BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0066.0055.p         (69 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC45630.1| 30S ribosomal protein S21 [Bradyrhizobium japoni...   122   1e-26
ref|NP_767005.2| 30S ribosomal protein S21 [Bradyrhizobium japon...   122   2e-26
ref|YP_004108302.1| 30S ribosomal protein S21 [Rhodopseudomonas ...   117   5e-25
ref|YP_001993499.1| 30S ribosomal protein S21 [Rhodopseudomonas ...   112   2e-23
ref|YP_001243308.1| 30S ribosomal protein S21 [Bradyrhizobium sp...    94   7e-18

>dbj|BAC45630.1| 30S ribosomal protein S21 [Bradyrhizobium japonicum USDA 110]
          Length = 106

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/68 (92%), Positives = 65/68 (95%)

Query: 1   MQREGVFREMKQRRAYEKPSERKTRERSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 60
           MQREGVFREMKQRR+YEKPSERKTRE+SEAIRRARKLARKQAIREGLLPAPPKKKLPERK
Sbjct: 35  MQREGVFREMKQRRSYEKPSERKTREKSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 94

Query: 61  PPLPQVTV 68
           PPLPQ   
Sbjct: 95  PPLPQTAA 102


>ref|NP_767005.2| 30S ribosomal protein S21 [Bradyrhizobium japonicum USDA 110]
 sp|Q89XE9.2|RS211_BRAJA RecName: Full=30S ribosomal protein S21 1
          Length = 92

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/68 (92%), Positives = 65/68 (95%)

Query: 1  MQREGVFREMKQRRAYEKPSERKTRERSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 60
          MQREGVFREMKQRR+YEKPSERKTRE+SEAIRRARKLARKQAIREGLLPAPPKKKLPERK
Sbjct: 21 MQREGVFREMKQRRSYEKPSERKTREKSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 80

Query: 61 PPLPQVTV 68
          PPLPQ   
Sbjct: 81 PPLPQTAA 88


>ref|YP_004108302.1| 30S ribosomal protein S21 [Rhodopseudomonas palustris DX-1]
 gb|ADU43569.1| ribosomal protein S21 [Rhodopseudomonas palustris DX-1]
          Length = 91

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/66 (89%), Positives = 65/66 (98%)

Query: 1  MQREGVFREMKQRRAYEKPSERKTRERSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 60
          MQREGVFREMKQRR+YEKPSERKTRERSEA+RRARKLARK+AIREGLLPAPPKKK+ ERK
Sbjct: 21 MQREGVFREMKQRRSYEKPSERKTRERSEAVRRARKLARKKAIREGLLPAPPKKKIVERK 80

Query: 61 PPLPQV 66
          PPLP++
Sbjct: 81 PPLPEI 86


>ref|YP_001993499.1| 30S ribosomal protein S21 [Rhodopseudomonas palustris TIE-1]
 gb|ACF03024.1| ribosomal protein S21 [Rhodopseudomonas palustris TIE-1]
          Length = 91

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/66 (89%), Positives = 64/66 (96%)

Query: 1  MQREGVFREMKQRRAYEKPSERKTRERSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 60
          MQREGVFREMKQRR+YEKPSERKTRE+SEA+RRARKLARK+AIREGLLPAPPKKK  ERK
Sbjct: 21 MQREGVFREMKQRRSYEKPSERKTREKSEAVRRARKLARKKAIREGLLPAPPKKKPFERK 80

Query: 61 PPLPQV 66
          PPLP+V
Sbjct: 81 PPLPEV 86


>ref|YP_001243308.1| 30S ribosomal protein S21 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39402.1| SSU ribosomal protein S21P [Bradyrhizobium sp. BTAi1]
          Length = 99

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/61 (83%), Positives = 55/61 (90%)

Query: 1  MQREGVFREMKQRRAYEKPSERKTRERSEAIRRARKLARKQAIREGLLPAPPKKKLPERK 60
          MQREGVFREMK+RRAYEKPSERKTRE+S+AIRR RK+ARKQAIREGLLPAP KK L  R 
Sbjct: 21 MQREGVFREMKRRRAYEKPSERKTREKSDAIRRQRKVARKQAIREGLLPAPVKKILQPRP 80

Query: 61 P 61
          P
Sbjct: 81 P 81