BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0067.0010.p (436 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_485379.1| twin-arginine translocation pathway signal [Rho... 785 0.0 ref|ZP_08629820.1| nitrate ABC transporter, nitrate-binding prot... 777 0.0 ref|YP_780197.1| ABC-type nitrate transport system periplasmic c... 775 0.0 ref|YP_001238853.1| ABC transporter nitrate-binding protein (nrt... 744 0.0 ref|NP_769443.1| ABC transporter nitrate-binding protein [Bradyr... 741 0.0 >ref|YP_485379.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] gb|ABD06468.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] Length = 434 Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/427 (88%), Positives = 404/427 (94%) Query: 9 SGHAINRRQFLKATSGAAALLAAAKLNFPAGAFAQGAGPEVKGAKLGFIALTDASPLFVA 68 +G ++RRQ LKA AAALLAAAKLN P GAFAQ GPEVKGAKLGFIALTDASPLFVA Sbjct: 7 TGSRVSRRQLLKAGGSAAALLAAAKLNLPGGAFAQEGGPEVKGAKLGFIALTDASPLFVA 66 Query: 69 KEKGIFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISAGKVTQNN 128 KEKGIFAKYGMPDVEV KQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISAGKVTQNN Sbjct: 67 KEKGIFAKYGMPDVEVLKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISAGKVTQNN 126 Query: 129 QPTPMYIMARLNLNGQCISVAKEYADLKVGIDTAPFKAALEKKKASGKAVKAAMTFPGGT 188 PTPMYI+ARLNLNGQCISVAKEYAD+KVG+DTAPFK ALEKKKASGKA+KAAMTFPGGT Sbjct: 127 VPTPMYILARLNLNGQCISVAKEYADIKVGLDTAPFKVALEKKKASGKAIKAAMTFPGGT 186 Query: 189 HDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQDIGYT 248 HDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQ+IGYT Sbjct: 187 HDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQNIGYT 246 Query: 249 AITTGELWDKHPEKSFGLRAAWVDKNPKAAKALLMAVMEAQQWCEKAENREEAAAICAKR 308 AITTGELW+KHPEKSFG+RAAWVDK PKAAKALLMAV+EAQQWC++ ENR+E AAICAKR Sbjct: 247 AITTGELWNKHPEKSFGMRAAWVDKYPKAAKALLMAVLEAQQWCDRPENRDEVAAICAKR 306 Query: 309 QWINCPVEDITDRMKGKFDYGTGRVVENSPQQMRFWSDNASYPYQSHDLWFLTEDIRWGK 368 QWINCPV+D+TDR+KGKFDYGTG+VVENSP M+FW D ASYPYQSHDLWF+TEDIRWGK Sbjct: 307 QWINCPVDDVTDRVKGKFDYGTGKVVENSPHIMKFWDDFASYPYQSHDLWFMTEDIRWGK 366 Query: 369 YEAGFDTKALIAKVNREDLWKEAAKELGVSDIPASTSRGKETFFDGKVFDPADPAAYLKS 428 YE GFD+KALIAKVNREDLWK+AAK LGVS +PASTSRG+ETFFDGKVFDPADPAAYLKS Sbjct: 367 YEPGFDSKALIAKVNREDLWKDAAKALGVSALPASTSRGQETFFDGKVFDPADPAAYLKS 426 Query: 429 LSIKRVD 435 LSIKRVD Sbjct: 427 LSIKRVD 433 >ref|ZP_08629820.1| nitrate ABC transporter, nitrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07463.1| nitrate ABC