BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0080.p (1137 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_998921.1| molybdopterin oxidoreductase [Verminephrobacter... 1093 0.0 ref|NP_929519.1| hypothetical protein plu2262 [Photorhabdus lumi... 1065 0.0 ref|YP_299948.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:mo... 1045 0.0 ref|YP_004682466.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding... 1040 0.0 ref|ZP_02885572.1| molydopterin dinucleotide-binding region [Bur... 1035 0.0 >ref|YP_998921.1| molybdopterin oxidoreductase [Verminephrobacter eiseniae EF01-2] gb|ABM59903.1| molybdopterin oxidoreductase [Verminephrobacter eiseniae EF01-2] Length = 1155 Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 570/1147 (49%), Positives = 738/1147 (64%), Gaps = 21/1147 (1%) Query: 5 QSFCTLCGSQCGTLNVVENGQLVAVRNDPSHPTGQAVCPKGRAGPEIVAANNRIIYPMRR 64 Q +CTLC S+CGTLN V+ LV+VR D SHPTGQA+C KG+A PE+V + +R+ YPMRR Sbjct: 14 QGYCTLCRSRCGTLNEVQGDMLVSVRPDASHPTGQAMCMKGKAAPELVHSPHRLRYPMRR 73 Query: 65 TRPKTDPDPGWVRISWDEALDLCAGKLLDVRERYGAEGVAFAVTTKSGTGIADSIEWIDR 124 TRPKT+ DPGWVRI WDEAL A +L ++ GAE V FAVTT SGT + DSI+WI+R Sbjct: 74 TRPKTEADPGWVRIGWDEALAETAQRLGAIKAESGAESVVFAVTTPSGTPLTDSIDWIER 133 Query: 125 FVRLFGSPNIASSTDVCNWHRDVAHRFTFGVGMPTADYAHAELIVLWGHNPTSTWLAQAD 184 FVRLFGSPNI +T+VCNWH+D AH FTFG GMP ADYA A+LIVLWGHNP +TWLAQA+ Sbjct: 134 FVRLFGSPNICYATEVCNWHKDFAHAFTFGCGMPAADYAQADLIVLWGHNPANTWLAQAN 193 Query: 185 AIARGRANGAAMIVVDPRATPLAIDADVWLQVRPGTDAALALGVSNLLIQEGGVDLEFLR 244 AI RGRANGA M+V+DPR T LA AD WL VRPGTDAALALG+ +LLI + D F+R Sbjct: 194 AIGRGRANGAKMVVIDPRPTALARQADAWLPVRPGTDAALALGLIHLLIADARFDEGFVR 253 Query: 245 RWTNAPMLIRESDGLLLRARDIPDRESDGTAQQFVAWDVRTNEPYIYDTTRLLDVDTARR 304 WTNAP+L+R +G LR +D+ D +F+AW+ YDT + A Sbjct: 254 AWTNAPLLVRGDNGHFLREQDL---WPDAQGNRFMAWNDARGCAVPYDTEQAAQAQDAAH 310 Query: 305 FALTGLYEVRGHHGEAIACRPAFDHFQRACAAWTPERVEQVTGVPRTKLKAAASLMASHS 364 F L G E+ + ++C PAF+ + CAA+TP VE++TGV + L+A A L + Sbjct: 311 FRLRGALEI-DVGAQRLSCAPAFELLAQGCAAYTPPDVERITGVAQASLRAVADLFGTCR 369 Query: 365 KIAYHAWTGIGQGSNATQIERAVATLYALRGSFDEIGGNRILGRQPANKVDSTDLLVETQ 424 ++AYHAWTGIGQ +NATQ ERAVATLYAL GSFD IGGNR+ N V+S LL + Q Sbjct: 370 RVAYHAWTGIGQHTNATQAERAVATLYALCGSFDRIGGNRVRVGPRVNAVNSLSLLPDAQ 429 Query: 425 SCKTLGRDIRPMGPAAEGRVKPLDVYRAIVTSDPYPIRALVGFGSNHLLTQGDTDEIRRG 484 K LG RP+GP A G V D YR ++ +PY +RA++ FG+N ++Q DT + Sbjct: 430 RAKALGLAERPVGPPAHGWVTARDTYRVMLEGEPYKVRAMMAFGTNLPVSQADTALAHQA 489 Query: 485 LEVVEFYVHTDIVETPVARYADVLLPASTPWEREGLRFGFGISEAAQNLIQLRPAVLAPR 544 L +EF+VH D+ ETP ARYAD+LLP +TPWEREGLR GF I + A +QLR ++ PR Sbjct: 490 LSQLEFHVHCDLFETPAARYADILLPVNTPWEREGLRIGFEIDDRAAGWVQLRQRMVTPR 549 Query: 545 GEARSDLEIVFALAERLGMGDKFFHGDIDAGWNYMLAPLGITVQDLRANGGKIIRPIEHA 604 GE+R+D +++F LA RLGMGD