BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0034.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769984.1| ABC transporter ATP-binding protein [Bradyrhizo... 405 e-111 ref|YP_001205064.1| ABC transporter ATP-binding protein oligo/di... 398 e-109 ref|YP_001241022.1| putative ABC transporter ATP-binding protein... 396 e-108 ref|YP_001524928.1| oligopeptide ABC transporter ATP-binding pro... 387 e-105 ref|ZP_06897900.1| ABC superfamily ATP binding cassette transpor... 379 e-103 >ref|NP_769984.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48609.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 347 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/259 (79%), Positives = 217/259 (83%), Gaps = 27/259 (10%) Query: 1 MALLEVENLQTHFRTPDGINRAVDGVSFQVAEGETLAIVGESGCGKSVTSMSLMRLIPEP 60 MALLEVENLQ HFRTP GINRAVDGVSF V EGETLAIVGESGCGKSVTSMSLMRLIPEP Sbjct: 19 MALLEVENLQAHFRTPSGINRAVDGVSFHVNEGETLAIVGESGCGKSVTSMSLMRLIPEP 78 Query: 61 PGRIAGAVRFQGRDLLQLSEREMRGIRGNDISMIFQEPMSSLNPVLTVGRQIGETLRLHQ 120 PG+IAG++RF GRDLL+LS+REMR IRGNDISMIFQEPM+SLNPVLTVGRQI ETL +HQ Sbjct: 79 PGKIAGSIRFAGRDLLKLSDREMRAIRGNDISMIFQEPMTSLNPVLTVGRQIRETLMIHQ 138 Query: 121 GLDKQAAEARAVEMLNLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEP 180 GLDKQAAEA A+EML LVGIPEP RRVREYPHQLSGGMRQRVMIA+ALACNPKLLIADEP Sbjct: 139 GLDKQAAEAHAIEMLTLVGIPEPKRRVREYPHQLSGGMRQRVMIAVALACNPKLLIADEP 198 Query: 181 TTALDVTIQAQILQLMLELKRSVGAX---------------------------EEAPVAA 213 TTALDVTIQAQIL+LML+LK VGA EEAPVA Sbjct: 199 TTALDVTIQAQILKLMLDLKSRVGAAIILITHDLGVVAEIAERVMVMYAGRKVEEAPVAE 258 Query: 214 LFRSPRHPYTQGLLGAVPR 232 LFRSPRHPYTQGLLGAVPR Sbjct: 259 LFRSPRHPYTQGLLGAVPR 277 >ref|YP_001205064.1| ABC transporter ATP-binding protein oligo/dipeptide transport protein [Bradyrhizobium sp. ORS 278] emb|CAL76827.1| ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein [Bradyrhizobium sp. ORS 278] Length = 329 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 218/329 (66%), Positives = 239/329 (72%), Gaps = 48/329 (14%) Query: 1 MALLEVENLQTHFRTPDGINRAVDGVSFQVAEGETLAIVGESGCGKSVTSMSLMRLIPEP 60 M LLEVENLQ HFRTP GINRAVDGVSF V GETLAIVGESGCGKSVTSMS+MRLIPEP Sbjct: 1 MPLLEVENLQVHFRTPTGINRAVDGVSFHVNPGETLAIVGESGCGKSVTSMSMMRLIPEP 60 Query: 61 PGRIAGAVRFQGRDLLQLSEREMRGIRGNDISMIFQEPMSSLNPVLTVGRQIGETLRLHQ 120 PG+IAG+++ +GRD+L LS+REMR +RGNDISMIFQEPM+SLNPVLTVGRQIGETLRLHQ Sbjct: 61 PGKIAGSIKLEGRDILSLSDREMRALRGNDISMIFQEPMTSLNPVLTVGRQIGETLRLHQ 