BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0017.p (542 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204647.1| hypothetical protein BRADO2591 [Bradyrhizobi... 917 0.0 ref|NP_769605.1| hypothetical protein bll2965 [Bradyrhizobium ja... 909 0.0 ref|YP_001238970.1| hypothetical protein BBta_2937 [Bradyrhizobi... 908 0.0 ref|NP_949100.1| hypothetical protein RPA3763 [Rhodopseudomonas ... 874 0.0 ref|YP_001993255.1| hypothetical protein Rpal_4284 [Rhodopseudom... 873 0.0 >ref|YP_001204647.1| hypothetical protein BRADO2591 [Bradyrhizobium sp. ORS 278] emb|CAL76410.1| Putative acetolactate synthase large subunit [Bradyrhizobium sp. ORS 278] Length = 542 Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/540 (82%), Positives = 492/540 (91%) Query: 1 MTSTSGGEAIVNGLLAHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY 60 MT+ +GGEAIV+GL+AHGVDTVFGLPGAQ+YGLFDAFHQAQLKV+GARHEQACGYMAFGY Sbjct: 1 MTTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKVVGARHEQACGYMAFGY 60 Query: 61 ARSSGKPGVFSVVPGPGVLNASAALLTAFGCNEPVLCLTGQVPTQFLGKGRGHLHEMPDQ 120 AR+SG+PGVFSVVPGPGVLNA AALLTAFGCNEPVLCLTGQVPT +LG+GRGHLHEMPDQ Sbjct: 61 ARASGRPGVFSVVPGPGVLNAGAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQ 120 Query: 121 LATLRTFVKWADRIEYPDNAPALVSRAFQEMLSGRRGPASLEMPWDVFTQRTQVAAVKPF 180 LATLRTFVKWA+RIEYPD+AP LV+RAFQEMLSGRRGPA+LEMPWDVFTQ+ +A P Sbjct: 121 LATLRTFVKWAERIEYPDSAPTLVARAFQEMLSGRRGPAALEMPWDVFTQKAATSAANPL 180 Query: 181 DPLPAPQPDPDRIRAAADLIAGSKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG 240 + PQPDPDRI A LIA +KAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG Sbjct: 181 AQVTPPQPDPDRIAKATALIASAKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG 240 Query: 241 IVSNAHELGLTMASAYKLWPKTDLMIGIGTRLELPTMSRWPYQPAGLKCVRIDIDPVELR 300 IVSNAHELGLTMA+AYKLWP TDLMIGIGTR+ELPT RWP++P GLK +RIDIDP E+R Sbjct: 241 IVSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPAEMR 300 Query: 301 RWPADAGVIADARAGTADLVAAVRKVGYRKTSGRRTAIREATAATEQEIQRIQPQMAYLK 360 R DAG++ADA+AGTA L AAV K G RKTSGRR AIR+A+AAT QEIQ++QPQMAYL Sbjct: 301 RLIVDAGLVADAKAGTAALAAAVSKAGTRKTSGRRAAIRKASAATLQEIQKVQPQMAYLN 360 Query: 361 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTFVTSGYQGTLGSGFPTALGAKVANPN 420 +LREVLP +AIVTDELSQVGFASWYGFP+Y+PRTF+TSGYQGTLG+GFPTALGAKVA+P+ Sbjct: 361 VLREVLPHDAIVTDELSQVGFASWYGFPVYQPRTFITSGYQGTLGAGFPTALGAKVAHPD 420 Query: 421 