FF G +DAGWN+ML PLG+TV LRA + I+ + Sbjct: 550 GESRADNDVLFDLATRLGMGDGFFGGSLDAGWNHMLEPLGLTVDQLRARPEGMACAIDAS 609 Query: 605 VRKYGHVDAWDRVAGFQTETRRVELYSELLLRNHQSPVPIHAE--------EHVDRSLYP 656 +KY V GF T TRRVELYSE LLR+ Q PV E + + +P Sbjct: 610 EQKYARATPAG-VRGFDTPTRRVELYSETLLRHGQPPVATFVEPADTPRDAKATRQGRFP 668 Query: 657 FTLISMKNGVFCHSQHRGIASLRRRASRPTIRLHGSAARLKNINDGHSVEVTSRHGSTRF 716 + L S KNG +CHSQHR + SLR+RA P L A K I DG + + +R G RF Sbjct: 669 YVLSSAKNGFYCHSQHRSLPSLRKRAPDPVAELSPVLAAAKGIVDGDWMRIRTRVGEARF 728 Query: 717 VAEIDNTLASDVLAADFGWWEACEPLGKQSYALTGAASSNFNSLVSAETRDPVSGSVNHR 776 VA + L DV+ A+FGWW++C L + + GA SNFN+L+SA++ DPVSGSV HR Sbjct: 729 VARVTPQLGDDVIVAEFGWWQSCPELDRDGLPVEGALGSNFNALISADSCDPVSGSVPHR 788 Query: 777 AIACDVR--CVGDLGSRSWQGFRRFIVSDRHAESDSALAISLAPQETGALPDYEPGQYVR 834 + CD+ ++ R W G+R F +S E+D L I P + G LPDY PGQ++ Sbjct: 789 SFLCDIERDPATEMRQRKWSGYRPFRISALRPEADGVLGIHFEPVDGGELPDYRPGQHIE 848 Query: 835 IRVARPDTGELLTRAYSLTGAAGIRNRSEYRICVGRASAGASDASTS---LSSLIHETLK 891 +++ D G +TRAYSLTGAA + R Y + V ++D + +SS +H LK Sbjct: 849 MQL-HLDDGTQVTRAYSLTGAAEVPGRRSYSVAVRHQRGHSADGTPHEGRVSSHLHRALK 907 Query: 892 VGDMVEVEAPSGAFTMPTVSSVPLILMATGIGITPFMSLLNSL-DGDQMPSVTLLYGNRN 950 VGD + + APSG F +P S PL+ A GIGITPF+SLL SL DG Q P++ L Y N+N Sbjct: 908 VGDTLALRAPSGGFVLPRHSPQPLVFFAGGIGITPFISLLESLPDGAQGPAIWLYYANQN 967 Query: 951 GSEHAFKRQLRALAQRLPRLVVRTFYSRPRASDVPGADFDVHGRLDAAQIDASLVMERPR 1010 G+ HAF ++ RLP+L V Y+ PR + G D+ +DA+ +D +L+ +R R Sbjct: 968 GTTHAFHERIAQHRARLPQLQVVDHYNAPRLQERQGIDYQSDRFIDASVVDDALIAQRAR 1027 Query: 1011 FYLCGSDTMVTSTTRSLVSFGVPKFDIHTEVFISPTNTRDKGLGPCSVSFKRSGIS-FQW 1069 FYLCG M+ + T LV+ GVP+FDI +EVF SPT G +VSF RSG + W Sbjct: 1028 FYLCGPPAMMDAVTAGLVARGVPRFDIFSEVFRSPTTPPTDGDQRFTVSFARSGHAPVTW 1087 Query: 1070 GPKDGTLLECAERLGIRAPSGCRVGQCESCAVRVLAGSTRQLSGAVPEDSGTVFTCRAVP 1129 P+ GTLL E LG++ SGCRVGQCESCAVR+L+G R L G+ PED C+AVP Sbjct: 1088 TPRQGTLLTFGESLGVQMASGCRVGQCESCAVRLLSGKVRHLHGSEPEDPAVCLACQAVP 1147 Query: 1130 CSDLVLD 1136 D+VL+ Sbjct: 1148 LEDVVLE 1154 >ref|NP_929519.1| hypothetical protein plu2262 [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE14555.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 1148 Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/1144 (44%), Positives = 728/1144 (63%), Gaps = 15/1144 (1%) Query: 5 QSFCTLCGSQCGTLNVVENGQLVAVRNDPSHPTGQAVCPKGRAGPEIVAANNRIIYPMRR 64 + +CTLC S+CGT+N V N L+ ++ +P HPTG A+C KG+A PE+ + NRI++P+RR Sbjct: 7 EGYCTLCRSRCGTVNEVRNDTLIKIQQNPKHPTGNAMCMKGKAAPELAHSPNRILHPLRR 66 Query: 65 TRPKTDPDPGWVRISWDEALDLCAGKLLDVRERYGAEGVAFAVTTKSGTGIADSIEWIDR 124 T PK D DPGW +I+WDEAL A KL + GAE VAF+VT+ SGT ++DS+EWI+R Sbjct: 67 TNPKGDADPGWEKITWDEALTYVAEKLAFYKAESGAESVAFSVTSPSGTPLSDSLEWIER 126 Query: 125 FVRLFGSPNIASSTDVCNWHRDVAHRFTFGVGMPTADYAHAELIVLWGHNPTSTWLAQAD 