BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0062.p (496 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004678641.1| Pyridine nucleotide-disulfide oxidoreductase... 693 0.0 ref|YP_001862376.1| pyridine nucleotide-disulphide oxidoreductas... 671 0.0 ref|YP_001612963.1| dihydrolipoyl dehydrogenase [Sorangium cellu... 587 e-165 ref|YP_004677794.1| Pyridine nucleotide-disulfide oxidoreductase... 564 e-158 ref|YP_001753955.1| pyridine nucleotide-disulfide oxidoreductase... 540 e-151 >ref|YP_004678641.1| Pyridine nucleotide-disulfide oxidoreductase dimerisation region [Hyphomicrobium sp. MC1] emb|CCB68077.1| Pyridine nucleotide-disulphide oxidoreductase dimerisation region [Hyphomicrobium sp. MC1] Length = 464 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/461 (72%), Positives = 384/461 (83%) Query: 10 MSAIEKFDVVILGSGQGGKQLAWHLGRSGKKVAVVERRWVGGSCPAVACLPSKNELWSAR 69 MS +E D +ILGSGQGGKQLAWHLGRSGKKVAVVERRWVGGSCPAVACLPSKNELWSA+ Sbjct: 1 MSEVEDVDALILGSGQGGKQLAWHLGRSGKKVAVVERRWVGGSCPAVACLPSKNELWSAK 60 Query: 70 IAQTVRNAGHFGTLTGPVSTNMRRILRRKQDMVDREAEFHIDAYKASGAELIMGSGRFAG 129 +A V NA +FGT G V+TN+ ++ +RK DMVDRE H+ AYKASGAELIMGSGRF Sbjct: 61 VAHIVHNAKNFGTEIGSVTTNVAKVRQRKNDMVDREKVLHLSAYKASGAELIMGSGRFTA 120 Query: 130 PKTIEVRLNQGDTRSLAGNEIVINVGTHAAIPDVPGLEAARALTHIEALELDYLPAHLIV 189 PKTIEV LN G TR L GN++VINVG+HAAIP+VPGL +R LTHIEALELDY P LI+ Sbjct: 121 PKTIEVGLNDGGTRILRGNDVVINVGSHAAIPNVPGLLESRPLTHIEALELDYAPERLII 180 Query: 190 LGGGYVGIEMAQAYRRFGSRVTIVEPGRQLMGREDADVAEEMQRVLEAEGVEVLLNARPA 249 LGGGYVGIEMAQ YRRFGSRV I+EPG QLMGREDADVA EM +L +EG+EV L A P Sbjct: 181 LGGGYVGIEMAQTYRRFGSRVVIIEPGEQLMGREDADVASEMLGILVSEGIEVFLGATPI 240 Query: 250 NVHGLSGDAITLTVQTNKGDQAVEGSDLLVAVGRVANVADIGLEKAGVELDARGYVRVTK 309 +V G+SGDA+ + ++++ GD+ +EGSDLLVAVGR N + IGL AGV++ RG++RV + Sbjct: 241 DVQGMSGDAVAVVIRSSSGDKRIEGSDLLVAVGRAPNTSGIGLNAAGVDVTDRGFIRVNE 300 Query: 310 RLETTASGVWAIGECAGSPQFTHVSVDDFRIVRDNMAGGDRRTDDRLVPYVMFTDPPLAR 369 L+TTA GVWAIGECAGSPQFTHVSVDDFRIVR+NMAGG R+T DRLVP+VMFTDPPLAR Sbjct: 301 