVYAAITDSNL 424 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 66/100 (66%), Positives = 80/100 (80%) Query: 1 MSTTALNRLEAHLKSRYIDAGRFPGTQVLIYRRGKIVHSTVQGFADLERKVPVKDDTIFR 60 MS AL+R++ HLK RYIDAGRFPGTQ+++YRRG IVHS VQG ADLER+VP+KDDTIFR Sbjct: 14 MSKAALDRIDDHLKRRYIDAGRFPGTQLVVYRRGNIVHSAVQGLADLERQVPMKDDTIFR 73 Query: 61 IFSMTKPIVSVGIMQLLEDGHFLLNDPVAKFIPEFAETKV 100 I+SMTKPI SV M L+E G L++PV K+IPE+ V Sbjct: 74 IYSMTKPITSVAFMMLVEQGLVALDEPVHKYIPEWKNLGV 113 >gb|AEM45130.1| hypothetical protein [uncultured organism] Length = 424 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 262/330 (79%), Positives = 289/330 (87%) Query: 177 VALDEPVAKYIPEWKNLGVFVAGTAPAFLTRPPTRPMQIVDLLRHTSGLTYGFQQRSNVD 236 VAL+EPV +YIPEWKNLGVF AG PAFLTRPP++PMQIVDL+RHTSGLTYGFQQRSNVD Sbjct: 95 VALEEPVHRYIPEWKNLGVFQAGVWPAFLTRPPSKPMQIVDLMRHTSGLTYGFQQRSNVD 154 Query: 237 AAYREKKIGEVIKAGTLDGMIEDLAKIPLEFSPGEAWNYSVSTDVLGYLVGKISGVRFEQ 296 AAYRE KIGE+ KAGTL MI DLAK+PLEFSPGEAWNYSVSTDV+GYL+G ISG FEQ Sbjct: 155 AAYRELKIGEIEKAGTLSSMIADLAKVPLEFSPGEAWNYSVSTDVIGYLIGVISGKPFEQ 214 Query: 297 FLKERIFKPLGMNDTDFFVPADKAHRFAACYSADPQGGFNPLAAERKGTLTLQDDPTTSS 356 FL+ERIF PLGMNDT FFVP DKAHR AACYSA QG A +RKG LTLQDDP TSS Sbjct: 215 FLQERIFDPLGMNDTGFFVPPDKAHRLAACYSASSQGAMTFHATDRKGGLTLQDDPATSS 274 Query: 357 FLAPPSLISGGGGLCSTAADYLTFCRALLNGGELGGVRLLGPKTLKLMTSNHLPGGVDLP 416 FL+PPS ISGGGGLCST+ADYLTFCRALLNGGEL GVRL+GPKTL LMTSNHLPGG LP Sbjct: 275 FLSPPSFISGGGGLCSTSADYLTFCRALLNGGELDGVRLIGPKTLALMTSNHLPGGRTLP 334 Query: 417 AMSRSMFAEAAYNGIGFGLGFAVTMHPAQTLIAGSPGEFNWGGAATTSFFIDPAEELITI 476 +SRS+F+EA Y+GIGFGLG +VT+ PAQTLI GS GE+ WGGAATTSF+IDP EELI I Sbjct: 335 ELSRSLFSEATYHGIGFGLGVSVTLDPAQTLIPGSAGEYAWGGAATTSFWIDPVEELIAI 394 Query: 477 FMTQVLPSSAYPLRRELRTMVYAAITESNL 506 FMTQVLPS+A P+RRELRTM+Y+AIT+SNL Sbjct: 395 FMTQVLPSTATPIRRELRTMIYSAITDSNL 424 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 60/100 (60%), Positives = 77/100 (77%) Query: 1 MSTTALNRLEAHLKSRYIDAGRFPGTQVLIYRRGKIVHSTVQGFADLERKVPVKDDTIFR 60 MS TA R+E HL+ RYI+AGRFPGTQ+ + RRG++VH +VQG AD+ERKV VKDDTIFR Sbjct: 14 MSKTAFERIENHLRLRYIEAGRFPGTQLTVCRRGQLVHRSVQGLADIERKVAVKDDTIFR 73 Query: 61 IFSMTKPIVSVGIMQLLEDGHFLLNDPVAKFIPEFAETKV 100 I+SMTKPI S+ M L+E+G L +PV ++IPE+ V Sbjct: 74 IYSMTKPITSIAFMMLVEEGRVALEEPVHRYIPEWKNLGV 113