184 F+R FGSPN+ ST+VCNWH+D AH+FTFG +P ADY +AELI+LWGHNPT+TWLAQA+ Sbjct: 127 FIRNFGSPNVCYSTEVCNWHKDEAHKFTFGCSIPVADYRNAELIILWGHNPTNTWLAQAE 186 Query: 185 AIARGRANGAAMIVVDPRATPLAIDADVWLQVRPGTDAALALGVSNLLIQEGGVDLEFLR 244 A+ GR GA +IVVDPR T LA ++D WL + PGTDAALALG+ N++I G D F+ Sbjct: 187 ALGAGRNAGAKLIVVDPRHTALAKESDNWLNINPGTDAALALGLINIIINRRGYDQAFVA 246 Query: 245 RWTNAPMLIRESDGLLLRARDIPDRESDGTAQQFVAWDVRTNEPYIYDTTRLLDVDTARR 304 RWTNA +L+R +GL LR +DI ++V W+ T P YD + D Sbjct: 247 RWTNASLLVRNDNGLFLREKDI---NISAKKNRYVVWNNITQSPLPYDIHENVPCDENDH 303 Query: 305 FALTGLYEVRGHH--GEAIACRPAFDHFQRACAAWTPERVEQVTGVPRTKLKAAASLMAS 362 +AL G + + + I C+ AF C +TPE VE++TG+ + KL AA L+ S Sbjct: 304 YALLGEFSINSAEDVNKKIPCKSAFQRLLNECQPYTPEYVEKITGITKEKLLYAADLIIS 363 Query: 363 HSKIAYHAWTGIGQGSNATQIERAVATLYALRGSFDEIGGNRILGRQPANKVDSTDLLVE 422 +IAYH+WTG+ Q +NATQ ERA+A LYAL G FD G NR+ + P N V++ L+ + Sbjct: 364 SKRIAYHSWTGVAQHTNATQSERAIAVLYALTGCFDTQGSNRVYNKHPVNPVNARRLMPK 423 Query: 423 TQSCKTLGRDIRPMGPAAEGRVKPLDVYRAIVTSDPYPIRALVGFGSNHLLTQGDTDEIR 482 Q K LG RP+GP +G + D+Y+AI+ PYPIRA++ FG+N L + DT Sbjct: 424 EQQEKALGFKERPLGPPLDGWITSHDLYQAILHKRPYPIRAMMAFGTNMLSSHADTKIGI 483 Query: 483 RGLEVVEFYVHTDIVETPVARYADVLLPASTPWEREGLRFGFGISEAAQNLIQLRPAVLA 542 L+ +EF+VH D+ ETP A YAD+LLP +TPWEREGLR GF IS A+ L+QLR +++ Sbjct: 484 DALKQLEFHVHCDLFETPTAHYADILLPVNTPWEREGLRVGFEISAKAEELVQLRQKMIS 543 Query: 543 PRGEARSDLEIVFALAERLGMGDKFFHGDIDAGWNYMLAPLGITVQDLRANGGKIIRPIE 602 PRGE+RSD EIVF LA RLGM D FF+G ++AGWNY+L P+G+TV+ LR I P+ Sbjct: 544 PRGESRSDNEIVFDLACRLGMNDLFFNGSVEAGWNYILEPIGLTVEALREKPAGISMPLI 603 Query: 603 HAVRKYGHVD-AWDRVAGFQTETRRVELYSELLLRNHQSPVPIHAE--EHVD-RSLYPFT 658 RKY +D + V GF TET VE+YSE L R+ P+PI+ E E+++ S +P+ Sbjct: 604 QHDRKYAGIDPVKNTVKGFDTETGVVEIYSEKLWRHGYPPLPIYDEPKENLNSESHFPYR 663 Query: 659 LISMKNGVFCHSQHRGIASLRRRASRPTIRLHGSAARLKNINDGHSVEVTSRHGSTRFVA 718 L S+KNG +CHSQ R + LR+++ P + ++ A K IN+G VEV +R+G RF A Sbjct: 664 LTSVKNGFYCHSQQRSLTRLRKKSPYPKLEINSRLAEKKGINNGDWVEVITRNGEARFKA 723 Query: 719 EIDNTLASDVLAADFGWWEACEPLGKQSYALTGAASSNFNSLVSAETRDPVSGSVNHRAI 778 +D+ +A D + A+FGWW+AC GK+ + G SSN+N+L+S ++ DP+SG+ R+ Sbjct: 724 SLDDNIAYDTIIAEFGWWQACPDYGKEGFPAIGKNSSNYNALISDDSCDPISGASPLRSF 783 Query: 779 ACDVRCVGDLGS--RSWQGFRRFIVSDRHAESDSALAISLAPQETGALPDYEPGQYVRIR 836 CD++ D+ R WQG + F V D E+ + Q+ LPDYEPGQ++ ++ Sbjct: 784 RCDIKLAEDINPERRPWQGRKAFRVVDTKPEAKGVKTVIFESQDGTMLPDYEPGQHITVQ 843 Query: 837 VARPDTGELLTRAYSLTGAAGIRNRSEYRICVGRASAGASDAST---SLSSLIHETLKVG 893 V+ P + RAYSLTG A + R Y I V + SD T +SS I++TL G Sbjct: 844 VSIPGQDAPVIRAYSLTGTATLEGRKSYSISVRHQKSITSDGETFEGVMSSYINKTLVAG 903 Query: 894 DMVEVEAPSGAFTMPTVSSVPLILMATGIGITPFMSLLNSLDGD-QMPSVTLLYGNRNGS 952 V + P G F +P + P++++A GIGITPF+S L SL + + P + LLY N+N + Sbjct: 904 AEVNLTPPGGNFIIPLNAKQPVVMLAGGIGITPFISYLESLPANGEKPELLLLYANQNSN 