BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0021.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769601.1| hypothetical protein blr2961 [Bradyrhizobium ja... 380 e-104 ref|YP_487191.1| hypothetical protein RPB_3585 [Rhodopseudomonas... 352 3e-95 ref|YP_569018.1| hypothetical protein RPD_1882 [Rhodopseudomonas... 340 1e-91 ref|YP_531567.1| hypothetical protein RPC_1689 [Rhodopseudomonas... 338 3e-91 ref|NP_947124.1| hypothetical protein RPA1779 [Rhodopseudomonas ... 330 1e-88 >ref|NP_769601.1| hypothetical protein blr2961 [Bradyrhizobium japonicum USDA 110] dbj|BAC48226.1| blr2961 [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/228 (80%), Positives = 198/228 (86%) Query: 1 VFDLTFNVDDKGVATPLALEIRQAVIAGWTGRDPVARDKHIAELEALGIARPATTPIYYR 60 +FDLTF VD + TPL L I Q VIAGWTGRDPVARDKHIAEL+ +GIA PA+TPIYYR Sbjct: 1 MFDLTFTVDAQDATTPLTLAIDQMVIAGWTGRDPVARDKHIAELQEMGIAPPASTPIYYR 60 Query: 61 CSARRLTFADTIEVCGEDSSGEVEFVLIGWQGRIFVGCGSDHTDRKVESYSVTVSKQMCD 120 SARRLT D IE CG DSSGEVEFVLIGWQGRIFVGCGSDHTDRKVE+Y+VTVSKQMCD Sbjct: 61 ASARRLTMEDRIECCGGDSSGEVEFVLIGWQGRIFVGCGSDHTDRKVEAYNVTVSKQMCD 120 Query: 121 KPMASELWELEDVIDQWDQLVLRSWATIGGQRVLYQEGTLDHMLPVKDLIARGFDQGALP 180 KP+AS LWELEDVI WD+++LRS+ATI G+RVLYQEGTLD MLPV DLIARGFD P Sbjct: 121 KPIASTLWELEDVIGHWDKMILRSYATIKGERVLYQEGTLDAMLPVADLIARGFDGTRFP 180 Query: 181 DGCAMFGGTFAAKGGIRPASRFEFELEDPVLKRKISHGYDVVTLPVRG 228 DGCAMFGGTFAAKGGIRPA RF+FELEDPVLKR I HGYDVVTLPVRG Sbjct: 181 DGCAMFGGTFAAKGGIRPADRFDFELEDPVLKRTIRHGYDVVTLPVRG 228 >ref|YP_487191.1| hypothetical protein RPB_3585 [Rhodopseudomonas palustris HaA2] gb|ABD08280.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 228 Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 168/228 (73%), Positives = 192/228 (84%) Query: 1 VFDLTFNVDDKGVATPLALEIRQAVIAGWTGRDPVARDKHIAELEALGIARPATTPIYYR 60 + DL+F +D +G TPL L I QAVIAGWTGRDPVARDKHI ELEALGIARPA+TPIYYR Sbjct: 1 MVDLSFILDAQGARTPLTLPISQAVIAGWTGRDPVARDKHIVELEALGIARPASTPIYYR 60 Query: 61 CSARRLTFADTIEVCGEDSSGEVEFVLIGWQGRIFVGCGSDHTDRKVESYSVTVSKQMCD 120 +A RLT A +IEV G DSSGEVEFVLIG GRI VG GSDHTDRKVE+Y VTVSKQMCD Sbjct: 61 VAASRLTMATSIEVSGGDSSGEVEFVLIGHAGRILVGVGSDHTDRKVEAYGVTVSKQMCD 120 Query: 121 KPMASELWELEDVIDQWDQLVLRSWATIGGQRVLYQEGTLDHMLPVKDLIARGFDQGALP 180 KP+A ELW+ +V WD++VLRS+ATIGG RVLYQEGTLDHMLP ++L++RGF G LP Sbjct: 121 KPIAPELWDFSEVEAHWDRIVLRSFATIGGVRVLYQEGTLDHMLPARELMSRGFGAGGLP 180 Query: 181 DGCAMFGGTFAAKGGIRPASRFEFELEDPVLKRKISHGYDVVTLPVRG 228 DGCA+FGGTFAAKGGIRPA+RFEFE++DPVL R I HGYDV+ LP+ G Sbjct: 181 DGCALFGGTFAAKGGIRPATRFEFEIDDPVLGRVIRHGYDVIELPILG 228 >ref|YP_569018.1| hypothetical protein RPD_1882 [Rhodopseudomonas palustris BisB5] gb|ABE39117.