BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0019.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204646.1| alkylated DNA repair protein AlkB [Bradyrhiz... 316 2e-84 ref|YP_531568.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustri... 312 2e-83 ref|YP_001238969.1| DNA-N1-methyladenine dioxygenase [Bradyrhizo... 310 6e-83 ref|NP_947068.1| alkylated DNA repair protein [Rhodopseudomonas ... 305 2e-81 ref|ZP_08629564.1| alkylated DNA repair protein AlkB [Bradyrhizo... 305 3e-81 >ref|YP_001204646.1| alkylated DNA repair protein AlkB [Bradyrhizobium sp. ORS 278] emb|CAL76409.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 278] Length = 219 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 149/216 (68%), Positives = 180/216 (83%), Gaps = 1/216 (0%) Query: 1 VAADLFETIGDARPSRETIADGAVLLRGFVRPFEAELIPALRVIVKQAPFRHLITPGGHR 60 + ADLF+ + DA P+RE +A GA+LLRGF RP E EL+ A+ +I QAPFR ++TPGGH+ Sbjct: 4 MTADLFDGL-DAGPARELLAPGALLLRGFARPLETELLAAIEMITAQAPFRRMVTPGGHQ 62 Query: 61 MSVAMTNCGSLGWVSDPGGYRYDPIDPDSGQPWPEMPEVLRRLAAGAAEEAGFNGFAPEA 120 MSVAMTNCG+LGWV+D GYRYD +DP+SGQPWP MP + R++A AA EAGF GFAP+A Sbjct: 63 MSVAMTNCGALGWVTDRSGYRYDAVDPESGQPWPAMPPLFRQIAENAAREAGFPGFAPDA 122 Query: 121 CLINRYVPGAKLSLHQDKDELDYRAPIVSISLGLPAIFLFGGLKRSDTPRRYRLEHGDVA 180 CLINRY PGAK+SLHQD+DE D APIVS+SLGLPA FLFGGL+R+D +RYRL HGDV Sbjct: 123 CLINRYEPGAKMSLHQDRDERDVGAPIVSVSLGLPATFLFGGLRRTDKTQRYRLVHGDVV 182 Query: 181 VWGGPSRLFYHGVAPLADGEHSVLGRQRINLTFRKV 216 VWGGP+RL +HGVAPLADGEH+ LGR+RINLTFR+ Sbjct: 183 VWGGPARLAFHGVAPLADGEHARLGRRRINLTFRRA 218 >ref|YP_531568.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris BisB18] gb|ABD87249.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris BisB18] Length = 216 Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 151/214 (70%), Positives = 173/214 (80%), Gaps = 1/214 (0%) Query: 4 DLFETIGDARPSRETIADGAVLLRGFVRPFEAELIPALRVIVKQAPFRHLITPGGHRMSV 63 DLFE I D RP+R+ IA+GA LLRGF E ELI ALR I+ +APFR +ITPGGH MSV Sbjct: 4 DLFEAI-DPRPARQPIAEGATLLRGFALADERELIAALRAILAEAPFRQMITPGGHTMSV 62 Query: 64 AMTNCGSLGWVSDPGGYRYDPIDPDSGQPWPEMPEVLRRLAAGAAEEAGFNGFAPEACLI 123 AM+NCG++GWV+D GYRYD IDPDSG+PWP MP VL LA AA EAGF F P+ACLI Sbjct: 63 AMSNCGAVGWVTDRKGYRYDAIDPDSGRPWPPMPAVLMDLAVRAASEAGFANFHPDACLI 122 Query: 124 NRYVPGAKLSLHQDKDELDYRAPIVSISLGLPAIFLFGGLKRSDTPRRYRLEHGDVAVWG 183 NRYVPGAK+SLHQDKDE D+ APIVS+SLGLPA+F+FGG KRSD P+R+ LEHGDV WG Sbjct: 123 NRYVPGAKMSLHQDKDEADFTAPIVSVSLGLPAVFMFGGAKRSDKPQRFALEHGDVVAWG 182 Query: 184 GPSRLFYHGVAPLADGEHSVLGRQRINLTFRKVR 217 G +RL +HGVA L DGEH +LGRQRINLTFRK R Sbjct: 183 GAARLAFHGVAALKDGEHPLLGRQRINLTFRKAR 216 >ref|YP_001238969.1| DNA-N1-methyladenine dioxygenase [Bradyrhizobium sp. BTAi1] gb|ABQ35063.1| DNA-N1-methyladenine dioxygenase [Bradyrhizobium sp. BTAi1] Length = 217 Score = 310 bits (795), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 147/217 (67%), Positives = 177/217 (81%) Query: 1 VAADLFETIGDARPSRETIADGAVLLRGFVRPFEAELIPALRVIVKQAPFRHLITPGGHR 60 +AADLF+ + A P+R+ +A GAVLLRGF R +AELI + I QAPFR ++TPGGH+ Sbjct: 1 MAADLFDGLESAGPARQQLAPGAVLLRGFARSQQAELIAVIEAIAAQAPFRRMMTPGGHQ 60 Query: 61 MSVAMTNCGSLGWVSDPGGYRYDPIDPDSGQPWPEMPEVLRRLAAGAAEEAGFNGFAPEA 120 MSVAMT+CGS GWV+D GYRYD +DP+SGQPWP +P + R LA AA EAGF FAP+A Sbjct: 61 MSVAMTSCGSCGWVTDRTGYRYDALDPESGQPWPAIPPLFRDLAEQAASEAGFADFAPDA 120 Query: 121 CLINRYVPGAKLSLHQDKDELDYRAPIVSISLGLPAIFLFGGLKRSDTPRRYRLEHGDVA 180 CLINRY PGAK+SLHQD+DE D APIVS+SLGLPA FLFGGLKR+D +RYRL HGDV Sbjct: 121 CLINRYEPGAKMSLHQDRDERDIGAPIVSVSLGLPATFLFGGLKRTDKTQRYRLVHGDVV 180 Query: 181 VWGGPSRLFYHGVAPLADGEHSVLGRQRINLTFRKVR 217 VWGGP+RL +HG+APLADGEH++LGR+RINLTFR+ R Sbjct: 181 VWGGPARLAFHGIAPLADGEHALLGRRRINLTFRRAR 217 >ref|NP_947068.1| alkylated DNA repair protein [Rhodopseudomonas palustris CGA009] emb|CAE27163.1| alkylated DNA repair protein [Rhodopseudomonas palustris CGA009] Length = 216 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 170/215 (79%), Gaps = 1/215 (0%) Query: 1 VAADLFETIGDARPSRETIADGAVLLRGFVRPFEAELIPALRVIVKQAPFRHLITPGGHR 60 + ADLF+ + DA P R+ IA GA LL GF R E EL+ A+ +V +APFRH++TPGGH Sbjct: 1 MTADLFDGLDDA-PRRQDIAPGAALLSGFARANERELLAAIDAVVARAPFRHMMTPGGHT 59 Query: 61 MSVAMTNCGSLGWVSDPGGYRYDPIDPDSGQPWPEMPEVLRRLAAGAAEEAGFNGFAPEA 120 MSVAMT+CGS+GWV+D GYRY P DPDS PWP+MP VLR LA AA + GF GF P+A Sbjct: 60 MSVAMTSCGSVGWVTDRRGYRYSPNDPDSATPWPKMPAVLRDLAQRAAADVGFAGFDPDA 119 Query: 121 CLINRYVPGAKLSLHQDKDELDYRAPIVSISLGLPAIFLFGGLKRSDTPRRYRLEHGDVA 180 CLINRYVPGAK++LHQDKDE D+ APIVS+SLGLPAIF FGG+ RSD PRRY L HGDV Sbjct: 120 CLINRYVPGAKMALHQDKDEADFSAPIVSVSLGLPAIFQFGGMARSDKPRRYELRHGDVL 179 Query: 181 VWGGPSRLFYHGVAPLADGEHSVLGRQRINLTFRK 215 VWGGPSRL YHGV L DGEH +LGRQRINLTFRK Sbjct: 180 VWGGPSRLVYHGVLTLKDGEHPLLGRQRINLTFRK 214 >ref|ZP_08629564.1| alkylated DNA repair protein AlkB [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08057.1| alkylated DNA repair protein AlkB [Bradyrhizobiaceae bacterium SG-6C] Length = 215 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 147/214 (68%), Positives = 167/214 (78%) Query: 4 DLFETIGDARPSRETIADGAVLLRGFVRPFEAELIPALRVIVKQAPFRHLITPGGHRMSV 63 DLF+ + ++ P + GA+LL GF RP EA LI A+ I+ +APFRHL+TPGGHRMSV Sbjct: 2 DLFDHLIESTPRDVQLVPGAMLLAGFARPLEAALIGAVTAIIARAPFRHLVTPGGHRMSV 61 Query: 64 AMTNCGSLGWVSDPGGYRYDPIDPDSGQPWPEMPEVLRRLAAGAAEEAGFNGFAPEACLI 123 AMTNCG +GWVSD GYRYD DPDSG PWP MPE LA AA++AGF F P+ACLI Sbjct: 62 AMTNCGRVGWVSDRTGYRYDTNDPDSGLPWPSMPETFADLALRAADKAGFADFRPDACLI 121 Query: 124 NRYVPGAKLSLHQDKDELDYRAPIVSISLGLPAIFLFGGLKRSDTPRRYRLEHGDVAVWG 183 NRY PGAKLSLHQDKDELD+ APIVS+SLGLPA FLFGGL R+D RYRL HGDV VWG Sbjct: 122 NRYEPGAKLSLHQDKDELDFNAPIVSVSLGLPATFLFGGLNRNDKTTRYRLAHGDVVVWG 181 Query: 184 GPSRLFYHGVAPLADGEHSVLGRQRINLTFRKVR 217 GP+RL YHGV PLADG+H +LG QRINLTFRK R Sbjct: 182 GPARLTYHGVMPLADGDHPLLGSQRINLTFRKTR 215