BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0043.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769970.1| N-carbamyl-D-amino acid amidohydrolase [Bradyrh... 567 e-159 ref|YP_001203899.1| N-carbamoyl-D-amino acid hydrolase [Bradyrhi... 522 e-146 ref|YP_001238199.1| N-carbamoyl-D-amino acid hydrolase [Bradyrhi... 516 e-144 ref|YP_001525404.1| N-carbamyl-D-amino acid amidohydrolase [Azor... 485 e-135 ref|ZP_00961275.1| N-carbamyl-D-amino acid amidohydrolase [Roseo... 468 e-130 >ref|NP_769970.1| N-carbamyl-D-amino acid amidohydrolase [Bradyrhizobium japonicum USDA 110] dbj|BAC48595.1| N-carbamyl-D-amino acid amidohydrolase [Bradyrhizobium japonicum USDA 110] Length = 310 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 262/310 (84%), Positives = 290/310 (93%) Query: 1 MRVINVAAAQMGPIQKADSREAVVKRMIALMDQAKARGADLIVYPELALTTFFPRWYMTD 60 MR++NVAAAQMGPIQKADSREAVVKRMIALMD+AKA+GADLIVYPELALTTFFPRWY+ D Sbjct: 1 MRIVNVAAAQMGPIQKADSREAVVKRMIALMDEAKAKGADLIVYPELALTTFFPRWYVED 60 Query: 61 QSEVDRWFEREMPNAATMPLFERAALHQIAMNFGYAELTPDGHHFNTSILTDKSARIVGK 120 ++E D WFEREMP+AAT PLFERAA HQ+AMNFGYAELTPDGHHFNT+ILTDKS RIVGK Sbjct: 61 RAEFDNWFEREMPSAATKPLFERAAQHQMAMNFGYAELTPDGHHFNTAILTDKSGRIVGK 120 Query: 121 YRKVHLPGHAEFDAERAFQHLEKRYFEPGDLGFNVWRELDGILGMAICNDRRWPETYRVM 180 YRK+HLPGH E+D +R+ QHLEKRYFEPGDLGF VWREL GI+GMAICNDRRWPETYRVM Sbjct: 121 YRKIHLPGHVEYDTKRSHQHLEKRYFEPGDLGFKVWRELGGIIGMAICNDRRWPETYRVM 180 Query: 181 GLQGVEMVMIGYNTPSVNAEKSEEGPAKRLFHNRLSVQAGAYQNSTWVVCVAKAGVEDGH 240 GLQGVEMV+IGYNTPSVNAEKSEEG KRLFHNRLSVQAGAYQN+TWVV VAKAG EDGH Sbjct: 181 GLQGVEMVLIGYNTPSVNAEKSEEGVEKRLFHNRLSVQAGAYQNATWVVAVAKAGNEDGH 240 Query: 241 PLIGGTLIVNPDGEIVVEAKTEEDELLVHSCDLDATAFGKSTIFNFAQHRRIEHYGLITS 300 PL GG+LIV+P+GEIV EAKT++DE+LVH+CDLDAT FGK+TIF+FA+HRRIEHYGLITS Sbjct: 241 PLFGGSLIVDPNGEIVAEAKTDDDEVLVHACDLDATTFGKTTIFDFARHRRIEHYGLITS 300 Query: 301 RTGAQPPPEN 310 +TGA PPPE Sbjct: 301 QTGAVPPPEK 310 >ref|YP_001203899.1| N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. ORS 278] emb|CAL75662.1| N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) [Bradyrhizobium sp. ORS 278] Length = 308 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 245/307 (79%), Positives = 273/307 (88%) Query: 1 MRVINVAAAQMGPIQKADSREAVVKRMIALMDQAKARGADLIVYPELALTTFFPRWYMTD 60 MR+INVAAAQMGPIQ+ADSREAVV RMIAL+D+AK +GADLIVYPELALTTFFPRWYM D Sbjct: 1 MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMED 60 Query: 61 QSEVDRWFEREMPNAATMPLFERAALHQIAMNFGYAELTPDGHHFNTSILTDKSARIVGK 120 Q+EVD WFER+MPNAA PLF+RAA