963 Query: 953 EHAFKRQLRALAQRLPRLVVRTFYSRPRASDVPGADFDVHGRLDAAQIDASLVMERPRFY 1012 H F ++L+ + ++ +L V +YS P D+ G ++ HG + A + +L+ ++ RFY Sbjct: 964 THTFSKRLKEIESKIKQLKVINYYSNPLPVDIEGINYQYHGYITADAVPETLIKQQARFY 1023 Query: 1013 LCGSDTMVTSTTRSLVSFGVPKFDIHTEVFISPTNTRDKGLGPCSVSFKRSGISFQWGPK 1072 +CG M+ + L++ GVP FDI+ E+F S T + K +V F++SG+ +W P Sbjct: 1024 MCGPAPMMKTFEEGLLTLGVPPFDIYKEMFRSLTPVKIKDGKSFAVKFEKSGVPLEWSPD 1083 Query: 1073 DGTLLECAERLGIRAPSGCRVGQCESCAVRVLAGSTRQLSGAVPEDSGTVFTCRAVPCSD 1132 GTLL E+ GI+ SGCRVGQCESCAV++ +G + L+G P + G TC+ +P SD Sbjct: 1084 KGTLLNFGEKSGIKMASGCRVGQCESCAVKLKSGEVQHLNGVEPSEQGMCLTCQCIPISD 1143 Query: 1133 LVLD 1136 + +D Sbjct: 1144 ISID 1147 >ref|YP_299948.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:molybdopterin oxidoreductase:molydopterin dinucleotide-binding region:molybdopterin oxidoreductase Fe4S4 region:oxidoreductase FAD-binding region [Ralstonia eutropha JMP134] gb|AAZ65104.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Molybdopterin oxidoreductase:molybdopterin dinucleotide-binding region:Molybdopterin oxidoreductase Fe4S4 region:Oxidoreductase FAD-binding region [Ralstonia eutropha JMP134] Length = 1142 Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 557/1148 (48%), Positives = 735/1148 (64%), Gaps = 25/1148 (2%) Query: 3 EIQSFCTLCGSQCGTLNVVENGQLVAVRNDPSHPTGQAVCPKGRAGPEIVAANNRIIYPM 62 E + FCTLC S+CGT+NVV+ LVAVR D HPTG+A+C KG+A PE+V + +RI+YPM Sbjct: 5 EKKGFCTLCRSRCGTVNVVDGETLVAVRPDGDHPTGKAMCLKGKAAPELVHSADRILYPM 64 Query: 63 RRTRPKTDPDPGWVRISWDEALDLCAGKLLDVRERYGAEGVAFAVTTKSGTGIADSIEWI 122 RRT PK DPGWVRISWDEALD A +LL R GAE VAFAVTT SGT ++DSI+WI Sbjct: 65 RRTHPKGADDPGWVRISWDEALDEIAARLLHARATRGAESVAFAVTTPSGTALSDSIDWI 124 Query: 123 DRFVRLFGSPNIASSTDVCNWHRDVAHRFTFGVGMPTADYAHAELIVLWGHNPTSTWLAQ 182 +RFVRL+GSPNI +T++CNWH+D AH FTFG GMPTADY +A LI+LWGHNPT+TWL+Q Sbjct: 125 ERFVRLYGSPNICYATEICNWHKDFAHAFTFGCGMPTADYRNAGLILLWGHNPTNTWLSQ 184 Query: 183 ADAIARGRANGAAMIVVDPRATPLAIDADVWLQVRPGTDAALALGVSNLLIQEGGVDLEF 242 A+AI GRA GA +IVVDPR T LA DAD WL+V+PG+DAALA+ ++NL+I+ D++F Sbjct: 185 AEAIGAGRAGGARLIVVDPRQTALAEDADQWLRVKPGSDAALAMALANLMIEANAFDIDF 244 Query: 243 LRRWTNAPMLIRESDGLLLRARDIPDRESDGTAQQFVAWDVRTNEPYIYDTTRLLDVDTA 302 +RRWTN P+L+R+ +G LR DI ++D + WD R VD A Sbjct: 245 VRRWTNGPLLVRQDNGAFLRGGDIGLADTDA----LLVWDARQRMAVPAGK----GVDDA 296 Query: 303 RRFALTGLY---EVRGHHGEAIACRPAFDHFQRACAAWTPERVEQVTGVPRTKLKAAASL 359 + AL G + + G +++ C+PAFD + CA +T ER +T +P ++ AASL Sbjct: 297 QHIALRGTFAIPRIGGGERKSLLCQPAFDLYAAECARYTVERAAALTWIPEGDIRHAASL 356 Query: 360 MASHSKIAYHAWTGIGQGSNATQIERAVATLYALRGSFDEIGGNRILGRQPANKVDSTDL 419 + + +IAYHAW+G+GQ NATQ ERA+A LYAL GSFD GGNR+ + P N V DL Sbjct: 357 IGAAGRIAYHAWSGVGQHENATQTERAIACLYALTGSFDRRGGNRVYSKPPFNAVSRFDL 416 Query: 420 