BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0037.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769982.1| ABC transporter permease protein [Bradyrhizobiu... 558 e-157 ref|YP_001205062.1| putative oligopeptide/dipeptide ABC transpor... 550 e-154 ref|YP_001241024.1| putative ABC transporter permease [Bradyrhiz... 530 e-148 ref|YP_001524930.1| ABC transporter permease [Azorhizobium cauli... 513 e-143 ref|ZP_06897902.1| dipeptide ABC superfamily ATP binding cassett... 512 e-143 >ref|NP_769982.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48607.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 280/313 (89%), Positives = 302/313 (96%) Query: 1 MVSYILRRILATLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRQSLGLDRP 60 M+SYILRRI+ATLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASP DVERIRQSLGLDRP Sbjct: 1 MLSYILRRIVATLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPEDVERIRQSLGLDRP 60 Query: 61 FLVQFGSWLWHILHGDLGTSIFTSLPVSTLIAQRIEPTLSLMVLTLLLTILVAVPLGVVA 120 FL+QFGSW+W ILHGDLGTSIFT+LPVST+I QR+ PTLSLM++TLLLTI+VAVPLGVVA Sbjct: 61 FLIQFGSWVWRILHGDLGTSIFTNLPVSTMIGQRLGPTLSLMIVTLLLTIVVAVPLGVVA 120 Query: 121 AWKAGSWLDRTIMTFAVFGFSLPVFVVGYVLAYVFALKFEWLPVQGYTPLSEGFWPWLQN 180 AWKAGS +DR IM FAVFGFSLPVFVVGY+L+Y+FAL+ EWLPVQGYTPL++GFWPWL+N Sbjct: 121 AWKAGSLIDRVIMGFAVFGFSLPVFVVGYMLSYIFALELEWLPVQGYTPLAQGFWPWLEN 180 Query: 181 LILPAVALGCVYIALIARITRASMLEVLQQDYIRTARAKGLGMRNILFVHALKNAAVPIV 240 LILPAVALGCVYIALIARITRA+MLEVLQQDYIRTARAKGLG ILFVHALKNAAVPIV Sbjct: 181 LILPAVALGCVYIALIARITRATMLEVLQQDYIRTARAKGLGQGGILFVHALKNAAVPIV 240 Query: 241 TVIGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFLYVLVNLMV 300 TVIGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSF+YVLVNLM+ Sbjct: 241 TVIGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFVYVLVNLMI 300 Query: 301 DVVYTLVDPRIRY 313 DV+YTLVDPRIRY Sbjct: 301 DVIYTLVDPRIRY 313 >ref|YP_001205062.1| putative oligopeptide/dipeptide ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL76825.1| putative ABC transporter permease protein; putative oligopeptide/dipeptide transport protein [Bradyrhizobium sp. ORS 278] Length = 313 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 272/313 (86%), Positives = 301/313 (96%) Query: 1 MVSYILRRILATLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRQSLGLDRP 60 M+SY LRR+L+TLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIR +LGLD+P Sbjct: 1 MLSYALRRVLSTLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRANLGLDQP 60 Query: 61 FLVQFGSWLWHILHGDLGTSIFTSLPVSTLIAQRIEPTLSLMVLTLLLTILVAVPLGVVA 