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 228 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 169/228 (74%), Positives = 189/228 (82%) Query: 1 VFDLTFNVDDKGVATPLALEIRQAVIAGWTGRDPVARDKHIAELEALGIARPATTPIYYR 60 + DLTF +D G + L L IRQAVIAGWTGRDPVARDKHIAELE LGIARPA+TPIYYR Sbjct: 1 MVDLTFTLDAVGQRSQLTLPIRQAVIAGWTGRDPVARDKHIAELEELGIARPASTPIYYR 60 Query: 61 CSARRLTFADTIEVCGEDSSGEVEFVLIGWQGRIFVGCGSDHTDRKVESYSVTVSKQMCD 120 +A RLT A +IEV G +SSGEVEFVLIG QGRI VG GSDHTDRKVE+Y VTVSKQMCD Sbjct: 61 VAAARLTTATSIEVSGSESSGEVEFVLIGAQGRILVGVGSDHTDRKVEAYGVTVSKQMCD 120 Query: 121 KPMASELWELEDVIDQWDQLVLRSWATIGGQRVLYQEGTLDHMLPVKDLIARGFDQGALP 180 KP+A ELW+ +V D WDQ+VLRS+ATIG +RV YQEG LD MLP ++LIARGF G LP Sbjct: 121 KPIAPELWDFAEVADHWDQIVLRSFATIGDERVPYQEGRLDGMLPARELIARGFGGGGLP 180 Query: 181 DGCAMFGGTFAAKGGIRPASRFEFELEDPVLKRKISHGYDVVTLPVRG 228 DGCAMFGGTFAA GGIRPA+RFEFE+EDPVL R I HGYDV+ LP+ G Sbjct: 181 DGCAMFGGTFAAMGGIRPATRFEFEIEDPVLNRTIRHGYDVIELPILG 228 >ref|YP_531567.1| hypothetical protein RPC_1689 [Rhodopseudomonas palustris BisB18] gb|ABD87248.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 228 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 160/228 (70%), Positives = 188/228 (82%) Query: 1 VFDLTFNVDDKGVATPLALEIRQAVIAGWTGRDPVARDKHIAELEALGIARPATTPIYYR 60 + ++ F + AT L L I QAVIAGWTGRDPVARDKHIAELEA+GI RPA+TPIYYR Sbjct: 1 MVEIAFTLTTNDGATALTLPIHQAVIAGWTGRDPVARDKHIAELEAIGITRPASTPIYYR 60 Query: 61 CSARRLTFADTIEVCGEDSSGEVEFVLIGWQGRIFVGCGSDHTDRKVESYSVTVSKQMCD 120 SARRLT A +IE G SSGEVEFVLIG QGR+ +G GSDHTDRKVE+Y++TVSKQMCD Sbjct: 61 VSARRLTTAGSIECSGRHSSGEVEFVLIGTQGRVLLGVGSDHTDRKVETYNITVSKQMCD 120 Query: 121 KPMASELWELEDVIDQWDQLVLRSWATIGGQRVLYQEGTLDHMLPVKDLIARGFDQGALP 180 KP+A +LW++ ++ D WD+++LRS+ATI GQRVLYQEGTLD MLP +LI+RGF + LP Sbjct: 121 KPIAPQLWDVAELADHWDKIILRSFATIDGQRVLYQEGTLDGMLPAAELISRGFGETGLP 180 Query: 181 DGCAMFGGTFAAKGGIRPASRFEFELEDPVLKRKISHGYDVVTLPVRG 228 DGCAMFGGTFAAKGGIRPASRF++E+EDPVL R I HGYDV LPV G Sbjct: 181 DGCAMFGGTFAAKGGIRPASRFDYEIEDPVLNRVIRHGYDVAVLPVVG 228 >ref|NP_947124.1| hypothetical protein RPA1779 [Rhodopseudomonas palustris CGA009] emb|CAE27220.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 228 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 168/228 (73%), Positives = 186/228 (81%) Query: 1 VFDLTFNVDDKGVATPLALEIRQAVIAGWTGRDPVARDKHIAELEALGIARPATTPIYYR 60 + DL F +D G T L L I AVIAGWTGRDPVARD HIAELEA+GIARPA+TPIYYR Sbjct: 1 MVDLAFTLDAAGSRTQLTLPITTAVIAGWTGRDPVARDHHIAELEAIGIARPASTPIYYR 60 Query: 61 CSARRLTFADTIEVCGEDSSGEVEFVLIGWQGRIFVGCGSDHTDRKVESYSVTVSKQMCD 120 +A RL A IEV G DSSGEVEFVLIG QGRI VG GSDHTDRKVE+Y VTVSKQMCD Sbjct: 61 VAAARLATAPAIEVSGGDSSGEVEFVLIGHQGRILVGVGSDHTDRKVEAYGVTVSKQMCD 120 Query: 121 KPMASELWELEDVIDQWDQLVLRSWATIGGQRVLYQEGTLDHMLPVKDLIARGFDQGALP 180 KP+A ELW+ DV WD++VLRS+ATIGG RVLYQEGTLD MLP ++LIARGF GALP Sbjct: 121 KPVAPELWDFGDVEPHWDRIVLRSFATIGGTRVLYQEGTLDAMLPARELIARGFGGGALP 180 Query: 181 DGCAMFGGTFAAKGGIRPASRFEFELEDPVLKRKISHGYDVVTLPVRG 228 DG A+FGGTFAAKGGIRPASRFEFE++DPVL R I HGYDV+ LP+ G Sbjct: 181 DGTALFGGTFAAKGGIRPASRFEFEIDDPVLGRIIRHGYDVLELPILG 228