LVETQSCKTLGRDIRPMGPAAEGRVKPLDVYRAIVTSDPYPIRALVGFGSNHLLTQGDTD 479 L Q+ K LG D RP+GP A+G V D+YRAI PY + +L+ FG+N LL+Q D Sbjct: 417 LSPDQAHKALGLDARPLGPPAQGWVTAPDLYRAITHHAPYAVTSLIAFGTNTLLSQPDVA 476 Query: 480 EIRRGLEVVEFYVHTDIVETPVARYADVLLPASTPWEREGLRFGFGISEAAQNLIQLRPA 539 + L +E YVH D+ E P AR+AD+LLP +TPWEREGLR GF +S A+ +QLR Sbjct: 477 NAEQALRELELYVHCDLFENPSARHADILLPVNTPWEREGLRIGFEVSADAEQFVQLRQR 536 Query: 540 VLAPRGEARSDLEIVFALAERLGMGDKFFHGDIDAGWNYMLAPLGITVQDLRANGGKIIR 599 ++AP GE+RSD +IVFALA R+G+ + FF G ++AGWN+MLAP G+TV LR I Sbjct: 537 MVAPLGESRSDNDIVFALAARIGLDEAFFGGSLEAGWNHMLAPTGLTVAALRDAPEGIRV 596 Query: 600 PIEHAVRKYGHVDAWDRVAGFQTETRRVELYSELLLRNHQSPVPIHAEEHVD-----RSL 654 +E KY A F T T VELYSE LLR+ P+P E + + Sbjct: 597 LVEDVEMKYA---AGTDGQPFNTPTGLVELYSERLLRHGYPPLPGLPESAWNDAGQTSAS 653 Query: 655 YPFTLISMKNGVFCHSQHRGIASLRRRASRPTIRLHGSAARLKNINDGHSVEVTSRHGST 714 +P+ + S KNG +CHSQ RG+ASLRR+A P + + A +NI G V V++ GS Sbjct: 654 FPYLMTSAKNGYYCHSQQRGVASLRRKALLPQLDISSDIAAARNIRTGDPVRVSTPAGSA 713 Query: 715 RFVAEIDNTLASDVLAADFGWWEACEPLGKQSYALTGAASSNFNSLVSAETRDPVSGSVN 774 RF A + L V+ ++GWW+ C+P+G+Q A+ G S+NFN+L+ A +DPVSGS Sbjct: 714 RFTARVQPGLHPAVVVGEYGWWQGCDPMGQQPTAVLGTDSANFNALIDATRQDPVSGSSP 773 Query: 775 HRAIACDVR--CVGDLGSRSWQGFRRFIVSDRHAESDSALAISLAPQETGALPDYEPGQY 832 R C+V D+ R W+G+R F + E+ A+ L P + G LPDY PGQ+ Sbjct: 774 LRCCHCNVERDATLDIRRRRWEGYRPFRIVGLRKEATDVTAVDLEPADGGRLPDYLPGQH 833 Query: 833 VRIRVARPDTGELLTRAYSLTGAAGIRNRSEYRICVGRASAGASDA---STSLSSLIHET 889 V IR+ + + R+YSLTG A + +R Y I V A A + S SS I+ Sbjct: 834 VTIRLCVDTGQQEVVRSYSLTGPAVVADRRRYAIAVRHARARLASGEVVSGVASSFINTR 893 Query: 890 LKVGDMVEVEAPSGAFTMPTVSSVPLILMATGIGITPFMSLLNSLDGDQ-MPSVTLLYGN 948 L +GD +E+ AP+G F MPT ++ PL+L+A GIGITPF++LL SL G Q P + LLY N Sbjct: 894 LAIGDTIELRAPAGTFVMPTRTARPLVLLAGGIGITPFINLLESLVGQQDPPRMLLLYAN 953 Query: 949 RNGSEHAFKRQLRALAQRLPRLVVRTFYSRPRASDVPGADFDVHGRLDAAQIDASLVMER 1008 +NG+ HAF+ LR L +P L V FY P D+ G+DF VHGR+ AA + +L+ R Sbjct: 954 QNGTTHAFRDPLRELEALIPALKVINFYDAPADGDILGSDFQVHGRVTAAAVPDALLASR 1013 Query: 1009 PRFYLCGSDTMVTSTTRSLVSFGVPKFDIHTEVFISPTNTRDKGLGPCSVSFKRSGISFQ 1068 P Y+CG D M+T+ L + GVP+FDI EVF SPT R + V F+RS I+ Sbjct: 1014 PLVYMCGPDAMMTAFAAGLAARGVPRFDIQKEVFRSPTVRRIEASQAFQVQFRRSDITLS 1073 Query: 1069 WGPKDGTLLECAERLGIRAPSGCRVGQCESCAVRVLAGSTRQLSGAVPEDSGTVFTCRAV 1128 W + G LL AE LGIR PSGCRVGQCESCAVR+++G+ L G P+D G C+AV Sbjct: 1074 WRSEHGPLLGFAEALGIRLPSGCRVGQCESCAVRIVSGTVHHLHGEAPDDPGVCLACQAV 1133 Query: 1129 PCSDLVLD 1136 P SDLV+D Sbjct: 1134 PASDLVID 1141 >ref|YP_004682466.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding protein [Cupriavidus necator N-1] gb|AEI81234.