KPVVAISGDGGFMFGVQELATAVQFKIGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV 480 KPVVAI+GDGGFMF VQELATAVQ+ IGVVTLVFNNN+YGNVRRDQRERFDGRVVASDLV Sbjct: 421 KPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLV 480 Query: 481 NPDFVKLAESFGVGAACVTSPDHFRPVLEKALADGGPYVISVEVPTDSEVSPWAFIHPAR 540 NPDFVKLAESFGV A+ VT+PD F+ LE ALA GGPY+I +EVP DSEVSPWAFIHPA+ Sbjct: 481 NPDFVKLAESFGVAASRVTAPDQFKAALETALAHGGPYLIDIEVPRDSEVSPWAFIHPAK 540 >ref|NP_769605.1| hypothetical protein bll2965 [Bradyrhizobium japonicum USDA 110] dbj|BAC48230.1| bll2965 [Bradyrhizobium japonicum USDA 110] Length = 541 Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/540 (85%), Positives = 496/540 (91%) Query: 1 MTSTSGGEAIVNGLLAHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY 60 MT+ +GGEAIV+GL+AHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY Sbjct: 1 MTTLTGGEAIVSGLVAHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY 60 Query: 61 ARSSGKPGVFSVVPGPGVLNASAALLTAFGCNEPVLCLTGQVPTQFLGKGRGHLHEMPDQ 120 ARSSG+PGVFSVVPGPGVLNASAALLTA+GCNEPVLC+TGQVPTQFLGKGRGHLHEMPDQ Sbjct: 61 ARSSGRPGVFSVVPGPGVLNASAALLTAYGCNEPVLCVTGQVPTQFLGKGRGHLHEMPDQ 120 Query: 121 LATLRTFVKWADRIEYPDNAPALVSRAFQEMLSGRRGPASLEMPWDVFTQRTQVAAVKPF 180 LATLRT+VKWADRIE P NAP V+RAFQEM SGRRGPAS+EMPWD+FTQR AA + Sbjct: 121 LATLRTYVKWADRIEAPGNAPTTVARAFQEMASGRRGPASVEMPWDIFTQRADTAAAQVL 180 Query: 181 DPLPAPQPDPDRIRAAADLIAGSKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG 240 +PLPAP PDPD I+ AA LI SKAPMIFVGSGAI+A EEILELAEMIDAPVVAFRSGRG Sbjct: 181 EPLPAPLPDPDMIKQAAALIKASKAPMIFVGSGAIDAGEEILELAEMIDAPVVAFRSGRG 240 Query: 241 IVSNAHELGLTMASAYKLWPKTDLMIGIGTRLELPTMSRWPYQPAGLKCVRIDIDPVELR 300 IVSNAHELGLTMA+AYKLWP TDLMIGIG+RLELPTMSRWPY+P GLK +RIDIDPVE+R Sbjct: 241 IVSNAHELGLTMAAAYKLWPNTDLMIGIGSRLELPTMSRWPYRPDGLKSIRIDIDPVEMR 300 Query: 301 RWPADAGVIADARAGTADLVAAVRKVGYRKTSGRRTAIREATAATEQEIQRIQPQMAYLK 360 R+ +D ++ADA+A TADL AAV K GY KT+GRR AIRE TAA +QEIQRIQPQMAYL Sbjct: 301 RFISDTAIVADAKAATADLAAAVSKAGYSKTTGRRGAIREVTAAAQQEIQRIQPQMAYLN 360 Query: 361 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTFVTSGYQGTLGSGFPTALGAKVANPN 420 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTF+TSGYQGTLGSGFPTALGAKVANP+ Sbjct: 361 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTFITSGYQGTLGSGFPTALGAKVANPD 420 Query: 421 KPVVAISGDGGFMFGVQELATAVQFKIGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV 480 