SLQTTAPGVWAIGECAGSPQFTHVSVDDFRIVRENMAGGTRKTSDRLVPHVMFTDPPLAR 360 Query: 370 VGLSEAEAERQGVEVRVAKLLMSRVLRTQATDETQGFMKAVISARDDRILGFTMIGSEAG 429 VG+ E EA+RQGV VRVA+L MS VLRT ATDE +GFMK ++ A DDRILGF+MIG+EAG Sbjct: 361 VGMDEGEAQRQGVPVRVARLPMSHVLRTNATDEVEGFMKILVGADDDRILGFSMIGAEAG 420 Query: 430 EVMAAVQTAMLGALPYTRLRDAVLTHLTMAEGLGPLLGNVP 470 EVM VQTAML LPY +LRDAV+ HLT AEGLGPLLGNVP Sbjct: 421 EVMTTVQTAMLAELPYPKLRDAVIAHLTYAEGLGPLLGNVP 461 >ref|YP_001862376.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Burkholderia phymatum STM815] gb|ACC75330.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Burkholderia phymatum STM815] Length = 466 Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/463 (69%), Positives = 387/463 (83%) Query: 10 MSAIEKFDVVILGSGQGGKQLAWHLGRSGKKVAVVERRWVGGSCPAVACLPSKNELWSAR 69 MS +E+FD +ILGSGQGGK LAWHLGRSG++VAVVER+WVGGSCPAVACLPSKNE+WSAR Sbjct: 1 MSQVEQFDTLILGSGQGGKLLAWHLGRSGQRVAVVERQWVGGSCPAVACLPSKNEIWSAR 60 Query: 70 IAQTVRNAGHFGTLTGPVSTNMRRILRRKQDMVDREAEFHIDAYKASGAELIMGSGRFAG 129 +A R+A FG TGPV+ +M ++ RK+ MV+REA FH+ AY++SGAEL+MG GRF G Sbjct: 61 VAHLARHAADFGATTGPVAIDMAKVRERKRGMVEREAAFHVQAYESSGAELVMGVGRFVG 120 Query: 130 PKTIEVRLNQGDTRSLAGNEIVINVGTHAAIPDVPGLEAARALTHIEALELDYLPAHLIV 189 PKT+EV+LN G TR+L+G ++V+NVGTHAAIPDVPGL AA LTHI AL+LD P+HLIV Sbjct: 121 PKTVEVQLNDGGTRTLSGRQVVVNVGTHAAIPDVPGLRAAEPLTHIGALDLDRAPSHLIV 180 Query: 190 LGGGYVGIEMAQAYRRFGSRVTIVEPGRQLMGREDADVAEEMQRVLEAEGVEVLLNARPA 249 LGGGY+G+EMAQAY RFGS VTI+E +LM REDADV EM R+L AEG++V+L+AR Sbjct: 181 LGGGYIGVEMAQAYVRFGSHVTIIERSTRLMAREDADVGAEMLRILRAEGIDVVLDARTV 240 Query: 250 NVHGLSGDAITLTVQTNKGDQAVEGSDLLVAVGRVANVADIGLEKAGVELDARGYVRVTK 309 +V G SG + + V+T GD+ ++GSD+LVA GRV N A IGLE AG++LD RGY+RV Sbjct: 241 SVEGRSGTQVRVVVRTPSGDRTLDGSDILVAAGRVPNTASIGLEHAGIQLDERGYIRVND 300 Query: 310 RLETTASGVWAIGECAGSPQFTHVSVDDFRIVRDNMAGGDRRTDDRLVPYVMFTDPPLAR 369 RL+T+A VWAIGE AGSPQFTHVSVDDFRIVRDN+AGG+R T DRL+PY +FTDPPLAR Sbjct: 301 RLQTSAPDVWAIGEVAGSPQFTHVSVDDFRIVRDNLAGGNRGTGDRLIPYTLFTDPPLAR 360 Query: 370 VGLSEAEAERQGVEVRVAKLLMSRVLRTQATDETQGFMKAVISARDDRILGFTMIGSEAG 