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding protein [Cupriavidus necator N-1] Length = 1157 Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/1148 (47%), Positives = 735/1148 (64%), Gaps = 25/1148 (2%) Query: 3 EIQSFCTLCGSQCGTLNVVENGQLVAVRNDPSHPTGQAVCPKGRAGPEIVAANNRIIYPM 62 E + FCTLC S+CGT+NVV LVAVR D HPTG+A+C KG+A PE+V + R+++PM Sbjct: 20 EKKGFCTLCRSRCGTINVVNGDTLVAVRPDGEHPTGKAMCLKGKAAPELVHSAERLLHPM 79 Query: 63 RRTRPKTDPDPGWVRISWDEALDLCAGKLLDVRERYGAEGVAFAVTTKSGTGIADSIEWI 122 RRT PK DPGWVRISW+EALD A +L++ R GAE VAFAVTT SGT ++DSI+WI Sbjct: 80 RRTNPKDAADPGWVRISWEEALDQIAARLIEARTTLGAESVAFAVTTPSGTALSDSIDWI 139 Query: 123 DRFVRLFGSPNIASSTDVCNWHRDVAHRFTFGVGMPTADYAHAELIVLWGHNPTSTWLAQ 182 +RFVRL+GSPNI +T++CNWH+D AH FTFG GMPTADY +AELI+LWGHNP +TWL+Q Sbjct: 140 ERFVRLYGSPNICYATEICNWHKDFAHAFTFGCGMPTADYRNAELILLWGHNPANTWLSQ 199 Query: 183 ADAIARGRANGAAMIVVDPRATPLAIDADVWLQVRPGTDAALALGVSNLLIQEGGVDLEF 242 A+AI GRA GA +IVVDPR T LA +AD WL+V+PG+DAALA+ ++NLLI+ D++F Sbjct: 200 AEAIGAGRAAGARLIVVDPRQTGLAEEADQWLRVKPGSDAALAMALANLLIEANAFDIDF 259 Query: 243 LRRWTNAPMLIRESDGLLLRARDIPDRESDGTAQQFVAWDVRTNEPYIYDTTRLLDVDTA 302 +R+WTN P+L+R+ +G LR RDI ++D FV WD Sbjct: 260 VRQWTNGPLLVRKDNGAFLRGRDIGIGQTDA----FVVWDAHQRMAVPAGG----QCHVP 311 Query: 303 RRFALTGLYEVR---GHHGEAIACRPAFDHFQRACAAWTPERVEQVTGVPRTKLKAAASL 359 R AL G +EV H + C+PAF+ + CA + +R ++T +P ++ AAS+ Sbjct: 312 GRIALRGTFEVTVGDRHDQSMLMCQPAFELYAAECARYPADRAARLTWIPEGDIRHAASM 371 Query: 360 MASHSKIAYHAWTGIGQGSNATQIERAVATLYALRGSFDEIGGNRILGRQPANKVDSTDL 419 + + ++AYHAW+G+GQ NATQ ERA+A LYAL GSFD GGNRI + P N V DL Sbjct: 372 IGTARRVAYHAWSGVGQHENATQTERAIACLYALTGSFDRRGGNRIYQKPPFNAVSRLDL 431 Query: 420 LVETQSCKTLGRDIRPMGPAAEGRVKPLDVYRAIVTSDPYPIRALVGFGSNHLLTQGDTD 479 L Q K LG RP+GP A+G + D+YRAI PY + L+ FG+N LL+Q D Sbjct: 432 LSPEQGRKALGLSERPLGPPAQGWITARDLYRAITDKKPYAVTTLIAFGTNPLLSQPDVA 491 Query: 480 EIRRGLEVVEFYVHTDIVETPVARYADVLLPASTPWEREGLRFGFGISEAAQNLIQLRPA 539 R L + FYVH D+ E P A+YAD+LLP STPWEREGLR GF +S A+ L+QLR Sbjct: 492 MGERALRALPFYVHCDLFENPSAKYADILLPVSTPWEREGLRIGFEVSAEAEKLVQLRQR 551 Query: 540 VLAPRGEARSDLEIVFALAERLGMGDKFFHGDIDAGWNYMLAPLGITVQDLRANGGKIIR 599 ++ PRGEARSD EIVFALA R+G+ + FF ++AGW+YMLAP+G+TV LRA + Sbjct: 552 MVPPRGEARSDNEIVFALAARIGLQEAFFGASLEAGWDYMLAPMGLTVAALRAKPEGVRI 611 Query: 600 PIEHAVRKYGHVDAWDRVAGFQTETRRVELYSELLLRNHQSPVPIHAEEHVD-----RSL 654 P+E KY + F T T VELYSE LL + SP+P + E ++ RS Sbjct: 612 PVEDTEMKYRMGKS---ARPFNTPTGLVELYSEGLLAHGYSPLPGYQEPSIEQGDAARSA 668 Query: 655 YPFTLISMKNGVFCHSQHRGIASLRRRASRPTIRLHGSAARLKNINDGHSVEVTSRHGST 714 +P+ L S KNG +CHSQ RG+ASLRR+A P + + AA ++I G V +++ GS Sbjct: 669 FPYLLTSAKNGYYCHSQQRGVASLRRKAMLPRLDISREAAAARDIRSGDPVRISTPGGSA 728 Query: 715 RFVAEIDNTLASDVLAADFGWWEACEPLGKQSYALTGAASSNFNSLVSAETRDPVSGSVN 774 F A ID L VL ++GWW+ C+ +G+ A+ GA S NFN L+ A+ +DPVSGS Sbjct: 729 LFTARIDPGLHPAVLVGEYGWWQRCDAMGQAPLAVCGADSVNFNGLIDAQRQDPVSGSSP 788 Query: 775 