KPVVAI+GDGGFMFGVQELATAVQF IGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV Sbjct: 421 KPVVAITGDGGFMFGVQELATAVQFNIGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV 480 Query: 481 NPDFVKLAESFGVGAACVTSPDHFRPVLEKALADGGPYVISVEVPTDSEVSPWAFIHPAR 540 NPDFVKLAESFGV AA VT+PD F+ +EKAL+ GGPY+ISVEV DSEVSPWAFIHP + Sbjct: 481 NPDFVKLAESFGVAAARVTAPDQFKAAMEKALSHGGPYLISVEVTRDSEVSPWAFIHPPK 540 >ref|YP_001238970.1| hypothetical protein BBta_2937 [Bradyrhizobium sp. BTAi1] gb|ABQ35064.1| acetolactate synthase, large subunit [Bradyrhizobium sp. BTAi1] Length = 543 Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/542 (82%), Positives = 497/542 (91%) Query: 1 MTSTSGGEAIVNGLLAHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY 60 MT+ +GGEAIV+GL+AHGVDTVFGLPGAQ+YGLFDAFHQAQLK +GARHEQACGYMAFGY Sbjct: 1 MTTMTGGEAIVSGLVAHGVDTVFGLPGAQVYGLFDAFHQAQLKTVGARHEQACGYMAFGY 60 Query: 61 ARSSGKPGVFSVVPGPGVLNASAALLTAFGCNEPVLCLTGQVPTQFLGKGRGHLHEMPDQ 120 AR+SGKPGVFSVVPGPGVLNA AALLTAFGCNEPVLCLTGQVPT +LG+GRGHLHEMPDQ Sbjct: 61 ARASGKPGVFSVVPGPGVLNAGAALLTAFGCNEPVLCLTGQVPTDYLGRGRGHLHEMPDQ 120 Query: 121 LATLRTFVKWADRIEYPDNAPALVSRAFQEMLSGRRGPASLEMPWDVFTQRTQVAAVKPF 180 LATLRTFVKWA+RIEYPD+AP LVSRAFQEMLSGRRGPA+LEMPWDVFTQ+ + +A KP Sbjct: 121 LATLRTFVKWAERIEYPDSAPTLVSRAFQEMLSGRRGPAALEMPWDVFTQKAETSAAKPL 180 Query: 181 DPLPAPQPDPDRIRAAADLIAGSKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG 240 P PQPDPDRI AA LIAG+KAPMIFVG+GAIEAR+EILELAEMIDAPVVAFRSGRG Sbjct: 181 GPFTPPQPDPDRIAKAAALIAGAKAPMIFVGAGAIEARDEILELAEMIDAPVVAFRSGRG 240 Query: 241 IVSNAHELGLTMASAYKLWPKTDLMIGIGTRLELPTMSRWPYQPAGLKCVRIDIDPVELR 300 I+SNAHELGLTMA+AYKLWP TDLMIGIGTR+ELPT RWP++P GLK +RIDIDPVE+R Sbjct: 241 ILSNAHELGLTMAAAYKLWPTTDLMIGIGTRMELPTTFRWPFKPDGLKSIRIDIDPVEMR 300 Query: 301 RWPADAGVIADARAGTADLVAAVRKVGYRKTSGRRTAIREATAATEQEIQRIQPQMAYLK 360 R DAG++ADA+AGTA L AAV K GYRKT+GRR IREA+AA+ QEIQR+QPQMAYL Sbjct: 301 RLIVDAGIVADAKAGTAALAAAVSKAGYRKTAGRRATIREASAASLQEIQRVQPQMAYLN 360 Query: 361 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTFVTSGYQGTLGSGFPTALGAKVANPN 420 +LR VLP +AIVTDELSQVGFASWYGFP+YEPRTF+TSGYQGTLG+GFPTALGAKVA+P+ Sbjct: 361 VLRAVLPHDAIVTDELSQVGFASWYGFPVYEPRTFITSGYQGTLGAGFPTALGAKVAHPD 420 Query: 421 KPVVAISGDGGFMFGVQELATAVQFKIGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV 480 +PVVAI+GDGGFMF VQELATAVQ+ IGVVTLVFNNN+YGNVRRDQRERFDGRVVASDLV Sbjct: 421 