120 FLVQFGSW+W +LH DLGTSIFT+LPVS +IAQRIEPTLSLM++TL+LTIL+AVPLGV+A Sbjct: 61 FLVQFGSWVWRLLHFDLGTSIFTNLPVSAMIAQRIEPTLSLMMVTLVLTILIAVPLGVIA 120 Query: 121 AWKAGSWLDRTIMTFAVFGFSLPVFVVGYVLAYVFALKFEWLPVQGYTPLSEGFWPWLQN 180 AWKAG+W+DR IM FAVFGFS+PVFVVGY+LAYVFALKF+ LPVQGYTPL++GFWPWLQN Sbjct: 121 AWKAGTWIDRVIMAFAVFGFSVPVFVVGYILAYVFALKFDLLPVQGYTPLAQGFWPWLQN 180 Query: 181 LILPAVALGCVYIALIARITRASMLEVLQQDYIRTARAKGLGMRNILFVHALKNAAVPIV 240 LILPAVALGCVYIALIARITRA+MLEVLQQD+IRTARAKGLG ILF+HALKNAAVPIV Sbjct: 181 LILPAVALGCVYIALIARITRAAMLEVLQQDFIRTARAKGLGQGGILFIHALKNAAVPIV 240 Query: 241 TVIGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFLYVLVNLMV 300 TV+GIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSF+YVLVNL++ Sbjct: 241 TVVGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFVYVLVNLLI 300 Query: 301 DVVYTLVDPRIRY 313 D+ YTLVDPRIRY Sbjct: 301 DITYTLVDPRIRY 313 >ref|YP_001241024.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ37118.1| putative ABC transporter permease protein [Bradyrhizobium sp. BTAi1] Length = 298 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 263/298 (88%), Positives = 287/298 (96%) Query: 16 MAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRQSLGLDRPFLVQFGSWLWHILHG 75 MAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIR +LGLD+PFLVQFGSW+W +LH Sbjct: 1 MAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRANLGLDQPFLVQFGSWVWRLLHF 60 Query: 76 DLGTSIFTSLPVSTLIAQRIEPTLSLMVLTLLLTILVAVPLGVVAAWKAGSWLDRTIMTF 135 DLGTSIFT+LPVS +IAQRIEPTLSLM++TL+LTIL+AVPLGV+AAWKAG+W+DR IM F Sbjct: 61 DLGTSIFTNLPVSAMIAQRIEPTLSLMMVTLVLTILIAVPLGVIAAWKAGTWIDRVIMAF 120 Query: 136 AVFGFSLPVFVVGYVLAYVFALKFEWLPVQGYTPLSEGFWPWLQNLILPAVALGCVYIAL 195 AVFGFS+PVFVVGY+LAYVFALKF+ LPVQGYTPL++GFWPWLQNLILPAVALGCVYIAL Sbjct: 121 AVFGFSVPVFVVGYILAYVFALKFDLLPVQGYTPLAQGFWPWLQNLILPAVALGCVYIAL 180 Query: 196 IARITRASMLEVLQQDYIRTARAKGLGMRNILFVHALKNAAVPIVTVIGIGIALLIGGAV 255 IARITRA+MLEVLQQDYIRTARAKGLG ILF+HALKNAAVPIVTV+GIGIALLIGGAV Sbjct: 181 IARITRAAMLEVLQQDYIRTARAKGLGQGGILFIHALKNAAVPIVTVVGIGIALLIGGAV 240 Query: 256 VTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFLYVLVNLMVDVVYTLVDPRIRY 313 VTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSF+YVLVNL++DV YTLVDPRIRY Sbjct: 241 VTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFVYVLVNLLIDVTYTLVDPRIRY 298 >ref|YP_001524930.1| ABC transporter permease [Azorhizobium caulinodans ORS 571] dbj|BAF88012.