120 Query: 121 GLDKQAAEARAVEMLNLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEP 180 GLD+ AEARAVEML LVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEP Sbjct: 121 GLDQAQAEARAVEMLTLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEP 180 Query: 181 TTALDVTIQAQILQLMLELKRSVGAX---------------------------EEAPVAA 213 TTALDVTIQAQIL+LMLELK+ VGA EEAPV Sbjct: 181 TTALDVTIQAQILKLMLELKQRVGAAIILITHDLGVVAEVAERVMVMYAGRKVEEAPVKE 240 Query: 214 LFRSPRHPYTQGLLGAVPRX---------------PQAGDRGLRLCRAVRACNRSLPSG- 257 LFRSPRHPYTQGLLGA+P+ Q D R+ V A +L + Sbjct: 241 LFRSPRHPYTQGLLGALPKLGSSLSGETKRLAEIPGQVPDLKQRIDGCVFAGRCALATDL 300 Query: 258 --RAGPRREGXPP---PPCHYSAKEAAAA 281 + P E P CH++AKE AAA Sbjct: 301 CRQYAPGLEQKAPHHIAACHFAAKEQAAA 329 >ref|YP_001241022.1| putative ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37116.1| putative ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] Length = 327 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 217/327 (66%), Positives = 238/327 (72%), Gaps = 48/327 (14%) Query: 3 LLEVENLQTHFRTPDGINRAVDGVSFQVAEGETLAIVGESGCGKSVTSMSLMRLIPEPPG 62 +LEVENLQ HFRTP GINRAVDGVSF V GETLAIVGESGCGKSVTSMS+MRLIPEPPG Sbjct: 1 MLEVENLQVHFRTPTGINRAVDGVSFHVDPGETLAIVGESGCGKSVTSMSMMRLIPEPPG 60 Query: 63 RIAGAVRFQGRDLLQLSEREMRGIRGNDISMIFQEPMSSLNPVLTVGRQIGETLRLHQGL 122 +IAG++R +GRD+L LS+REMR +RGNDISMIFQEPM+SLNPVLTVGRQIGETLRLHQGL Sbjct: 61 KIAGSIRLEGRDILALSDREMRALRGNDISMIFQEPMTSLNPVLTVGRQIGETLRLHQGL 120 Query: 123 DKQAAEARAVEMLNLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEPTT 182 D+ AEARAVEML LVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEPTT Sbjct: 121 DQAQAEARAVEMLTLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEPTT 180 Query: 183 ALDVTIQAQILQLMLELKRSVGAX---------------------------EEAPVAALF 215 ALDVTIQAQIL+LMLELK+ VGA EEAPV LF Sbjct: 181 ALDVTIQAQILKLMLELKQRVGAAIILITHDLGVVAEVAERVMVMYAGRKVEEAPVKQLF 240 Query: 216 RSPRHPYTQGLLGAVPRX---------------PQAGDRGLRLCRAVRACNRSLPSG--- 257 RSPRHPYTQGLLGA+P+ Q D R+ V A +L + Sbjct: 241 RSPRHPYTQGLLGALPKLGSSLSGETRRLAEIPGQVPDLKQRIEGCVFAGRCALATDLCR 300 Query: 258 RAGPRREGXPP---PPCHYSAKEAAAA 281 + P E P CH++AKE AAA Sbjct: 301 QYAPGLEQKAPHHIAACHFAAKEQAAA 327 >ref|YP_001524928.1| oligopeptide ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF88010.1| oligopeptide ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS 571] Length = 331 