BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0083.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003450608.1| branched-chain amino acid transport system A... 243 3e-62 ref|YP_421390.1| ABC-type branched-chain amino acid transport sy... 242 3e-62 ref|YP_421821.1| ABC-type branched-chain amino acid transport sy... 239 2e-61 ref|YP_003321118.1| ABC transporter-like protein [Sphaerobacter ... 239 2e-61 ref|ZP_00053196.2| COG0411: ABC-type branched-chain amino acid t... 239 3e-61 >ref|YP_003450608.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] dbj|BAI74064.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] Length = 242 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 132/237 (55%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 1 MTALLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGT 60 MTALLE+ +SKRF GL AV V FS+ E I AL+GPNGAGKTT FN+IAG F P G Sbjct: 1 MTALLEIERLSKRFRGLKAVSEVGFSVPEGCILALIGPNGAGKTTTFNLIAGVFPPDEGR 60 Query: 61 IRFEGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTRKVSEAREAALD 120 + +G+ ++G VC GIGRTFQIV+P +TV +N +VGA + R V AR A Sbjct: 61 VTLKGRNLTGLKPNLVCAAGIGRTFQIVKPFGQLTVEDNVVVGALARERSVEAARIQARV 120 Query: 121 TLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVL 180 LE + LA +AN LTLPDRK LE A+AL+TRP LLLLDEV+AGLRPTE +V VL Sbjct: 121 VLERLELADQANRPARSLTLPDRKRLEVARALATRPTLLLLDEVLAGLRPTEVDRMVEVL 180 Query: 181 RRLVER-GLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLG 236 R L R GLTI+++EHVMR VM ++ VVVL HG KIA+G P +V P V+ YLG Sbjct: 181 RDLNRREGLTILMIEHVMRAVMALSDRVVVLDHGEKIADGVPAEVVADPRVVESYLG 237 >ref|YP_421390.1| ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magneticum AMB-1] dbj|BAE50831.1| ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magneticum AMB-1] Length = 245 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/238 (54%), Positives = 162/238 (68%), Gaps = 2/238 (0%) Query: 2 TALLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTI 61 T +L + N+ K F GL AV+ V+F + I AL+GPNGAGKTT FN+IAGA P+ G + Sbjct: 5 TPMLSVENLGKSFRGLRAVNQVAFEVPRGDIVALIGPNGAGKTTTFNLIAGALPPSDGKV 64 Query: 62 RFEGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTR-KVSEAREAALD 120 +G I+G G A+CR G+GRTFQIV+P ++V EN MVGA V +AR A+ Sbjct: 65 VLDGHDITGLGQAAICRAGVGRTFQIVKPFAGLSVEENVMVGALRHDNGDVDKARAASRA 124 Query: 121 TLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVL 180 TL+ + L KA LTLPDRK LE AKAL+TRP+LLLLDEVMAGLRP E +V +L Sbjct: 125 TLDLLELGDKARDPAQTLTLPDRKRLEVAKALATRPKLLLLDEVMAGLRPVECDRMVAIL 184 Query: 181 RRL-VERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLGD 237 L E GLTI+L+EHVMR VM +++VVVLHHG KIAEG P + HP+VL YLG+ Sbjct: 185 TGLNKETGLTILLIEHVMRAVMALSDHVVVLHHGEKIAEGTPAEVTSHPKVLECYLGE 242 >ref|YP_421821.1| ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magneticum AMB-1] dbj|BAE51262.1| ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magneticum AMB-1] Length = 263 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 127/234 (54%), Positives = 158/234 (67%), Gaps = 1/234 (0%) Query: 4 LLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTIRF 63 LL + + K F GL AVDGVSFS+ + AL+GPNGAGKTT FNMIAG F P G I Sbjct: 26 LLLVEGLVKNFRGLRAVDGVSFSVAAGEVVALIGPNGAGKTTVFNMIAGVFEPDEGRIEM 85 Query: 64 EGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTRKVSEAREAALDTLE 123 EG ++ G + VCR GIGRTFQ+V+P +++V EN ++GA WT V +AR A + LE Sbjct: 86 EGASLVGLRPDQVCRTGIGRTFQLVKPFGNISVEENVLIGALRWTHDVDQARRRAREVLE 145 Query: 124 TVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVLRRL 183 +GLA K LTLPDRK LE A+AL+T P+LLLLDEVMAGLRP E +V RRL Sbjct: 146 LLGLADKRRQMARGLTLPDRKCLEVARALATGPKLLLLDEVMAGLRPAETDRMVETFRRL 205 Query: 184 V-ERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLG 236 E GLTI+L+EHVMR VM ++ VVV++ G + EGAP +V+ P VL YLG Sbjct: 206 NRETGLTIVLIEHVMRAVMALSQRVVVINTGKPVCEGAPEEVVRDPRVLECYLG 259 >ref|YP_003321118.1| ABC transporter-like protein [Sphaerobacter thermophilus DSM 20745] gb|ACZ40296.1| ABC transporter related protein [Sphaerobacter thermophilus DSM 20745] Length = 248 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 122/238 (51%), Positives = 166/238 (69%) Query: 3 ALLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTIR 62 ALLE++ V+KRFGGLLA V+F + I L+GPNGAGKTT FN I+G F PT GT+R Sbjct: 2 ALLEIDAVTKRFGGLLANHEVTFQVDRGEIVGLIGPNGAGKTTLFNCISGFFPPTSGTVR 61 Query: 63 FEGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTRKVSEAREAALDTL 122 F+G ++G AE + G+ RTFQ+VR D+TV EN M+GAF+ T S AR+ A + L Sbjct: 62 FDGTDVTGWPAERLVHRGMVRTFQVVRTFPDLTVRENVMIGAFARTNSASAARKIADEVL 121 Query: 123 ETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVLRR 182 E GLAP+A+ + L + +K +E A+AL+T P+LL+LDEVMAGL P E + ++R Sbjct: 122 EFTGLAPRADVLGANLPIAQKKRVELARALATGPQLLMLDEVMAGLTPAERVQAIELIRA 181 Query: 183 LVERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLGDGFR 240 + ERG+T++LVEHVM +VM ++ VVVL G KIAEG P I ++PEV+A YLG+ +R Sbjct: 182 IRERGITVLLVEHVMEVVMPISDRVVVLDSGKKIAEGPPQEIAENPEVIAAYLGEKYR 239 >ref|ZP_00053196.2| COG0411: ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magnetotacticum MS-1] Length = 246 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 127/238 (53%), Positives = 161/238 (67%), Gaps = 2/238 (0%) Query: 2 TALLELNNVSKRFGGLLAVDGVSFSLKERSITALVGPNGAGKTTCFNMIAGAFRPTVGTI 61 T +L + N+ K F GL AV+ V F++ I AL+GPNGAGKTT FN+IAGA P+ G + Sbjct: 6 TPMLSVENLGKSFRGLRAVNQVEFTVPRGDIVALIGPNGAGKTTTFNLIAGALPPSDGKV 65 Query: 62 RFEGKTISGRGAEAVCRLGIGRTFQIVRPMRDMTVLENAMVGAFSWTR-KVSEAREAALD 120 +G I+G G A+CR G+GRTFQIV+P ++V EN MVGA V +AR A+ Sbjct: 66 VLDGHDITGLGQAAICRAGVGRTFQIVKPFAGLSVEENVMVGALRHDNGDVEKARAASRA 125 Query: 121 TLETVGLAPKANASISQLTLPDRKMLETAKALSTRPRLLLLDEVMAGLRPTEAAAVVRVL 180 L+ + L +A LTLPDRK LE AKAL+TRP+LLLLDEVMAGLRP E +V +L Sbjct: 126 ILDLLELGDRAKDPAQTLTLPDRKRLEVAKALATRPKLLLLDEVMAGLRPVECDRMVAIL 185 Query: 181 RRL-VERGLTIMLVEHVMRIVMEAAENVVVLHHGAKIAEGAPVYIVKHPEVLAGYLGD 237 L E GLTI+L+EHVMR VM +++VVVLHHG KIAEG P + HP+VL YLG+ Sbjct: 186 TGLNKETGLTILLIEHVMRAVMALSDHVVVLHHGEKIAEGTPAEVTSHPKVLECYLGE 243