transporter, nitrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 441 Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/425 (88%), Positives = 401/425 (94%), Gaps = 2/425 (0%) Query: 13 INRRQFLKATSGAAALLAAAKLNFPAGAFAQGAGPEVKGAKLGFIALTDASPLFVAKEKG 72 ++RR LKA +G AA+LAAA+LNFP GAFAQ +GPEVKGAKLGFIALTDASPLFVAKEKG Sbjct: 16 MSRRALLKAGAGTAAMLAAARLNFPGGAFAQESGPEVKGAKLGFIALTDASPLFVAKEKG 75 Query: 73 IFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISAGKVTQNNQPTP 132 IFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS+GKVTQNN PTP Sbjct: 76 IFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISSGKVTQNNVPTP 135 Query: 133 MYIMARLNLNGQCISVAKEYADLKVGIDTAPFKAALEKKKASGKAVKAAMTFPGGTHDLW 192 MYI+ARLNLNGQCISV KEYADLK+G+DTAPFK ALEKKKASGK+VKAAMTFPGGTHDLW Sbjct: 136 MYILARLNLNGQCISVGKEYADLKIGVDTAPFKVALEKKKASGKSVKAAMTFPGGTHDLW 195 Query: 193 IRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQDIGYTAITT 252 IRYWLAAGGIDPDKDIETIVVPP QMVANMKVGTMD FCVCEPWNLQLIHQ+IGYTA+TT Sbjct: 196 IRYWLAAGGIDPDKDIETIVVPPAQMVANMKVGTMDAFCVCEPWNLQLIHQNIGYTALTT 255 Query: 253 GELWDKHPEKSFGLRAAWVDKNPKAAKALLMAVMEAQQWCEKAENREEAAAICAKRQWIN 312 GELWDKHPEKSFG+RAA+VDK PKAAKALLMAVMEAQQWCEK ENREE AAICAKRQWIN Sbjct: 256 GELWDKHPEKSFGMRAAYVDKYPKAAKALLMAVMEAQQWCEKMENREETAAICAKRQWIN 315 Query: 313 CPVEDITDRMKGKFDYGTGRVVENSPQQMRFWSDNASYPYQSHDLWFLTEDIRWGKYEAG 372 PVED+TDRMKGKFDYGTGRVVENSPQQMRFW D ASYP+QSHDLWF+TEDIRWGKYEAG Sbjct: 316 VPVEDVTDRMKGKFDYGTGRVVENSPQQMRFWKDQASYPFQSHDLWFITEDIRWGKYEAG 375 Query: 373 FDTKALIAKVNREDLWKEAAKELGV--SDIPASTSRGKETFFDGKVFDPADPAAYLKSLS 430 FD K++IAKVNREDLWK+AAK LGV +DIP S SRGKETFFDGKVFDP +PAAYLKSL+ Sbjct: 376 FDAKSIIAKVNREDLWKDAAKSLGVAAADIPTSKSRGKETFFDGKVFDPENPAAYLKSLA 435 Query: 431 IKRVD 435 IKRV+ Sbjct: 436 IKRVE 440 >ref|YP_780197.1| ABC-type nitrate transport system periplasmic component [Rhodopseudomonas palustris BisA53] gb|ABJ05217.1| ABC-type nitrate transport system periplasmic component [Rhodopseudomonas palustris BisA53] Length = 435 Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/433 (85%), Positives = 395/433 (91%), Gaps = 2/433 (0%) Query: 5 TNKPSGHAINRRQFLKATSGAAALLAAAKLNFPAGA-FAQGAGPEVKGAKLGFIALTDAS 63 T SG ++RR LKA+S AAL A FP G A PEVK AKLGFIALTDAS Sbjct: 4 TKNGSGKGLSRRSLLKASS-TAALFGAIGAQFPFGVHLAHADTPEVKAAKLGFIALTDAS 62 Query: 64 PLFVAKEKGIFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISAGK 123 PLFVAKEKG+FAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS+GK Sbjct: 63 PLFVAKEKGLFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLISSGK 122 Query: 124 VTQNNQPTPMYIMARLNLNGQCISVAKEYADLKVGIDTAPFKAALEKKKASGKAVKAAMT 183 VTQNNQPTPMYI+ARLNLNGQCISVAKEYADLKVG+D APFKAAL+KKKASGKA+KAAMT Sbjct: 123 VTQNNQPTPMYILARLNLNGQCISVAKEYADLKVGVDAAPFKAALDKKKASGKAIKAAMT 182 Query: 184 FPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQ 243 FPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQ Sbjct: 183 FPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQLIHQ 242 Query: 244 DIGYTAITTGELWDKHPEKSFGLRAAWVDKNPKAAKALLMAVMEAQQWCEKAENREEAAA 303 DIGYTA+TTGELW+KHPEKSF +RAA+VDK PKAAKALLMAV+EAQQWCEK ENR+E AA Sbjct: 243 DIGYTALTTGELWNKHPEKSFAMRAAYVDKYPKAAKALLMAVLEAQQWCEKPENRDEVAA 302 Query: 304 ICAKRQWINCPVEDITDRMKGKFDYGTGRVVENSPQQMRFWSDNASYPYQSHDLWFLTED 363 ICAKRQWINCPV D+TDR+KGKFDYGTGRVVENSP MRFW D ASYPYQSHDLWF+TED Sbjct: 303 ICAKRQWINCPVNDVTDRVKGKFDYGTGRVVENSPHIMRFWDDFASYPYQSHDLWFMTED 362 Query: 364 IRWGKYEAGFDTKALIAKVNREDLWKEAAKELGVSDIPASTSRGKETFFDGKVFDPADPA 423 IRWGKYE GFD+KALIAKVNREDLWK+AAK LGV+++PASTSRGKETFFDGKVFDP DP Sbjct: 363 IRWGKYEPGFDSKALIAKVNREDLWKDAAKTLGVTEMPASTSRGKETFFDGKVFDPEDPQ 422 Query: 424 AYLKSLSIKRVDV 436 AYLKSLSIKRV+V Sbjct: 423 AYLKSLSIKRVEV 435 >ref|YP_001238853.1| ABC transporter nitrate-binding protein (nrtA) [Bradyrhizobium sp. BTAi1] gb|ABQ34947.1| ABC transporter nitrate-binding protein (nrtA) [Bradyrhizobium sp. BTAi1] Length = 438 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/437 (82%), Positives = 397/437 (90%), Gaps = 2/437 (0%) Query: 1 MTKPTNKPSGHAINRRQFLKATSGAAALLAAAKLNFPAGAFAQGAGPEVKGAKLGFIALT 60 MTK N + ++RRQ LKA +G AALLAAAKLN P GAFAQGAGPEV AKLGFIAL+ Sbjct: 1 MTKTANPARRNGLSRRQLLKAGAGTAALLAAAKLNLPGGAFAQGAGPEVTSAKLGFIALS 60 Query: 61 DASPLFVAKEKGIFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS 120 DA PLFVAK+KG+FAKYGMPDV+VQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS Sbjct: 61 DAGPLFVAKDKGMFAKYGMPDVDVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS 120 Query: 121 AGKVTQNNQPTPMYIMARLNLNGQCISVAKEYADLKVGIDTAPFKAALEKKKASGKAVKA 180 +GKVTQNNQPTPMYI+ARLNL+ QCISVAKEYADLK+G+DTAPFKAALEKKKASGKAVKA Sbjct: 121 SGKVTQNNQPTPMYILARLNLDAQCISVAKEYADLKLGLDTAPFKAALEKKKASGKAVKA 180 Query: 181 AMTFPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQL 240 AMTFPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCV EPWN QL Sbjct: 181 AMTFPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVGEPWNAQL 240 Query: 241 IHQDIGYTAITTGELWDKHPEKSFGLRAAWVDKNPKAAKALLMAVMEAQQWCEKAENREE 300 ++Q IGYTA+TTGE+W+KHPEKSF +R+A+VDK PKAAKAL MAVMEAQQWC+K