HRAIACDV--RCVGDLGSRSWQGFRRFIVSDRHAESDSALAISLAPQETGALPDYEPGQY 832 RA C + D+ R W+ FR F V E+ ++ +AP + G LPD+ PGQ+ Sbjct: 789 LRAYRCSIERETAFDIRRRPWEDFRVFRVVALCKEAADVTSVYMAPTDGGRLPDFLPGQH 848 Query: 833 VRIRVARPDTGELLTRAYSLTGAAGIRNRSEYRICVGRASAGASDA---STSLSSLIHET 889 IR+ G+ + R+YSLTG A + +R Y I V + A ++ S SS I++ Sbjct: 849 ATIRLFIGGGGQEVIRSYSLTGPAIMADRQCYSISVRQTVARLANGELVSGRASSFINQQ 908 Query: 890 LKVGDMVEVEAPSGAFTMPTVSSVPLILMATGIGITPFMSLLNSLDGD-QMPSVTLLYGN 948 L VGD+VE+ AP G F MPT ++ PL+L+A GIGITPF++LL SL G + P + LLY N Sbjct: 909 LAVGDVVELRAPGGTFVMPTRTARPLVLLAGGIGITPFINLLESLAGQAEPPRILLLYAN 968 Query: 949 RNGSEHAFKRQLRALAQRLPRLVVRTFYSRPRASDVPGADFDVHGRLDAAQIDASLVMER 1008 +NG+ HAFKR++R L +P L V +Y P D+ G DF VHGR+ A + +L+ R Sbjct: 969 QNGATHAFKRRIRELEAAIPTLSVINYYDAPADGDIAGRDFHVHGRVSADAVPQALLAMR 1028 Query: 1009 PRFYLCGSDTMVTSTTRSLVSFGVPKFDIHTEVFISPTNTRDKGLGPCSVSFKRSGISFQ 1068 P Y+CG M+T+ + + GVP FDIH E+F SP + + V F++SG+ Q Sbjct: 1029 PLIYMCGPVPMMTAFAEGMAARGVPHFDIHKEIFRSPAVAKIEHGQAFQVHFRKSGVVHQ 1088 Query: 1069 WGPKDGTLLECAERLGIRAPSGCRVGQCESCAVRVLAGSTRQLSGAVPEDSGTVFTCRAV 1128 W +DG LL AE G+R PSGCRVGQCESCAVR+++GS L G VP+D G C+AV Sbjct: 1089 WRSEDGALLGFAEARGVRLPSGCRVGQCESCAVRIVSGSAHHLQGEVPDDPGICLACQAV 1148 Query: 1129 PCSDLVLD 1136 P SDLV+D Sbjct: 1149 PASDLVID 1156 >ref|ZP_02885572.1| molydopterin dinucleotide-binding region [Burkholderia graminis C4D1M] gb|EDT08728.1| molydopterin dinucleotide-binding region [Burkholderia graminis C4D1M] Length = 1149 Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/1154 (46%), Positives = 731/1154 (63%), Gaps = 31/1154 (2%) Query: 3 EIQSFCTLCGSQCGTLNVVENGQLVAVRNDPSHPTGQAVCPKGRAGPEIVAANNRIIYPM 62 E + +CTLC S+CGT+N V L+ VR D +HPTG A+C KG+A PE+V + +R++YPM Sbjct: 6 EKKGYCTLCRSRCGTINTVRGDVLLKVRPDNTHPTGNAMCMKGKAAPELVHSPDRVLYPM 65 Query: 63 RRTRPKTDPDPGWVRISWDEALDLCAGKLLDVRERYGAEGVAFAVTTKSGTGIADSIEWI 122 RRT PK DP W RISWDEALD A L V+ GAE V F VTT SGT ++DSI+W+ Sbjct: 66 RRTAPKGAADPRWKRISWDEALDEIATTLAHVKRENGAESVVFGVTTPSGTPMSDSIDWV 125 Query: 123 DRFVRLFGSPNIASSTDVCNWHRDVAHRFTFGVGMPTADYAHAELIVLWGHNPTSTWLAQ 182 +RFV FGSPNI +T++CNWH+D AH FTFG GMPTADY ++++IVLWG NP +TWLAQ Sbjct: 126 ERFVWSFGSPNICYATEICNWHKDFAHVFTFGCGMPTADYRNSDVIVLWGTNPANTWLAQ 185 Query: 183 ADAIARGRANGAAMIVVDPRATPLAIDADVWLQVRPGTDAALALGVSNLLIQEGGVDLEF 242 AD+IA GR NGA +IVVDPR T LA DADVWL+V+PGTD ALA+G++ +I G +D F Sbjct: 186 ADSIAAGRRNGAKLIVVDPRPTALARDADVWLRVQPGTDGALAMGIARQMIATGNIDDTF 245 Query: 243 LRRWTNAPMLIRESDGLLLRARDIPDRESDGTAQQFVAWDVRTNEPYIYDTTRLLDVDTA 302 +R WTN L+R G LR RDI + + + ++ W+ N + + Sbjct: 246 VREWTNGAFLVRRDSGHFLRERDI---DPESSNNRYAVWNGALNRLELVGEEA---STSP 299 Query: 303 RRFALTGLYEVR-----GHHGEAIACRPAFDHFQRACAAWTPERVEQVTGVPRTKLKAAA 357 +++G Y++R G E + C PAF+ ++ A + +TPE V ++TGV + ++ A Sbjct: 300 SDLSISGSYQIRVFDLTGRVIE-VTCTPAFELYRGALSDYTPEHVSRITGVDASAIEIVA 