BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0010.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001416507.1| GntR family transcriptional regulator [Xanth... 293 2e-77 ref|YP_918429.1| GntR family transcriptional regulator [Paracocc... 276 4e-72 ref|YP_676501.1| GntR family transcriptional regulator [Mesorhiz... 251 9e-65 ref|YP_522306.1| GntR family transcriptional regulator [Rhodofer... 244 2e-62 ref|YP_727200.1| GntR family transcriptional regulator [Ralstoni... 238 1e-60 >ref|YP_001416507.1| GntR family transcriptional regulator [Xanthobacter autotrophicus Py2] gb|ABS66850.1| transcriptional regulator, GntR family [Xanthobacter autotrophicus Py2] Length = 338 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 158/312 (50%), Positives = 204/312 (65%), Gaps = 4/312 (1%) Query: 8 MSIPRAKSQTRRKQPAYALIKSALAKHIRAGDVPPGTVLSESAIATLFGSSRSPVRQAFE 67 +S R + + PAYA+I L + I AG +P G VL E +A LFGSSRSPV+QA Sbjct: 8 LSAARTAAPVVDRTPAYAVIAGRLRRSIAAGVLPEGIVLLEGPLAALFGSSRSPVKQALA 67 Query: 68 QLEHIGLVRRFDGRGVIAGKRKVDPRRVPITPEMFGLTDGPVDAVRSDAWDTLYYKLERE 127 +LE G+V RFDGRG++ G R PRR+P+T EM D V+A + AW LYY ERE Sbjct: 68 ELEEEGVVSRFDGRGLMVG-RAAAPRRLPVTAEMLKSGDEAVEARKGFAWQALYYDFERE 126 Query: 128 IIYRSLFGRFRVSELALARHFRVGRTVARNLLLRAQAIGILEKGAKAHWYVVPLDEDRLR 187 II S+FGRFRV+ELA+ARHF VGRTVAR+LL+ A+ +GI+ KG K+HW+ VPLDE R R Sbjct: 127 IILSSVFGRFRVNELAIARHFDVGRTVARDLLIHAREVGIVSKGEKSHWWTVPLDEARFR 186 Query: 188 DIFEVRATLEPLLLKSATATIPAALLDRMAERLREGIQHRDRVGVGELDEIEGDLHIRCL 247 D++E+R LEP+ L SA IP LD + RLR+ + +V +LD +E DLHI C+ Sbjct: 187 DLYELRILLEPVALDSAIGQIPTPQLDAIERRLRDAMDSYPKVESADLDVLENDLHIDCI 246 Query: 248 GYGANREMIEALKRTHCAFVIGKHIQVALTAPQ--IDSFMDEHLVIIEALRTRDGDAAAA 305 G+G N E++EALKRT C V GKHIQ+ L P +D FM EHL II+A+R AA Sbjct: 247 GHGRNPEIMEALKRTRCILVSGKHIQMELK-PHGLVDPFMGEHLDIIKAVRKGQHAAARR 305 Query: 306 TLRRHIEWSHSK 317 L H++ S K Sbjct: 306 ALVAHLQASSDK 317 >ref|YP_918429.1| GntR family transcriptional regulator [Paracoccus denitrificans PD1222] gb|ABL72733.1| transcriptional regulator, GntR family [Paracoccus denitrificans PD1222] Length = 343 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 155/317 (48%), Positives = 205/317 (64%), Gaps = 2/317 (0%) Query: 22 PAYALIKSALAKHIRAGDVPPGTVLSESAIATLFGSSRSPVRQAFEQLEHIGLVRRFDGR 81 PAYA I++ + K I AG +P GTVL E +A LFGSSRSPV++A LE GL+ RFDGR Sbjct: 25 PAYATIEARIRKSIEAGALPDGTVLLEGPLAALFGSSRSPVKRALSALEEDGLLSRFDGR 84 Query: 82 GVIAGKRKVDPRRVPITPEMFGLTDGPVDAVRSDAWDTLYYKLEREIIYRSLFGRFRVSE 141 G++ G + + PRRV I P+M L D +S AW YY EREII RS+FGR RV+E Sbjct: 85 GLLVGNKGI-PRRVKILPDMLLLDDDEGLNAKSFAWQPHYYDFEREIILRSVFGRARVNE 143 Query: 142 LALARHFRVGRTVARNLLLRAQAIGILEKGAKAHWYVVPLDEDRLRDIFEVRATLEPLLL 201 LALARH V RTVA +LL+ A+ +GI+ K + W++VPLDE R +++E+R LEP+ + Sbjct: 144 LALARHLDVSRTVAHDLLIHAREVGIVYKDDGSRWWIVPLDEARFDNLYELRILLEPVAM 203 Query: 202 KSATATIPAALLDRMAERLREGIQHRDRVGVGELDEIEGDLHIRCLGYGANREMIEALKR 261 SA IP LD + RL + V +LD +E DLHI C+G+G N E+IEALKR Sbjct: 204 TSAIGRIPDERLDEIEARLHRVQERFPAVTGADLDLLESDLHIDCIGHGCNPEIIEALKR 263 Query: 262 