EN++E Sbjct: 241 VNQGIGYTAVTTGEIWNKHPEKSFAMRSAFVDKYPKAAKALTMAVMEAQQWCDKMENKQE 300 Query: 301 AAAICAKRQWINCPVEDITDRMKGKFDYGTGRVVENSPQQMRFWSDNASYPYQSHDLWFL 360 A I AKRQWINCPVED+ R GKFDYGTG+VVENSP M++WSD ASYP+QSHDLWF+ Sbjct: 301 LATIMAKRQWINCPVEDVAGRSAGKFDYGTGKVVENSPHIMKYWSDFASYPFQSHDLWFI 360 Query: 361 TEDIRWGKYEAGFDTKALIAKVNREDLWKEAAKELGV--SDIPASTSRGKETFFDGKVFD 418 TEDIRWGKYEAGFD KALIAKVNRED+W+EAAK++ V S+IP S SRGKETFFDGKVFD Sbjct: 361 TEDIRWGKYEAGFDAKALIAKVNREDIWREAAKDMNVAASEIPTSKSRGKETFFDGKVFD 420 Query: 419 PADPAAYLKSLSIKRVD 435 P DPAAYLKSLSIKRVD Sbjct: 421 PEDPAAYLKSLSIKRVD 437 >ref|NP_769443.1| ABC transporter nitrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48068.1| ABC transporter nitrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 439 Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/439 (82%), Positives = 392/439 (89%), Gaps = 3/439 (0%) Query: 1 MTKPTNKPSGHAINRRQFLKATSGAAALLAAAKLNFPAGAFAQGAGPEVKGAKLGFIALT 60 MTK +PS ++RRQ LKAT AALLAAAKLNFPAGAFAQ AGPEVKGAKLGFIAL+ Sbjct: 1 MTKRIRRPSDTGLSRRQLLKATGSTAALLAAAKLNFPAGAFAQDAGPEVKGAKLGFIALS 60 Query: 61 DASPLFVAKEKGIFAKYGMPDVEVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS 120 DA PLFVAK+KG+FAKYGMPDV+VQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS Sbjct: 61 DAGPLFVAKDKGLFAKYGMPDVDVQKQASWGTTRDNLVLGSEGNGIDGAHILTPMPYLIS 120 Query: 121 AGKVTQNNQPTPMYIMARLNLNGQCISVAKEYADLKVGIDTAPFKAALEKKKASGKAVKA 180 AGKVTQNNQPTPMYI+ARLNL+ QCISVAKEYADLKVG D + KAA EKKKA GK+ K Sbjct: 121 AGKVTQNNQPTPMYILARLNLDAQCISVAKEYADLKVGADASVLKAAFEKKKAEGKSAKV 180 Query: 181 AMTFPGGTHDLWIRYWLAAGGIDPDKDIETIVVPPPQMVANMKVGTMDCFCVCEPWNLQL 240 AMTFPGGTHDLW+RYWLAAGGIDPDKD+ETI VPPPQMVANMKVGTMD FCV EPW QL Sbjct: 181 AMTFPGGTHDLWVRYWLAAGGIDPDKDVETITVPPPQMVANMKVGTMDAFCVGEPWPGQL 240 Query: 241 IHQDIGYTAITTGELWDKHPEKSFGLRAAWVDKNPKAAKALLMAVMEAQQWCEKAENREE 300 +HQ IGYTA+ TGE+W KHPEKS G+RAAWVDKNPKAAKA+LMA+MEAQQW +K EN+EE Sbjct: 241 VHQGIGYTAVNTGEIWSKHPEKSLGMRAAWVDKNPKAAKAILMAIMEAQQWADKMENKEE 300 Query: 301 AAAICAKRQWINCPVEDITDRMKGKFDYGT-GRVVENSPQQMRFWSDNASYPYQSHDLWF 359 A I KRQWINCPVEDI DR KGKFDYG G+VVENSP M++W D+ASYP+QSHDLWF Sbjct: 301 LATIMGKRQWINCPVEDIADRAKGKFDYGNAGKVVENSPHIMKYWRDHASYPFQSHDLWF 360 Query: 360 LTEDIRWGKYEAGFDTKALIAKVNREDLWKEAAKELGV--SDIPASTSRGKETFFDGKVF 417 +TEDIRWGKYEAGFD+KALIAKVNREDLWK+AAK LGV SDIPASTSRGKETFFDGKVF Sbjct: 361 MTEDIRWGKYEAGFDSKALIAKVNREDLWKDAAKTLGVASSDIPASTSRGKETFFDGKVF 420 Query: 418 DPADPAAYLKSLSIKRVDV 436 DP +PAAYLKSL+IKRV+V Sbjct: 421 DPENPAAYLKSLAIKRVEV 439