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 212/332 (63%), Positives = 238/332 (71%), Gaps = 54/332 (16%) Query: 1 MALLEVENLQTHFRTPDGINRAVDGVSFQVAEGETLAIVGESGCGKSVTSMSLMRLIPEP 60 MALLEVENLQ HFRTP G+NRAV+GVSF V EGETLAIVGESGCGKSVTSMS++RLIPEP Sbjct: 3 MALLEVENLQVHFRTPGGVNRAVNGVSFHVEEGETLAIVGESGCGKSVTSMSMLRLIPEP 62 Query: 61 PGRIAGAVRFQGRDLLQLSEREMRGIRGNDISMIFQEPMSSLNPVLTVGRQIGETLRLHQ 120 PG+IAGAVRF GRDLL+LS++EMR IRGN+ISMIFQEPM+SLNPVLTVGRQIGETLRLHQ Sbjct: 63 PGKIAGAVRFAGRDLLKLSDKEMRAIRGNEISMIFQEPMTSLNPVLTVGRQIGETLRLHQ 122 Query: 121 GLDKQAAEARAVEMLNLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADEP 180 GLD AAEA+AVEML+LVGIP P RRV+EYPHQLSGGMRQRVMIA+ALACNP+LLIADEP Sbjct: 123 GLDATAAEAKAVEMLSLVGIPAPERRVKEYPHQLSGGMRQRVMIAIALACNPRLLIADEP 182 Query: 181 TTALDVTIQAQILQLMLELKRSVGAX---------------------------EEAPVAA 213 TTALDVTIQAQIL LM +LK VGA EEAPV Sbjct: 183 TTALDVTIQAQILDLMRDLKSRVGAAIVLITHDLGVVAEVAERVMVMYAGRKVEEAPVRE 242 Query: 214 LFRSPRHPYTQGLLGAVP-----------RXPQAGDRGLRLCRAVRACNRSLPSGRA--- 259 LF +PRHPYT+GLLGAVP R + + L + ++ C + +GR Sbjct: 243 LFANPRHPYTRGLLGAVPKLGSSLQGETSRLAEIPGQVPSLTKPIQGC---VFAGRCAIA 299 Query: 260 -------GPRREGXPP---PPCHYSAKEAAAA 281 P E P CHY+ KEAAAA Sbjct: 300 TDVCRTWAPALEWKAPRHAAACHYAPKEAAAA 331 >ref|ZP_06897900.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gb|EFH10404.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 330 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/260 (72%), Positives = 215/260 (82%), Gaps = 28/260 (10%) Query: 1 MALLEVENLQTHFRTPDG-INRAVDGVSFQVAEGETLAIVGESGCGKSVTSMSLMRLIPE 59 MALLEVENLQTHFRTPDG +NRAVDG+SF V GET+AIVGESGCGKSVTSMS++RLIPE Sbjct: 1 MALLEVENLQTHFRTPDGGVNRAVDGLSFSVEAGETVAIVGESGCGKSVTSMSILRLIPE 60 Query: 60 PPGRIAGAVRFQGRDLLQLSEREMRGIRGNDISMIFQEPMSSLNPVLTVGRQIGETLRLH 119 PPG+IAG++RF G+DLL++S+REMR IRGN+ISMIFQEPM+SLNPVLT+G+QIGE LRLH Sbjct: 61 PPGKIAGSIRFNGKDLLKVSDREMRAIRGNEISMIFQEPMTSLNPVLTIGQQIGEALRLH 120 Query: 120 QGLDKQAAEARAVEMLNLVGIPEPARRVREYPHQLSGGMRQRVMIAMALACNPKLLIADE 179 QGL + AEA+AVEML LVGIP PA+RV+EYPHQLSGGMRQRVMIA+ALACNPKLLIADE Sbjct: 121 QGLSRSQAEAKAVEMLTLVGIPAPAKRVKEYPHQLSGGMRQRVMIAIALACNPKLLIADE 180 Query: 180 PTTALDVTIQAQILQLMLELKRSVGAX---------------------------EEAPVA 212 PTTALDVTIQAQIL LM +LKR+VGA EEA V Sbjct: 181 PTTALDVTIQAQILDLMRDLKRTVGAAIVLITHDLGVVAEVAERVIVMYAGRKVEEARVE 240 Query: 213 ALFRSPRHPYTQGLLGAVPR 232 LFR+P+HPYTQGLLGAVP+ Sbjct: 241 ELFRAPKHPYTQGLLGAVPK 260