H+IAM GYAELT DGHH+NT++LTD+S+ IVGK Sbjct: 61 QAEVDTWFERDMPNAAVQPLFDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNIVGK 120 Query: 121 YRKVHLPGHAEFDAERAFQHLEKRYFEPGDLGFNVWRELDGILGMAICNDRRWPETYRVM 180 YRKVHLPGH EF+ ER+ QHLEKRYFEPGDLGF VWR L GI+GMAICNDRRWPETYRVM Sbjct: 121 YRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFPVWRNLGGIVGMAICNDRRWPETYRVM 180 Query: 181 GLQGVEMVMIGYNTPSVNAEKSEEGPAKRLFHNRLSVQAGAYQNSTWVVCVAKAGVEDGH 240 GLQ VE+V+IGYNTPSVN+ KS EG +RLFHNRLS QAGAYQNS WVV VAKAGVEDGH Sbjct: 181 GLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH 240 Query: 241 PLIGGTLIVNPDGEIVVEAKTEEDELLVHSCDLDATAFGKSTIFNFAQHRRIEHYGLITS 300 LIGG+LIVNPDGEIV EA T DE+LV +CD+DAT FGK TIF+FA+HRR+EHYGLITS Sbjct: 241 HLIGGSLIVNPDGEIVAEAVTAGDEVLVAACDMDATRFGKQTIFDFARHRRVEHYGLITS 300 Query: 301 RTGAQPP 307 RTGA PP Sbjct: 301 RTGAVPP 307 >ref|YP_001238199.1| N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. BTAi1] gb|ABQ34293.1| N-carbamoyl-D-amino acid hydrolase (D-N-alpha- carbamilase) [Bradyrhizobium sp. BTAi1] Length = 308 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 242/307 (78%), Positives = 269/307 (87%) Query: 1 MRVINVAAAQMGPIQKADSREAVVKRMIALMDQAKARGADLIVYPELALTTFFPRWYMTD 60 MRVIN+AAAQMGPIQ+ADSR AVV RMIAL+D+AK +GADLI+YPELALTTFFPRWYM D Sbjct: 1 MRVINIAAAQMGPIQRADSRAAVVMRMIALLDEAKRKGADLIIYPELALTTFFPRWYMED 60 Query: 61 QSEVDRWFEREMPNAATMPLFERAALHQIAMNFGYAELTPDGHHFNTSILTDKSARIVGK 120 Q+EVD WFE+ MPN A PLF+RAA H IAM GYAELTPDGHH+NT++LTD+++ I+GK Sbjct: 61 QAEVDTWFEKTMPNEAVQPLFDRAAQHGIAMYLGYAELTPDGHHYNTAVLTDRNSTIIGK 120 Query: 121 YRKVHLPGHAEFDAERAFQHLEKRYFEPGDLGFNVWRELDGILGMAICNDRRWPETYRVM 180 YRKVHLPGH EF+ R+ QHLEKRYFEPGDLGF VWR L GI+GMAICNDRRWPETYRVM Sbjct: 121 YRKVHLPGHDEFEPARSHQHLEKRYFEPGDLGFPVWRNLGGIIGMAICNDRRWPETYRVM 180 Query: 181 GLQGVEMVMIGYNTPSVNAEKSEEGPAKRLFHNRLSVQAGAYQNSTWVVCVAKAGVEDGH 240 GLQ VE+V+IGYNTPSVN+ KS EG +RLFHNRLS QAGAYQNS WVV VAKAGVEDGH Sbjct: 181 GLQDVELVLIGYNTPSVNSLKSAEGLQQRLFHNRLSAQAGAYQNSCWVVAVAKAGVEDGH 240 Query: 241 PLIGGTLIVNPDGEIVVEAKTEEDELLVHSCDLDATAFGKSTIFNFAQHRRIEHYGLITS 300 LIGGTLIVNPDGEIV EA TE DE+LV CDLDAT FGK TIF+FA+HRR+EHYGLITS Sbjct: 241 HLIGGTLIVNPDGEIVAEAATEGDEVLVVPCDLDATRFGKQTIFDFARHRRVEHYGLITS 300 Query: 301 RTGAQPP 307 RTGA PP Sbjct: 301 RTGAVPP 307 >ref|YP_001525404.1| N-carbamyl-D-amino acid amidohydrolase [Azorhizobium caulinodans ORS 571] dbj|BAF88486.1| N-carbamyl-D-amino acid amidohydrolase [Azorhizobium caulinodans ORS 571] Length = 310 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 223/309 (72%), Positives = 262/309 (84%) Query: 1 MRVINVAAAQMGPIQKADSREAVVKRMIALMDQAKARGADLIVYPELALTTFFPRWYMTD 60 MR I VAAAQ+G IQKA+SREAVV RM+ALM QAKA G +LIVYPELALTTFFPRWY + Sbjct: 1 MREIKVAAAQLGAIQKAESREAVVGRMLALMAQAKAAGCNLIVYPELALTTFFPRWYHEN 60 Query: 61 QSEVDRWFEREMPNAATMPLFERAALHQIAMNFGYAELTPDGHHFNTSILTDKSARIVGK 120 ++E D WFE MPN AT PLF+ A + +AM+FGYAELTPDGHHFNTSIL D IVGK Sbjct: 61 RAEADVWFESAMPNEATQPLFDAAREYGMAMSFGYAELTPDGHHFNTSILVDDKGNIVGK 120 Query: 121 YRKVHLPGHAEFDAERAFQHLEKRYFEPGDLGFNVWRELDGILGMAICNDRRWPETYRVM 180 YRK+HLPGHAE+D +R+ QHLEKRYFEPGDLGFNVWR + GI GMAICNDRRWPETYR M Sbjct: 121 YRKIHLPGHAEYDHDRSHQHLEKRYFEPGDLGFNVWRTMGGIFGMAICNDRRWPETYREM 180 Query: 181 GLQGVEMVMIGYNTPSVNAEKSEEGPAKRLFHNRLSVQAGAYQNSTWVVCVAKAGVEDGH 240 GLQGVEM+++G+NTPSVN +K E A+R+FH++LSVQAGAYQNSTWV+ VAKAG EDGH Sbjct: 181 GLQGVEMILLGFNTPSVNGQKGAEAHAQRMFHHKLSVQAGAYQNSTWVIAVAKAGSEDGH 240 Query: 241 PLIGGTLIVNPDGEIVVEAKTEEDELLVHSCDLDATAFGKSTIFNFAQHRRIEHYGLITS 300 L+GGT+IVNPDGEIV E++TE+DEL++ +CDLDAT FGK T+F+FA+HRRIEHYG I + Sbjct: 241 HLMGGTVIVNPDGEIVAESRTEDDELVIAACDLDATVFGKETVFDFARHRRIEHYGRINT 300 Query: 301 RTGAQPPPE 309 +TG PPE Sbjct: 301 QTGVILPPE 309 >ref|ZP_00961275.1| N-carbamyl-D-amino acid amidohydrolase [Roseovarius nubinhibens ISM] gb|EAP75515.1| N-carbamyl-D-amino acid amidohydrolase [Roseovarius nubinhibens ISM] Length = 308 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 221/307 (71%), Positives = 260/307 (84%) Query: 1 MRVINVAAAQMGPIQKADSREAVVKRMIALMDQAKARGADLIVYPELALTTFFPRWYMTD 60 MR I + AQMGPIQKAD+RE VV RMIAL+ QAK G DL+V+PEL LTTFFPRWYM D Sbjct: 1 MREIVIGGAQMGPIQKADTREEVVDRMIALLQQAKGAGCDLVVFPELCLTTFFPRWYMED 60 Query: 61 QSEVDRWFEREMPNAATMPLFERAALHQIAMNFGYAELTPDGHHFNTSILTDKSARIVGK 120 Q+EVD+WFEREMPNAAT PLF A QIA++FGYAELTP+G HFNTSILTD+ IVGK Sbjct: 61 QAEVDQWFEREMPNAATAPLFAAAREAQIAISFGYAELTPEGRHFNTSILTDRDGNIVGK 120 Query: 121 YRKVHLPGHAEFDAERAFQHLEKRYFEPGDLGFNVWRELDGILGMAICNDRRWPETYRVM 180 YRK HLPGH+EFD +RAFQHLEKRYFEPGD GF VWR +D I+GM ICNDRRWPETYRVM Sbjct: 121 YRKTHLPGHSEFDHDRAFQHLEKRYFEPGDTGFQVWRNMDAIMGMCICNDRRWPETYRVM 180 Query: 181 GLQGVEMVMIGYNTPSVNAEKSEEGPAKRLFHNRLSVQAGAYQNSTWVVCVAKAGVEDGH 240 GLQGVE+VM+GYNTPSVN++ S EG KRL+H+ LS+ + AYQN+TWVV VAKAG EDGH Sbjct: 181 GLQGVELVMLGYNTPSVNSQDSVEGLEKRLYHSELSMTSAAYQNATWVVGVAKAGDEDGH 240 Query: 241 PLIGGTLIVNPDGEIVVEAKTEEDELLVHSCDLDATAFGKSTIFNFAQHRRIEHYGLITS 300 PL+GG++IV+P+G ++ A+TE DEL+VH+CD+DA +FGKSTIF+FA+HRRIEHYGLI S Sbjct: 241 PLMGGSMIVDPNGYVMARAETEGDELIVHACDMDACSFGKSTIFDFARHRRIEHYGLICS 300 Query: 301 RTGAQPP 307 +TG P Sbjct: 301 QTGVVLP 307