BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0018.p (404 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769604.1| hypothetical protein blr2964 [Bradyrhizobium ja... 598 e-169 ref|YP_485321.1| major facilitator transporter [Rhodopseudomonas... 517 e-144 ref|YP_780726.1| hypothetical protein RPE_1798 [Rhodopseudomonas... 447 e-123 ref|ZP_08630828.1| hypothetical protein CSIRO_3938 [Bradyrhizobi... 446 e-123 ref|YP_001020510.1| hypothetical protein Mpe_A1313 [Methylibium ... 230 3e-58 >ref|NP_769604.1| hypothetical protein blr2964 [Bradyrhizobium japonicum USDA 110] dbj|BAC48229.1| blr2964 [Bradyrhizobium japonicum USDA 110] Length = 414 Score = 598 bits (1541), Expect = e-169, Method: Compositional matrix adjust. Identities = 312/387 (80%), Positives = 346/387 (89%) Query: 12 TGVYLAVLQLVFTLGWTTYLIYLPKLCADVGIAPATVILILMMDQGIFTVTDTAMGMAAD 71 TG+YLAVLQLVFTLGWTTY++YLP+L ADVG+APA VI ILM+DQ IFT+ DTAMG+AAD Sbjct: 17 TGLYLAVLQLVFTLGWTTYVVYLPRLAADVGLAPAVVIFILMLDQAIFTIADTAMGIAAD 76 Query: 72 RISSLVGRLGLFVGILAAISCAAFIALPYVAGTGPGAKVWLIVLIVIWAVTSSALRAPPL 131 RI+ +VGRLGLFVG+LAAISCAAF+ALP+VAG G GA+V LI LIV+W+VTSSALRAPPL Sbjct: 77 RIAPVVGRLGLFVGVLAAISCAAFVALPFVAGIGAGAQVGLIALIVVWSVTSSALRAPPL 136 Query: 132 TLLGKYRAQPSVPFLAALAMLGYGIAGAVSPYLGVVLRNQDARLPFVLSGAVLLLTALAF 191 TLLGKYRA+P VPFLAALAMLGYG+AGAVSPYLGV+LR DARLPFV+SGAVLLLTAL Sbjct: 137 TLLGKYRARPQVPFLAALAMLGYGLAGAVSPYLGVMLRAHDARLPFVISGAVLLLTALGL 196 Query: 192 SGIERRIAAEAQPARLVPPAKRLGAVPMFLIGSMVLLSLGYQLHFNINSAPFYLRFAKAD 251 S IE +A + P AK LG VP+ I +MV L+LGYQLHF +NSAPFYLRFAK D Sbjct: 197 SRIEYDVARDTSPPTPAEAAKPLGLVPIAFIVAMVALALGYQLHFAMNSAPFYLRFAKPD 256 Query: 252 ELQWLMPVFWIGFNIAMFPASIVVKHRGGLIVMGAAGLLGAFAIVAAEIAGSLNVLIVAQ 311 ELQWLMPVFWIGFNIAMFPAS++VKHRGGLIVMGAAGLLGA AI AAE+AGSLN LI AQ Sbjct: 257 ELQWLMPVFWIGFNIAMFPASLIVKHRGGLIVMGAAGLLGAVAIAAAELAGSLNTLIAAQ 316 Query: 312 FMAGAAWGCMLMSAVSAALAIGETGAEGKVTGLVFSALALATFARMAAVAGGLQKMPDYA 371 F+AGAAWGCMLMSA+SAALAIG TGAEGKVTGLVFSALAL TFARMAAVAGGLQKMP+YA Sbjct: 317 FLAGAAWGCMLMSAISAALAIGSTGAEGKVTGLVFSALALGTFARMAAVAGGLQKMPEYA 376 Query: 372 PLVHWAPVACWSVAGAGLLVIAASRLQ 398 PL+HWAPVACWSVAGAGLLVIAA+RLQ Sbjct: 377 PLLHWAPVACWSVAGAGLLVIAAARLQ 403 >ref|YP_485321.1| major facilitator transporter [Rhodopseudomonas palustris HaA2] gb|ABD06410.