RPVVAITGDGGFMFAVQELATAVQYNIGVVTLVFNNNSYGNVRRDQRERFDGRVVASDLV 480 Query: 481 NPDFVKLAESFGVGAACVTSPDHFRPVLEKALADGGPYVISVEVPTDSEVSPWAFIHPAR 540 NPDFVKLAESFGV A+ VT+PD FR LEKALA GGPY+I +EVP DSE+SPWAFIHPA+ Sbjct: 481 NPDFVKLAESFGVAASKVTAPDQFRSALEKALAHGGPYLIDIEVPRDSEISPWAFIHPAK 540 Query: 541 NS 542 S Sbjct: 541 PS 542 >ref|NP_949100.1| hypothetical protein RPA3763 [Rhodopseudomonas palustris CGA009] emb|CAE29204.1| putative acetolactate synthase large subunit [Rhodopseudomonas palustris CGA009] Length = 541 Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/540 (79%), Positives = 480/540 (88%) Query: 1 MTSTSGGEAIVNGLLAHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY 60 M+ +GGEAIV GL+AHGVDTVFGLPGAQIYGLFD F +AQLKVIGARHEQACGYMAFGY Sbjct: 1 MSIMTGGEAIVQGLVAHGVDTVFGLPGAQIYGLFDGFAKAQLKVIGARHEQACGYMAFGY 60 Query: 61 ARSSGKPGVFSVVPGPGVLNASAALLTAFGCNEPVLCLTGQVPTQFLGKGRGHLHEMPDQ 120 AR+SGKPGVFSVVPGPGVLNASAALLTAFGCNEPV+CLTGQVP+ +LGKGRGHLHEMPDQ Sbjct: 61 ARASGKPGVFSVVPGPGVLNASAALLTAFGCNEPVMCLTGQVPSAYLGKGRGHLHEMPDQ 120 Query: 121 LATLRTFVKWADRIEYPDNAPALVSRAFQEMLSGRRGPASLEMPWDVFTQRTQVAAVKPF 180 LATLR+F+KWA+RIEYP NAPALV+RAFQEM+SGRRGP +LEMPW+VFTQ + + Sbjct: 121 LATLRSFIKWAERIEYPGNAPALVARAFQEMMSGRRGPVALEMPWEVFTQTAETGIAQKL 180 Query: 181 DPLPAPQPDPDRIRAAADLIAGSKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG 240 DP+ P PDPDR+ AAA LIA SK PMIFVGSGA+EA +EILELAEMIDAPVVAFRSGRG Sbjct: 181 DPIAPPAPDPDRVAAAAKLIAQSKTPMIFVGSGALEAGDEILELAEMIDAPVVAFRSGRG 240 Query: 241 IVSNAHELGLTMASAYKLWPKTDLMIGIGTRLELPTMSRWPYQPAGLKCVRIDIDPVELR 300 IVSN HELGLT A+AY+LWP+TDL+IGIGTR+ELPT RWP++P GLK VRIDIDP E+R Sbjct: 241 IVSNRHELGLTFAAAYQLWPQTDLIIGIGTRMELPTTFRWPFRPEGLKSVRIDIDPAEMR 300 Query: 301 RWPADAGVIADARAGTADLVAAVRKVGYRKTSGRRTAIREATAATEQEIQRIQPQMAYLK 360 R+ DA +++D++AG L AV K GY KT GRR AIR ATA T+Q+IQ IQPQM+YLK Sbjct: 301 RFAPDAAIVSDSKAGARALADAVSKAGYSKTKGRREAIRAATAKTQQDIQAIQPQMSYLK 360 Query: 361 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTFVTSGYQGTLGSGFPTALGAKVANPN 420 ILREVLP +AIVTDELSQVGFASWYGFPIY+PRTF+TSGYQGTLGSGFPTALGAKVA P+ Sbjct: 361 ILREVLPDDAIVTDELSQVGFASWYGFPIYQPRTFLTSGYQGTLGSGFPTALGAKVACPD 420 Query: 421 KPVVAISGDGGFMFGVQELATAVQFKIGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV 480 KPVVAI+GDGGFMFGVQELATAVQ+ IGVVTLVF+N+AYGNVRRDQ FDGRVVASDLV Sbjct: 421 KPVVAITGDGGFMFGVQELATAVQYNIGVVTLVFDNSAYGNVRRDQVNLFDGRVVASDLV 480 Query: 481 