358 Query: 358 SLMASHSKIAYHAWTGIGQGSNATQIERAVATLYALRGSFDEIGGNRILGRQPANKVDST 417 ++++ +IAYHAW+G+GQ +NATQ ERA+ATLYAL G+FD G NR L +QPAN + + Sbjct: 359 AMLSPRQRIAYHAWSGVGQHTNATQTERAIATLYALTGAFDTQGSNRELLKQPANPLSNY 418 Query: 418 DLLVETQSCKTLGRDIRPMGPAAEGRVKPLDVYRAIVTSDPYPIRALVGFGSNHLLTQGD 477 +L Q K LG D RP+GP ++G V DVYRAI+ S PY +RALV FG+N +++Q D Sbjct: 419 AMLSPQQRTKALGLDERPLGPPSQGWVTARDVYRAILESRPYRVRALVAFGTNMVMSQAD 478 Query: 478 TDEIRRGLEVVEFYVHTDIVETPVARYADVLLPASTPWEREGLRFGFGISEAAQNLIQLR 537 + R L ++F+VH D+ ETP ARYAD+LLP +TPWEREGLR GF I+E A L+QLR Sbjct: 479 SALARDALCALDFHVHCDLFETPSARYADILLPVNTPWEREGLRLGFEINERAVELVQLR 538 Query: 538 PAVLAPRGEARSDLEIVFALAERLGMGDKFFHGDIDAGWNYMLAPLGITVQDLRANGGKI 597 ++ PRGE+R+D IV LA RLGMGD+FF GD++ GWN++L PLG+ V LR++ I Sbjct: 539 QRMVTPRGESRADYNIVLDLAVRLGMGDQFFGGDVEKGWNHVLEPLGLDVATLRSHPEGI 598 Query: 598 IRPIEHAVRKYGHVDAWDRVAGFQTETRRVELYSELLLRNHQSPVPIH-------AEEHV 650 RP+E ++Y + GF TETR VE YSE L R VP + Sbjct: 599 YRPLEQQEKQYACATP-NGPRGFATETRCVEFYSEKLHRYGYPAVPHYVPPSRGEVARAA 657 Query: 651 DRSLYPFTLISMKNGVFCHSQHRGIASLRRRASRPTIRLHGSAARLKNINDGHSVEVTSR 710 +R +P+TL S KNG +CHSQHR + SLRRRA P L A +K I DG + V S Sbjct: 658 ERRRFPYTLTSFKNGYYCHSQHRSLPSLRRRAPYPVAELSADLAAVKGIVDGDWIRVAST 717 Query: 711 HGSTRFVAEIDNTLASDVLAADFGWWEACEPLGKQSYALTGAASSNFNSLVSAETRDPVS 770 +G+ RF A + LA DV+ A++GWW+AC+ +G +S G+A+SN+NS+VS DP+S Sbjct: 718 NGTARFRARVVPELAPDVVVAEYGWWQACDEIGMESSTALGSANSNYNSIVSGAIVDPLS 777 Query: 771 GSVNHRAIACDVRCVG--DLGSRSWQGFRRFIVSDRHAESDSALAISLAPQETGALPDYE 828 GS RA+ CDV D R+WQGFR F+VS H E++ ++ + + G LPDY Sbjct: 778 GSSPLRAVPCDVTLDASVDPARRAWQGFRDFVVSAVHGEAEGVRTVTFSAADGGPLPDYL 837 Query: 829 PGQYVRIRVARPDTGELLTRAYSLTGAAGIRNRSEYRICV----GRASAGASDASTSLSS 884 PGQ+V I + G TRAYSLTG A +R Y I V GR SA +SS Sbjct: 838 PGQHVTIHIPELCEGG-TTRAYSLTGHAIESDRRTYSISVRHQRGR-SADGEQFEGVMSS 895 Query: 885 LIHETLKVGDMVEVEAPSGAFTMPTVSSVPLILMATGIGITPFMSLLNSLD--GDQMPSV 942 IH L VG V ++APSG F +P S P+++ A GIGITPF+S L ++ G Q P Sbjct: 896 HIHRELAVGHRVLLQAPSGTFVVPPASKRPVVIFAGGIGITPFISWLETIGELGTQAPES 955 Query: 943 TLLYGNRNGSEHAFKRQLRALAQRLPRLVVRTFYSRPRASDVPGADFDVHGRLDAAQIDA 1002 L Y N N S HAF++++ L + LP L V Y++PR +V G DF++ G L A +D Sbjct: 956 QLFYANLNSSTHAFRKRIAQLQRALPTLKVVNCYNQPR-DEVLGRDFEMQGYLTAEVVDD 1014 Query: 1003 SLVMERPRFYLCGSDTMVTSTTRSLVSFGVPKFDIHTEVFISPTNTRDKGLGPCSVSFKR 1062 +L+ R RFYLCG + M+ + T LV GVP FDI +E F SP+ +V F+R Sbjct: 1015 ALIQHRARFYLCGPEPMMNAITAGLVERGVPPFDIFSEAFRSPSKPALDPSQRFAVEFRR 1074 Query: 1063 SGISFQWGPKDGTLLECAERLGIRAPSGCRVGQCESCAVRVLAGSTRQLSGAVPEDSGTV 1122 S IS +W P+ G+LL E LGI PSGCRVGQCESCAV+VLAG ++G P+++ Sbjct: 1075 SQISAEWAPERGSLLSFGESLGISMPSGCRVGQCESCAVKVLAGKVSHMTGHGPDEADMC 1134 Query: 1123 FTCRAVPCSDLVLD 1136 C+A+P +D+ ++ Sbjct: 1135 LACQAIPATDISIE 1148