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris HaA2] Length = 415 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 266/376 (70%), Positives = 318/376 (84%) Query: 9 VNLTGVYLAVLQLVFTLGWTTYLIYLPKLCADVGIAPATVILILMMDQGIFTVTDTAMGM 68 +N GVY+A+LQL+F L WT Y+++LPKL A+VGIAP VILILM+DQ IFT+ DTAMG+ Sbjct: 17 INRAGVYVALLQLLFALCWTIYVVFLPKLAAEVGIAPGAVILILMLDQAIFTIADTAMGI 76 Query: 69 AADRISSLVGRLGLFVGILAAISCAAFIALPYVAGTGPGAKVWLIVLIVIWAVTSSALRA 128 AAD++ +L R+GLFVGI A+SCAAF+ALP+V GP A+V I LIV+WA TSSALRA Sbjct: 77 AADKVGALTSRIGLFVGIATAVSCAAFVALPFVTSGGPSAQVAFIGLIVVWAATSSALRA 136 Query: 129 PPLTLLGKYRAQPSVPFLAALAMLGYGIAGAVSPYLGVVLRNQDARLPFVLSGAVLLLTA 188 PPLTL GKY A+PS+P+L+AL MLGYG+AGA SPYLGVV++N DARLPFV+S VLL+T Sbjct: 137 PPLTLFGKYGARPSLPWLSALTMLGYGLAGAASPYLGVVMKNIDARLPFVISSVVLLITT 196 Query: 189 LAFSGIERRIAAEAQPARLVPPAKRLGAVPMFLIGSMVLLSLGYQLHFNINSAPFYLRFA 248 LA S +ER ++ + P K LG +P I +MVLL+LGYQ+HF +NSAP +LRFA Sbjct: 197 LALSRVERGLSGAQPKPKPRDPGKALGPLPALFIAAMVLLALGYQMHFALNSAPMFLRFA 256 Query: 249 KADELQWLMPVFWIGFNIAMFPASIVVKHRGGLIVMGAAGLLGAFAIVAAEIAGSLNVLI 308 K D+LQWLMPVFWIGFNIA+FPAS+VVKHRGGLIVMGAAGLLGA A+ AE AG+LN+LI Sbjct: 257 KPDDLQWLMPVFWIGFNIALFPASVVVKHRGGLIVMGAAGLLGALAVAGAEYAGNLNMLI 316 Query: 309 VAQFMAGAAWGCMLMSAVSAALAIGETGAEGKVTGLVFSALALATFARMAAVAGGLQKMP 368 AQF+AGAAWGCMLMSAVSAALAIG+TGAEG++TGLVFSALALATFARMAAVAGGLQK+P Sbjct: 317 AAQFLAGAAWGCMLMSAVSAALAIGQTGAEGRLTGLVFSALALATFARMAAVAGGLQKLP 376 Query: 369 DYAPLVHWAPVACWSV 384 DYAPL++WAPVACWSV Sbjct: 377 DYAPLLYWAPVACWSV 392 >ref|YP_780726.1| hypothetical protein RPE_1798 [Rhodopseudomonas palustris BisA53] gb|ABJ05746.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 407 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 272/393 (69%), Positives = 321/393 (81%), Gaps = 1/393 (0%) Query: 8 AVNLTGVYLAVLQLVFTLGWTTYLIYLPKLCADVGIAPATVILILMMDQGIFTVTDTAMG 67 AV G++LAVLQL FTLGWTTY IYLP+L ADVGIAP+ VIL+LM+DQ IFTVTDTAMG Sbjct: 14 AVGRAGIHLAVLQLAFTLGWTTYAIYLPRLAADVGIAPSAVILLLMLDQAIFTVTDTAMG 73 Query: 68 