429 VGLSE++A+RQG+ VRVA L M+ VLRT+ATDETQGFMK ++SA DDRILGFTMIGSEAG Sbjct: 361 VGLSESDAQRQGIAVRVATLPMNNVLRTEATDETQGFMKVLVSANDDRILGFTMIGSEAG 420 Query: 430 EVMAAVQTAMLGALPYTRLRDAVLTHLTMAEGLGPLLGNVPPR 472 EVMAA+QTAML LPY +LRDAV++HLT+AEGLG LL VP R Sbjct: 421 EVMAAMQTAMLADLPYQKLRDAVISHLTVAEGLGALLSRVPER 463 >ref|YP_001612963.1| dihydrolipoyl dehydrogenase [Sorangium cellulosum 'So ce 56'] emb|CAN92483.1| Dihydrolipoyl dehydrogenase [Sorangium cellulosum 'So ce 56'] Length = 466 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 288/464 (62%), Positives = 357/464 (76%), Gaps = 3/464 (0%) Query: 14 EKFDVVILGSGQGGKQLAWHLGRSGKKVAVVE--RRWVGGSCPAVACLPSKNELWSARIA 71 E+FD+++LGSG GK +AWH+ +G + AVVE R +GG+CP CLPSKNE+WSA++A Sbjct: 4 EQFDILVLGSGASGKHVAWHMAPAGGRTAVVEWEHRMIGGACPNTNCLPSKNEIWSAKVA 63 Query: 72 QTVRNAGHFGTLTGPVSTNMRRILRRKQDMVDREAEFHIDAYKASGAELIMGSGRFAGPK 131 VR+A +GT+TGP S +M R+ +RK++MV+ H++ ++ASGA+LI+G GRF PK Sbjct: 64 DLVRHAAAYGTVTGPSSVDMARVRQRKRNMVEALIAVHMERFRASGADLIIGKGRFVAPK 123 Query: 132 TIEVRLNQGDTRSLAGNEIVINVGTHAAIPDVPGLEAARALTHIEALELDYLPAHLIVLG 191 T+EVR + G TR L G+ + +N+GTHA IPDVPGL AA LTH+EALELD LP HLIVLG Sbjct: 124 TLEVR-SDGKTRVLRGDRVFLNLGTHATIPDVPGLPAAGPLTHVEALELDRLPGHLIVLG 182 Query: 192 GGYVGIEMAQAYRRFGSRVTIVEPGRQLMGREDADVAEEMQRVLEAEGVEVLLNARPANV 251 GGYVG+E AQAYRRFGSRVT++ QL RED DVA + ++ ++EG+EVL +A+P V Sbjct: 183 GGYVGLEFAQAYRRFGSRVTLITRAPQLAPREDPDVAGALLQIFKSEGIEVLPSAQPVWV 242 Query: 252 HGLSGDAITLTVQTNKGDQAVEGSDLLVAVGRVANVADIGLEKAGVELDARGYVRVTKRL 311 G SGD +++ V++ G+Q +EGSDLLVA GR N A IGLE AGVELDARGY++V RL Sbjct: 243 QGRSGDHVSVRVRSPDGEQTIEGSDLLVAAGRTPNTAGIGLETAGVELDARGYIKVNDRL 302 Query: 312 ETTASGVWAIGECAGSPQFTHVSVDDFRIVRDNMAGGDRRTDDRLVPYVMFTDPPLARVG 371 ETTA VWA+GECAGSPQFTH +VDDFR+VRDN AGG R T DRL+P+ MFTDP LARVG Sbjct: 303 ETTAPDVWAMGECAGSPQFTHAAVDDFRVVRDNQAGGHRTTRDRLIPFCMFTDPQLARVG 362 Query: 372 LSEAEAERQGVEVRVAKLLMSRVLRTQATDETQGFMKAVISARDDRILGFTMIGSEAGEV 431 L+E EA+ +GVE RVA L MS VLR T ETQGFMKA++ AR DRILGFTM+G+EAGEV Sbjct: 363 LNEREAKSRGVEARVATLPMSDVLRAATTGETQGFMKALVDARSDRILGFTMLGAEAGEV 