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 313 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 246/313 (78%), Positives = 285/313 (91%) Query: 1 MVSYILRRILATLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRQSLGLDRP 60 M+ YILRR L+T+PVMA+V LFVFSLLYIAPGDPA VIAGDQASPAD+ RIR +LGLDRP Sbjct: 1 MLGYILRRTLSTIPVMAMVGLFVFSLLYIAPGDPAAVIAGDQASPADIARIRANLGLDRP 60 Query: 61 FLVQFGSWLWHILHGDLGTSIFTSLPVSTLIAQRIEPTLSLMVLTLLLTILVAVPLGVVA 120 FLVQFG W W LH DLGTSIFT+LPV+ +I QRIEPT+SLM++TL+ I++AVP+GVVA Sbjct: 61 FLVQFGEWAWRTLHADLGTSIFTNLPVTQMIGQRIEPTVSLMLVTLIFAIIIAVPMGVVA 120 Query: 121 AWKAGSWLDRTIMTFAVFGFSLPVFVVGYVLAYVFALKFEWLPVQGYTPLSEGFWPWLQN 180 AWKAG+W+DR IMTFAV GFS+PVFV+GYVLAY FAL+ +W PVQGYTP++EG PWL N Sbjct: 121 AWKAGTWVDRAIMTFAVLGFSVPVFVIGYVLAYTFALQLDWFPVQGYTPIAEGIGPWLSN 180 Query: 181 LILPAVALGCVYIALIARITRASMLEVLQQDYIRTARAKGLGMRNILFVHALKNAAVPIV 240 L+LPA++LGCVYIALIARITRASMLEVL QDY+RTA+AKGLG +LF+HALKNAAVPIV Sbjct: 181 LVLPAISLGCVYIALIARITRASMLEVLAQDYVRTAKAKGLGQGGVLFIHALKNAAVPIV 240 Query: 241 TVIGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFLYVLVNLMV 300 TVIGIGIALLIGGAVVTESVFAIPGLGRLT+DAILRRDYPVIQG+VLLFSF+YVLVNL++ Sbjct: 241 TVIGIGIALLIGGAVVTESVFAIPGLGRLTVDAILRRDYPVIQGVVLLFSFVYVLVNLII 300 Query: 301 DVVYTLVDPRIRY 313 D++YT +DPRIRY Sbjct: 301 DILYTFLDPRIRY 313 >ref|ZP_06897902.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gb|EFH10406.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 313 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 251/313 (80%), Positives = 286/313 (91%) Query: 1 MVSYILRRILATLPVMAIVALFVFSLLYIAPGDPAVVIAGDQASPADVERIRQSLGLDRP 60 M +YI+RR+LAT+PVMAIVALFVFSLLYIAPGDPA VIAGDQA+PADVERIR SLGLDRP Sbjct: 1 MFAYIVRRVLATIPVMAIVALFVFSLLYIAPGDPAAVIAGDQATPADVERIRASLGLDRP 60 Query: 61 FLVQFGSWLWHILHGDLGTSIFTSLPVSTLIAQRIEPTLSLMVLTLLLTILVAVPLGVVA 120 FLV+FG W++ IL GDLG SIFT+LPV+ +IAQRIEPTLSLM++TL+L + +AVP+GVVA Sbjct: 61 FLVRFGEWVFRILQGDLGVSIFTNLPVTRMIAQRIEPTLSLMIVTLILAVTIAVPMGVVA 120 Query: 121 AWKAGSWLDRTIMTFAVFGFSLPVFVVGYVLAYVFALKFEWLPVQGYTPLSEGFWPWLQN 180 AWKAGSW+DR +M FAV GFS+PVFVVGY+LAY FAL+ +W PVQGYTP S GF PWL N Sbjct: 121 AWKAGSWIDRCVMAFAVLGFSVPVFVVGYLLAYYFALELDWFPVQGYTPFSRGFGPWLSN 180 Query: 181 LILPAVALGCVYIALIARITRASMLEVLQQDYIRTARAKGLGMRNILFVHALKNAAVPIV 240 L+LP+VALG VYIALIARITRA+MLEVLQQDYIRTARAKG G +LFVHALKNAAVPIV Sbjct: 181 LVLPSVALGGVYIALIARITRATMLEVLQQDYIRTARAKGAGQTTLLFVHALKNAAVPIV 240 Query: 241 TVIGIGIALLIGGAVVTESVFAIPGLGRLTIDAILRRDYPVIQGIVLLFSFLYVLVNLMV 300 TVIGIG+ALLIGGAVVTESVFAIPGLGRLT+DAILRRDYPVIQG++LLFSF+YVLVNL++ Sbjct: 241 TVIGIGVALLIGGAVVTESVFAIPGLGRLTVDAILRRDYPVIQGVILLFSFVYVLVNLLI 300 Query: 301 DVVYTLVDPRIRY 313 D+ YTL DPRIRY Sbjct: 301 DLSYTLFDPRIRY 313