MAADRISSLVGRLGLFVGILAAISCAAFIALPYVAGTGPGAKVWLIVLIVIWAVTSSALR 127 +AADR+S +VGRLG FVG+LAAISCAAF+ALP+VA GPGA+ +VL VIW +TSSALR Sbjct: 74 IAADRVSPVVGRLGRFVGLLAAISCAAFVALPFVAAAGPGAQAGFLVLTVIWVITSSALR 133 Query: 128 APPLTLLGKYRAQPSVPFLAALAMLGYGIAGAVSPYLGVVLRNQDARLPFVLSGAVLLLT 187 APPLTLLGKY A+P++P L+ALAMLGYG+AGAVSPYLG+ LR+QD RLPFV+S VLLL Sbjct: 134 APPLTLLGKYGARPALPLLSALAMLGYGLAGAVSPYLGIGLRDQDPRLPFVISSVVLLLV 193 Query: 188 ALAFSGIERRIAAEAQPARLVPPAKRLGAVPMF-LIGSMVLLSLGYQLHFNINSAPFYLR 246 ALA S +ER +A A A + I + V+L+LG+QLH +INS +R Sbjct: 194 ALALSRVERGLADRAAAVAHPAAAPKPPEAVPVAFIAATVVLALGFQLHLSINSPTMLMR 253 Query: 247 FAKADELQWLMPVFWIGFNIAMFPASIVVKHRGGLIVMGAAGLLGAFAIVAAEIAGSLNV 306 FA +LQWL+P+FWIGFNIAMFPA++VVK RGGL+VMGAA ++GA A++AAE A SL V Sbjct: 254 FAAETDLQWLLPIFWIGFNIAMFPATLVVKRRGGLVVMGAAAVVGAMAVLAAETATSLEV 313 Query: 307 LIVAQFMAGAAWGCMLMSAVSAALAIGETGAEGKVTGLVFSALALATFARMAAVAGGLQK 366 LI AQFMAGAAWGCMLMSAV+AALAIG TGAEGKV GLVFSALALATFARMAAVAGGL K Sbjct: 314 LIAAQFMAGAAWGCMLMSAVAAALAIGATGAEGKVVGLVFSALALATFARMAAVAGGLPK 373 Query: 367 MPDYAPLVHWAPVACWSVAGAGLLVIAASRLQR 399 PDYA L+HWAP ACW++AGAGLL +A +RL+R Sbjct: 374 QPDYAWLLHWAPAACWAIAGAGLLWLATARLRR 406 >ref|ZP_08630828.1| hypothetical protein CSIRO_3938 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06360.1| hypothetical protein CSIRO_3938 [Bradyrhizobiaceae bacterium SG-6C] Length = 426 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 238/399 (59%), Positives = 304/399 (76%), Gaps = 12/399 (3%) Query: 13 GVYLAVLQLVFTLGWTTYLIYLPKLCADVGIAPATVILILMMDQGIFTVTDTAMGMAADR 72 GVYLA+LQL FTLGWT Y+IYLP+L A VG+ P VI+IL++DQ IFT+TDT MG+AADR Sbjct: 26 GVYLALLQLFFTLGWTIYVIYLPQLAAKVGLPPGAVIVILLVDQAIFTITDTLMGIAADR 85 Query: 73 ISSLVGRLGLFVGILAAISCAAFIALPYVAGTGPGAKVWLIVLIVIWAVTSSALRAPPLT 132 ++ + GRL V L +SCAAF+ALP+VA GP AK+ LI L + W VTSSALRAPPL Sbjct: 86 MTPIAGRLSRVVIWLTVVSCAAFLALPFVADLGPNAKIALIALTLTWVVTSSALRAPPLA 145 Query: 133 LLGKYRAQPSVPFLAALAMLGYGIAGAVSPYLGVVLRNQDARLPFVLSGAVLLLTALAFS 192 LLGK+ A+PS+P L+ L MLGYGIAGAVSPYLGVVLRN D R+PFV+S VLL+TAL S Sbjct: 146 LLGKFAAKPSIPILSCLTMLGYGIAGAVSPYLGVVLRNHDPRIPFVISTVVLLVTALTMS 205 Query: 193 GIERRIAAEAQPARLVPPAKRLGAVP-------MFLIGSMVLLSLGYQLHFNINSAPFYL 