BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0066.0041.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08071892.1| urea amidolyase related protein [Methylocysti...   103   1e-20
ref|YP_002496415.1| urea amidolyase related protein [Methylobact...   102   3e-20
ref|YP_001416400.1| urea amidolyase-like protein [Xanthobacter a...   100   9e-20
ref|ZP_06890049.1| urea amidolyase related protein [Methylosinus...   100   9e-20
ref|YP_001769029.1| urea amidolyase related protein [Methylobact...    99   2e-19

>ref|ZP_08071892.1| urea amidolyase related protein [Methylocystis sp. ATCC 49242]
 gb|EFY00649.1| urea amidolyase related protein [Methylocystis sp. ATCC 49242]
          Length = 332

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/75 (70%), Positives = 58/75 (77%), Gaps = 4/75 (5%)

Query: 14  DIINNSYDLGIAMGAIQVPGDGRPIVLMADRQSTGGYPKIATVIGPDLGRLAQARPGTTF 73
           DI+++    G AMGA+Q+PG G P VLMADRQ TGGYPKIA VIG DLGRLAQ RPG   
Sbjct: 224 DIVSD----GAAMGAVQIPGSGAPFVLMADRQPTGGYPKIACVIGADLGRLAQLRPGERL 279

Query: 74  RFEAVSIEEAVAARR 88
           RF AVS EEAVAARR
Sbjct: 280 RFRAVSWEEAVAARR 294


>ref|YP_002496415.1| urea amidolyase related protein [Methylobacterium nodulans ORS
           2060]
 gb|ACL56112.1| urea amidolyase related protein [Methylobacterium nodulans ORS
           2060]
          Length = 339

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 54/58 (93%)

Query: 23  GIAMGAIQVPGDGRPIVLMADRQSTGGYPKIATVIGPDLGRLAQARPGTTFRFEAVSI 80
           GIAMGA+QVPG+G+PI+LMADRQSTGGYPKIATVIGPDLGRLAQA+ G   RFEAVSI
Sbjct: 235 GIAMGAVQVPGEGKPIILMADRQSTGGYPKIATVIGPDLGRLAQAQAGIRLRFEAVSI 292


>ref|YP_001416400.1| urea amidolyase-like protein [Xanthobacter autotrophicus Py2]
 gb|ABS66743.1| urea amidolyase related protein [Xanthobacter autotrophicus Py2]
          Length = 344

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/86 (63%), Positives = 59/86 (68%)

Query: 18  NSYDLGIAMGAIQVPGDGRPIVLMADRQSTGGYPKIATVIGPDLGRLAQARPGTTFRFEA 77
           N    GIA GAIQVPG+G PIV MADR  TGGYPKIATVIG DLG  AQ RPG +FRF A
Sbjct: 232 NIVSDGIAHGAIQVPGEGLPIVQMADRAPTGGYPKIATVIGADLGSFAQLRPGASFRFAA 291

Query: 78  VSIEEAVAARRQEARAGAGHCRRAAI 103
           V I  AVAARR +A A A    R  +
Sbjct: 292 VDIATAVAARRAQAEALARPVERVPL 317


>ref|ZP_06890049.1| urea amidolyase related protein [Methylosinus trichosporium OB3b]
 gb|EFH01459.1| urea amidolyase related protein [Methylosinus trichosporium OB3b]
          Length = 339

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 4/75 (5%)

Query: 14  DIINNSYDLGIAMGAIQVPGDGRPIVLMADRQSTGGYPKIATVIGPDLGRLAQARPGTTF 73
           DI+++    G+A+GAIQ PGDG P+VLMADRQ TGGYPKIA VIG D+ RLAQ RPG T 
Sbjct: 230 DIVSD----GVALGAIQAPGDGAPLVLMADRQPTGGYPKIANVIGADIARLAQKRPGETL 285

Query: 74  RFEAVSIEEAVAARR 88
            F AV++EEAV  RR
Sbjct: 286 SFTAVTVEEAVGLRR 300


>ref|YP_001769029.1| urea amidolyase related protein [Methylobacterium sp. 4-46]
 gb|ACA16595.1| urea amidolyase related protein [Methylobacterium sp. 4-46]
          Length = 359

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/63 (77%), Positives = 56/63 (88%), Gaps = 4/63 (6%)

Query: 14  DIINNSYDLGIAMGAIQVPGDGRPIVLMADRQSTGGYPKIATVIGPDLGRLAQARPGTTF 73
           DI+++    GIAMGA+QVPG+GRPIVLMADRQSTGGYPKIATVIGPDLGRLAQA+ GT  
Sbjct: 230 DIVSD----GIAMGAVQVPGEGRPIVLMADRQSTGGYPKIATVIGPDLGRLAQAQAGTRL 285

Query: 74  RFE 76
           RF+
Sbjct: 286 RFQ 288