NPDFVKLAESFGVGAACVTSPDHFRPVLEKALADGGPYVISVEVPTDSEVSPWAFIHPAR 540 NPDFVKLAESFGVGAA VTSPDHFRP LEKALA GGP +I+++VP DSE SPW FIHPA+ Sbjct: 481 NPDFVKLAESFGVGAARVTSPDHFRPALEKALAAGGPQLIAIDVPRDSEASPWPFIHPAK 540 >ref|YP_001993255.1| hypothetical protein Rpal_4284 [Rhodopseudomonas palustris TIE-1] gb|ACF02780.1| thiamine pyrophosphate domain protein TPP-binding [Rhodopseudomonas palustris TIE-1] Length = 541 Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/540 (79%), Positives = 478/540 (88%) Query: 1 MTSTSGGEAIVNGLLAHGVDTVFGLPGAQIYGLFDAFHQAQLKVIGARHEQACGYMAFGY 60 M+ +GGEAIV GL+AHGVDTVFGLPGAQIYGLFD F +AQLKVIGARHEQACGYMAFGY Sbjct: 1 MSIMTGGEAIVQGLVAHGVDTVFGLPGAQIYGLFDGFAKAQLKVIGARHEQACGYMAFGY 60 Query: 61 ARSSGKPGVFSVVPGPGVLNASAALLTAFGCNEPVLCLTGQVPTQFLGKGRGHLHEMPDQ 120 AR+SGKPGVFSVVPGPGVLNA AALLTAFGCNEPV+CLTGQVP+ +LGKGRGHLHEMPDQ Sbjct: 61 ARASGKPGVFSVVPGPGVLNAGAALLTAFGCNEPVMCLTGQVPSAYLGKGRGHLHEMPDQ 120 Query: 121 LATLRTFVKWADRIEYPDNAPALVSRAFQEMLSGRRGPASLEMPWDVFTQRTQVAAVKPF 180 LATLR+F+KWA+RIEYP NAPALV+RAFQEM+SGRRGP +LEMPW+VFTQ + A + Sbjct: 121 LATLRSFIKWAERIEYPGNAPALVARAFQEMMSGRRGPVALEMPWEVFTQTAETGAAQKL 180 Query: 181 DPLPAPQPDPDRIRAAADLIAGSKAPMIFVGSGAIEAREEILELAEMIDAPVVAFRSGRG 240 DP+ P PDPDRI AAA LI SK PMIFVGSGA+EA +EILELAEMIDAPVVAFRSGRG Sbjct: 181 DPIAPPAPDPDRIAAAAKLITASKTPMIFVGSGALEAGDEILELAEMIDAPVVAFRSGRG 240 Query: 241 IVSNAHELGLTMASAYKLWPKTDLMIGIGTRLELPTMSRWPYQPAGLKCVRIDIDPVELR 300 IVSN HELGLT A+AY+LWP TDL+IGIGTR+ELPT RWP++P GLK VRIDIDP E+R Sbjct: 241 IVSNRHELGLTFAAAYQLWPHTDLIIGIGTRMELPTTFRWPFRPEGLKSVRIDIDPAEMR 300 Query: 301 RWPADAGVIADARAGTADLVAAVRKVGYRKTSGRRTAIREATAATEQEIQRIQPQMAYLK 360 R+ DA +++D++AG L AV K GY KT GRR AIR ATA T+Q+IQ IQPQM+YLK Sbjct: 301 RFAPDAAIVSDSKAGARALADAVSKAGYSKTKGRREAIRAATAKTQQDIQAIQPQMSYLK 360 Query: 361 ILREVLPANAIVTDELSQVGFASWYGFPIYEPRTFVTSGYQGTLGSGFPTALGAKVANPN 420 ILREVLP +AIVTDELSQVGFASWYGFPIY+PRTF+TSGYQGTLGSGFPTALGAKVA P+ Sbjct: 361 ILREVLPDDAIVTDELSQVGFASWYGFPIYQPRTFLTSGYQGTLGSGFPTALGAKVACPD 420 Query: 421 KPVVAISGDGGFMFGVQELATAVQFKIGVVTLVFNNNAYGNVRRDQRERFDGRVVASDLV 480 KPVVAI+GDGGFMFGVQELATAVQ+ IGVVTLVF+N+AYGNVRRDQ FDGRVVASDLV Sbjct: 421 KPVVAITGDGGFMFGVQELATAVQYNIGVVTLVFDNSAYGNVRRDQVNLFDGRVVASDLV 480 Query: 481 NPDFVKLAESFGVGAACVTSPDHFRPVLEKALADGGPYVISVEVPTDSEVSPWAFIHPAR 540 NPDFVKLAESFGVGAA VTSPDHFRP LEKALA GGP +I+++VP DSE SPW FIHPA+ Sbjct: 481 NPDFVKLAESFGVGAARVTSPDHFRPALEKALAAGGPQLIAIDVPRDSEASPWPFIHPAK 540