245 IE+++ + +LV P ++ +P + I ++++L+LGYQLHF++NSAP +L Sbjct: 206 WIEQQL----REGKLVAPERKPLTIPKSWSTLALIFIAAVLVLALGYQLHFSVNSAPLFL 261 Query: 246 RFAKADELQWLMPVFWIGFNIAMFPASIVVKHRGGLIVMGAAGLLGAFAIVAAEIAGSLN 305 RFAK +LQWLMPV+WIGFNIAMFPAS + + GGL+V+G AGLLGA A+ E A LN Sbjct: 262 RFAKQPDLQWLMPVYWIGFNIAMFPASFITRRLGGLLVIGCAGLLGAGAVFGMENATGLN 321 Query: 306 VLIVAQFMAGAAWGCMLMSAVSAALAIGETGAEGKVTGLVFSALALATFARMAAVAGGLQ 365 +I QF+AGAAWGC+LMSAV+AA+A+ GAEGKV GL+FSALA+ATFAR+AAV+GGL Sbjct: 322 TMIAMQFLAGAAWGCILMSAVAAAIAV-SGGAEGKVLGLMFSALAVATFARIAAVSGGLT 380 Query: 366 KMPDYAPLVHWAPVACWSVAGAGLLVIAASRLQRGAKAA 404 + Y L+ W P+ CW++AGA LLVIA SRL++ +A Sbjct: 381 RNSAYDALLQWTPILCWALAGAALLVIALSRLRKWRDSA 419 >ref|YP_001020510.1| hypothetical protein Mpe_A1313 [Methylibium petroleiphilum PM1] gb|ABM94275.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 401 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 214/355 (60%), Gaps = 3/355 (0%) Query: 14 VYLAVLQLVFTLGWTTYLIYLPKLCADVGIAPATVILILMMDQGIFTVTDTAMGMAADRI 73 +Y+AV+Q +F WT Y IYLP+L G+ A IL+ DQ +F V D A G+ ADR+ Sbjct: 12 LYIAVIQFLFVTTWTVYAIYLPQLLETTGLPRAWAPWILLFDQLVFLVADIATGVFADRV 71 Query: 74 SSLVGRLGLFVGILAAISCAAFIALPYVAGTGPGAKVWLIVLIVIWAVTSSALRAPPLTL 133 +GR+G ++ A+SC AF+ LP A +G A WL+ L ++W ++SSALRAPP L Sbjct: 72 QRTLGRIGPWIVGATALSCLAFLLLPLAARSGSAASGWLLALTLVWTLSSSALRAPPWVL 131 Query: 134 LGKYRAQPSVPFLAALAMLGYGIAGAVSPYLGVVLRNQDARLPFVLSGAVLLLTALAFSG 193 LG++ A+P++P+L AL +LG GAV+PYLGV+L+ D RLPF LS LL T Sbjct: 132 LGRHAARPALPWLNALTLLGLAAGGAVAPYLGVLLKGVDPRLPFALSSLTLLATTAGLVQ 191 Query: 194 IER---RIAAEAQPARLVPPAKRLGAVPMFLIGSMVLLSLGYQLHFNINSAPFYLRFAKA 250 +ER R + PA GA + ++LL+ YQ +N+ P YLRFA Sbjct: 192 VERALARWRSAPLPAETTQIPHVGGAGHAAWMLGVLLLATAYQAQVFVNAVPHYLRFAAP 251 Query: 251 DELQWLMPVFWIGFNIAMFPASIVVKHRGGLIVMGAAGLLGAFAIVAAEIAGSLNVLIVA 310 L+WL+P+FW+GF +AM P + + + G L + A+ L GA A +A+ +A SL L+ A Sbjct: 252 SALEWLLPLFWVGFGVAMLPGAALCRAFGALPTLAASALCGAAAALASAVAASLPWLVAA 311 Query: 311 QFMAGAAWGCMLMSAVSAALAIGETGAEGKVTGLVFSALALATFARMAAVAGGLQ 365 Q AGAAWG ML++ ++A G +G EG V G +F+ LALAT R+ AV G+Q Sbjct: 312 QLGAGAAWGGMLLAMFASAAERGRSGREGLVLGTMFAMLALATLLRIGAVLAGVQ 366