BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0066.0087.p         (184 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_782111.1| flavin reductase domain-containing protein [Rho...   125   3e-27
gb|AAM12347.1| HpaC [Bradyrhizobium japonicum]                        123   1e-26
ref|NP_773930.1| monooxygenase HpaC [Bradyrhizobium japonicum US...   122   3e-26
ref|YP_002542010.1| nitrilotriacetate monooxygenase component B ...   122   3e-26
ref|NP_773647.1| oxidoreductase [Bradyrhizobium japonicum USDA 1...   121   4e-26

>ref|YP_782111.1| flavin reductase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gb|ABJ07131.1| flavin reductase domain protein, FMN-binding protein
           [Rhodopseudomonas palustris BisA53]
          Length = 190

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 1/160 (0%)

Query: 19  IDGASFKMALRNVSGSVSIVTSGRAPERHGLTVTAASSLSVDPSTVLVCVNKSAGAHDTI 78
           +    F+ A+R+++G VS+VT+G   ER+GLT T+ SSLS +P T++VC+N+ A A   I
Sbjct: 12  VPAQDFRAAMRHLAGGVSVVTAGSGSERNGLTATSVSSLSAEPPTLIVCINRQASAWPLI 71

Query: 79  VRTGCFGWNLLTASHVDLAQKFAGLDGSKGDIRFSEGSWAELVSGSPILIGSLCSFDCQV 138
            R   F  N+L +  +++ ++FAG DG KG+ RF+   W   V+G+P+L G+L + DC++
Sbjct: 72  ARHRAFAVNVLASEQIEIGERFAGKDGVKGEARFAGADWTTRVTGAPLLKGALAAIDCEL 131

Query: 139 IGMHPVGTHTVFFGAVLGEVHQDHYEGLIYRHGRF-AIPQ 177
                  TH +  G VL  V       L Y  GR+ AI Q
Sbjct: 132 EEAIERHTHLILIGRVLNVVSSPRSAALAYWQGRYVAIDQ 171


>gb|AAM12347.1| HpaC [Bradyrhizobium japonicum]
          Length = 204

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 1/162 (0%)

Query: 17  RLIDGASFKMALRNVSGSVSIVTSG-RAPERHGLTVTAASSLSVDPSTVLVCVNKSAGAH 75
           R +D   FK A+R  +G+V++VT G    +R GLTVT+A SLS +P +++VCVN++A AH
Sbjct: 21  REVDAKDFKQAMRQCAGAVALVTVGAEHGKRTGLTVTSACSLSDNPPSLIVCVNRNASAH 80

Query: 76  DTIVRTGCFGWNLLTASHVDLAQKFAGLDGSKGDIRFSEGSWAELVSGSPILIGSLCSFD 135
             I   G F  N L   H  LA  F+G  G  GD RF+ G W    +G+P+L  ++ +FD
Sbjct: 81  TRIREEGAFAINFLHEDHALLALTFSGQKGVNGDDRFAFGQWTRGATGAPVLTDAVAAFD 140

Query: 136 CQVIGMHPVGTHTVFFGAVLGEVHQDHYEGLIYRHGRFAIPQ 177
           C++       TH++F G V G  H D    L+Y    F +P 
Sbjct: 141 CELAQEFETKTHSIFVGEVRGVSHSDGAAPLVYLRSSFHVPH 182


>ref|NP_773930.1| monooxygenase HpaC [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52555.1| hpaC [Bradyrhizobium japonicum USDA 110]
          Length = 184

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 1/160 (0%)

Query: 19  IDGASFKMALRNVSGSVSIVTSG-RAPERHGLTVTAASSLSVDPSTVLVCVNKSAGAHDT 77
           +D   FK A+R  +G+V++VT G    +R GLTVT+A SLS +P +++VCVN++A AH  
Sbjct: 3   VDAKDFKQAMRQCAGAVALVTVGAEHGKRTGLTVTSACSLSDNPPSLIVCVNRNASAHTR 62

Query: 78  IVRTGCFGWNLLTASHVDLAQKFAGLDGSKGDIRFSEGSWAELVSGSPILIGSLCSFDCQ 137
           I   G F  N L   H  LA  F+G  G  GD RF+ G W    +G+P+L  ++ +FDC+
Sbjct: 63  IREEGAFAINFLHEDHALLALTFSGQKGVNGDDRFAFGQWTRGATGAPVLTDAVAAFDCE 122

Query: 138 VIGMHPVGTHTVFFGAVLGEVHQDHYEGLIYRHGRFAIPQ 177
           +       TH++F G V G  H D    L+Y    F +P 
Sbjct: 123 LAQEFETKTHSIFVGEVRGVSHSDGAAPLVYLRSSFHVPH 162


>ref|YP_002542010.1| nitrilotriacetate monooxygenase component B protein [Agrobacterium
           radiobacter K84]
 gb|ACM30413.1| nitrilotriacetate monooxygenase component B protein [Agrobacterium
           radiobacter K84]
          Length = 174

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 89/150 (59%)

Query: 24  FKMALRNVSGSVSIVTSGRAPERHGLTVTAASSLSVDPSTVLVCVNKSAGAHDTIVRTGC 83
           F+ A+R  +  V++VT+     + GLT TA  SLS +PST+L C+N+S+  +  I  +G 
Sbjct: 22  FRAAMREFAAGVTVVTTLSKDGKRGLTATAVCSLSAEPSTLLACINRSSDGYKAICESGF 81

Query: 84  FGWNLLTASHVDLAQKFAGLDGSKGDIRFSEGSWAELVSGSPILIGSLCSFDCQVIGMHP 143
           F  N+L A   ++A +FAG DG +G+ RF  G W  + +G+P L  +L  FDC+  G   
Sbjct: 82  FCVNVLAAEQSEVASRFAGRDGIRGERRFDLGDWHNMRTGAPALADALAVFDCRTAGTLD 141

Query: 144 VGTHTVFFGAVLGEVHQDHYEGLIYRHGRF 173
            G+HT+F G+V+    Q    GLIYR G F
Sbjct: 142 WGSHTIFIGSVVAARVQPGRPGLIYRAGSF 171


>ref|NP_773647.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52272.1| bll7007 [Bradyrhizobium japonicum USDA 110]
          Length = 193

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 94/152 (61%)

Query: 22  ASFKMALRNVSGSVSIVTSGRAPERHGLTVTAASSLSVDPSTVLVCVNKSAGAHDTIVRT 81
           A F+ A+R+++G VS++T+GR  +  G+TVT+ +SLSV+P T+LV +N+ A +   I R 
Sbjct: 17  ADFRGAMRHLTGGVSVITAGRGKDISGMTVTSVTSLSVEPPTLLVSINRDASSFPLIRRH 76

Query: 82  GCFGWNLLTASHVDLAQKFAGLDGSKGDIRFSEGSWAELVSGSPILIGSLCSFDCQVIGM 141
           G FG N+L A  +D+A++FAG  G KG  RF+   W   VSG P+L+G+L +FDC+V  +
Sbjct: 77  GAFGVNILNADQLDVAERFAGKGGLKGADRFAGARWVTAVSGVPLLVGALSAFDCEVEEI 136

Query: 142 HPVGTHTVFFGAVLGEVHQDHYEGLIYRHGRF 173
               +H +  G V           L Y HG++
Sbjct: 137 VERHSHGIVIGRVRDVRSSTRTAALAYWHGQY 168