422 Query: 432 MAAVQTAMLGALPYTRLRDAVLTHLTMAEGLGPLLGNVPPRVAR 475 +A VQTAML +PYT LRDAVLTH TMAEGLG L VP R R Sbjct: 423 VAVVQTAMLAGMPYTGLRDAVLTHPTMAEGLGSLFAKVPARSTR 466 >ref|YP_004677794.1| Pyridine nucleotide-disulfide oxidoreductase dimerisation region [Hyphomicrobium sp. MC1] emb|CCB67228.1| Pyridine nucleotide-disulphide oxidoreductase dimerisation region [Hyphomicrobium sp. MC1] Length = 457 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 269/459 (58%), Positives = 346/459 (75%), Gaps = 5/459 (1%) Query: 14 EKFDVVILGSGQGGKQLAWHLGRSGKKVAVVERRWVGGSCPAVACLPSKNELWSARIAQT 73 +DV+I+GSG+GGK LAWHLGRSGKKVAV+ER+ +GGSCP CLPSKNE+WSA++A Sbjct: 4 NSYDVLIIGSGEGGKFLAWHLGRSGKKVAVIERKLIGGSCPNTNCLPSKNEIWSAKVADL 63 Query: 74 VRNAGHFGTLTGPVSTNMRRILRRKQDMVDREAEFHIDAYKASGAELIMGSGRFAGPKTI 133 +A FG++TG V+T+MRR++ RK++MVD + H+D +K SGAELIMG RF P+T+ Sbjct: 64 AHHADAFGSITGAVATDMRRVVARKREMVDGLIKMHLDFFKDSGAELIMGEARFVAPRTV 123 Query: 134 EVRLNQGDTRSLAGNEIVINVGTHAAIPDVPGLEAARALTHIEALELDYLPAHLIVLGGG 193 EV+LN G + +G+++VIN+GTHA+IP++ GL AA+ +T++E LEL+YLP HLIVLGGG Sbjct: 124 EVKLNDGGNATFSGDKLVINIGTHASIPNIAGLVAAKPMTNVELLELEYLPRHLIVLGGG 183 Query: 194 YVGIEMAQAYRRFGSRVTIVEPGRQLMGREDADVAEEMQRVLEAEGVEVLLNARPANVHG 253 YVG+E+AQ++RRFGS+VTI+E Q+ +EDADVA E+ L +EG+ + NV G Sbjct: 184 YVGLELAQSFRRFGSQVTILEASPQIAAQEDADVAAEIADALRSEGIAIKTGVAITNVEG 243 Query: 254 LSGDAITLTVQTNKGDQAVEGSDLLVAVGRVANVADIGLEKAGVELDARGYVRVTKRLET 313 SG + +T + EG+DLLVA GR N IGL+ AGVELD+RGY+ V +LET Sbjct: 244 RSGTNVVVTTSGGR----FEGTDLLVAAGRTPNTNAIGLDSAGVELDSRGYIVVNDQLET 299 Query: 314 TASGVWAIGECAGSPQFTHVSVDDFRIVRDNMAGGDRRTDDRLVPYVMFTDPPLARVGLS 373 TA WAIGECAGS QFTHVS DDFRIVRDN+AGG R DRLVPY MFTDP L RVG+S Sbjct: 300 TAPDTWAIGECAGSQQFTHVSFDDFRIVRDNLAGGSRSKKDRLVPYCMFTDPQLGRVGIS 359 Query: 374 EAEAERQGVEVRVAKLLMSRVLRTQATDETQGFMKAVISARDDRILGFTMIGSEAGEVMA 433 E +A+ G+ VR+AKL M+ ++R++ ET+GFMKA++ DDRI+GF M+G EAGEVMA Sbjct: 360 EKQAKAIGINVRIAKLPMAGIMRSRTISETRGFMKALV-GDDDRIVGFAMVGPEAGEVMA 418 Query: 434 AVQTAMLGALPYTRLRDAVLTHLTMAEGLGPLLGNVPPR 472 VQTAML LPYT LRDA++ H TMAEGLGPL VP R Sbjct: 419 VVQTAMLAGLPYTSLRDAIIAHPTMAEGLGPLFTRVPAR 457 >ref|YP_001753955.1| pyridine nucleotide-disulfide oxidoreductase dimerisation region [Methylobacterium radiotolerans JCM 2831] gb|ACB23272.1| pyridine nucleotide-disulphide oxidoreductase dimerisation region [Methylobacterium radiotolerans JCM 2831] Length = 460 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 266/457 (58%), Positives = 335/457 (73%), Gaps = 1/457 (0%) Query: 14 EKFDVVILGSGQGGKQLAWHLGRSGKKVAVVERRWVGGSCPAVACLPSKNELWSARIAQT 73 + +D +++GSG+GGK LAWHL ++G++VAVVERRW+GGSCP CLPSKNE+WSA IA Sbjct: 3 DHYDALVIGSGEGGKFLAWHLAKAGQRVAVVERRWIGGSCPNTNCLPSKNEIWSAEIAHL 62 Query: 74 VRNAGHFGTLTGPVSTNMRRILRRKQDMVDREAEFHIDAYKASGAELIMGSGRFAGPKTI 133 R+A +G TGPV+ +M R++ RK+ MV + H+D Y+ SGAELIMG+ F GP+ + Sbjct: 63 ARHADRYGIETGPVAVDMARVVERKRAMVRGLVDMHLDRYRDSGAELIMGTAAFTGPRAL 122 Query: 134 EVRLNQGDTRSLAGNEIVINVGTHAAIPDVPGLEAARALTHIEALELDYLPAHLIVLGGG 193 V LN G +R+L I +N+GT IPDVPGL A LT+IEALELD +PAHL+VLGGG Sbjct: 123 TVALNAGGSRALTAERIFLNLGTRPTIPDVPGLCDAEPLTNIEALELDAVPAHLVVLGGG 182 Query: 194 YVGIEMAQAYRRFGSRVTIVEPGRQLMGREDADVAEEMQRVLEAEGVEVLLNARPANVHG 253 YVG+E+AQAYRRFGS VT++E G Q+ GRED DVA + ++LEAEG+ + V G Sbjct: 183 YVGLELAQAYRRFGSAVTVIEHGAQIAGREDPDVASALAQLLEAEGLAIRTGTEVVRVRG 242 Query: 254 LSGDAITLTVQTNKGDQAVEGSDLLVAVGRVANVADIGLEKAGVELDARGYVRVTKRLET 313 SGDA+ +TV+ G+ + GS +LVA GR N IGL++AGV+L RG ++V RL T Sbjct: 243 RSGDAVEITVRDGGGEAVIAGSHILVAAGRAPNTGGIGLDRAGVDLTERGVIKVDDRLRT 302 Query: 314 TASGVWAIGECAGSPQFTHVSVDDFRIVRDNMAGGDRRTDDRLVPYVMFTDPPLARVGLS 373 +A GVWAIGECAGSP FTH S DDFR++RD++AG R T RL+P +FTDPPLARVG + Sbjct: 303 SAPGVWAIGECAGSPAFTHASADDFRVIRDDLAGIPRSTAGRLMPACLFTDPPLARVGST 362 Query: 374 EAEAERQGVEVRVAKLLMSRVLRTQATDETQGFMKAVISARDDRILGFTMIGSEAGEVMA 433 E EA +G VRVAKL M+ VLRT+ T +T+GFMKAVI DDRILGFTM+G+EAGEVMA Sbjct: 363 ETEARARGDAVRVAKLPMAAVLRTRTTGQTEGFMKAVIGP-DDRILGFTMLGAEAGEVMA 421 Query: 434 AVQTAMLGALPYTRLRDAVLTHLTMAEGLGPLLGNVP 470 AVQ AML LPYT LRDA+L H T AEGL L VP Sbjct: 422 AVQVAMLAGLPYTALRDAILAHPTTAEGLNSLFSAVP 458