THCAFVIGKHIQVAL-TAPQIDSFMDEHLVIIEALRTRDGDAAAATLRRHIEWSHSKVAG 320 +HC V GKHIQ+AL + ++D FMDEHL I+ ALR +D A TL RH+E S K Sbjct: 264 SHCILVAGKHIQLALGSDARVDPFMDEHLEIVAALRAQDPIAVRETLVRHLELSAEKAVH 323 Query: 321 WIAEFRAINVISRVPYM 337 +A FR ++ +PY+ Sbjct: 324 RLAAFRGSQRVAELPYI 340 >ref|YP_676501.1| GntR family transcriptional regulator [Mesorhizobium sp. BNC1] gb|ABG65336.1| transcriptional regulator, GntR family [Chelativorans sp. BNC1] Length = 323 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 140/317 (44%), Positives = 193/317 (60%), Gaps = 6/317 (1%) Query: 26 LIKSALAKHIRAG----DVPPGTVLSESAIATLFGSSRSPVRQAFEQLEHIGLVRRFDGR 81 L K A+A+ +R +P G VL E IATLF +SR+PV+QA LE GLVRRF GR Sbjct: 6 LAKEAIAETLRTALIEKTLPEGAVLLEGPIATLFNASRTPVKQALATLESEGLVRRFKGR 65 Query: 82 GVIAGKRKVDPRRVPITPEMFGLTDGPVDAVRSDAWDTLYYKLEREIIYRSLFGRFRVSE 141 G++AGK +P R+ +TPEM L + ++ AW++ YY E+ +I R+++G RV+E Sbjct: 66 GLLAGKEG-EPLRIKVTPEMLKLNPEGHEYPKTFAWESFYYDFEKTVILRAVYGTARVNE 124 Query: 142 LALARHFRVGRTVARNLLLRAQAIGILEKGAKAHWYVVPLDEDRLRDIFEVRATLEPLLL 201 LAL+RH+ V RTVA ++L R GI+ + K+ W+V PLDE R RD++EVRA LEP L Sbjct: 125 LALSRHYGVSRTVAGDILNRGAEKGIVSRDEKSRWFVNPLDERRFRDLYEVRALLEPAAL 184 Query: 202 KSATATIPAALLDRMAERLREGIQHRDRVGVGELDEIEGDLHIRCLGYGANREMIEALKR 261 ++A P + + RL +H V ELDE+E DLHI L + N E+IE L+R Sbjct: 185 QTAIDHAPVEFVQGLRSRLLRTSEHFPDVQGAELDELEKDLHIDLLQWTGNIEIIEGLRR 244 Query: 262 THCAFVIGKHIQVALTA-PQIDSFMDEHLVIIEALRTRDGDAAAATLRRHIEWSHSKVAG 320 THC V GKHIQ A+ ID+FM EHL I++A+ +D A A L H+ S K A Sbjct: 245 THCVLVAGKHIQRAIRGMTGIDAFMGEHLEIVDAVLEKDHQLAKARLSAHLLASSRKAAE 304 Query: 321 WIAEFRAINVISRVPYM 337 I FR++N + V Y+ Sbjct: 305 RIHAFRSVNQMESVSYL 321 >ref|YP_522306.1| GntR family transcriptional regulator [Rhodoferax ferrireducens T118] gb|ABD68775.1| transcriptional regulator, GntR family [Rhodoferax ferrireducens T118] Length = 341 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 125/323 (38%), Positives = 198/323 (61%), Gaps = 1/323 (0%) Query: 17 TRRKQPAYALIKSALAKHIRAGDVPPGTVLSESAIATLFGSSRSPVRQAFEQLEHIGLVR 76 T R P YALI L K I+A + PGTVL E +A + GS+R+PVRQA + LE GLV Sbjct: 19 TTRAAPIYALITDRLRKAIQAALIAPGTVLLEGHVAEILGSTRTPVRQALQDLESEGLVS 78 Query: 77 RFDGRGVIAGKRKVDPRRVPITPEMFGLTDGPVDAVRSDAWDTLYYKLEREIIYRSLFGR 136 RF+GRGVI G + +PRRV +T M G+ ++ W+++Y ++ER+++ S+FG Sbjct: 79 RFEGRGVIVGGAETEPRRVTLTAVMLGMNTSDEPVRKTHGWESIYEEVERDVVNLSVFGN 138 Query: 137 FRVSELALARHFRVGRTVARNLLLRAQAIGILEKGAKAHWYVVPLDEDRLRDIFEVRATL 196 +RVSEL +AR+F+VGR VA ++L+R + +G++EK ++ W V PLD +R++ ++E+R L Sbjct: 139 YRVSELEMARNFKVGRMVAHDVLMRLERVGLVEKDERSRWVVRPLDAERIKHLYELRWLL 198 Query: 197 EPLLLKSATATIPAALLDRMAERLREGIQHRDRVGVGELDEIEGDLHIRCLGYGANREMI 256 EP L+SA ++ + M LR ++ + ELD++E D H++ L +N E++ Sbjct: 199 EPAALRSAIDSVTSDETAAMMSELRAAMRAYPAISRTELDKLEDDFHVKLLSKCSNEELL 258 Query: 257 EALKRTHCAFVIGKHI-QVALTAPQIDSFMDEHLVIIEALRTRDGDAAAATLRRHIEWSH 315 + L RT C + KH+ V+ P+ D FM EHL +++A+ + A LR+H+E S Sbjct: 259 QGLTRTRCLLTLSKHVLGVSAPMPKRDPFMSEHLAVLKAVAGGNITNAQDLLRKHLEGSC 318 Query: 316 SKVAGWIAEFRAINVISRVPYMA 338 SKV+ R I ++PY++ Sbjct: 319 SKVSLRALHVRNNLPIPKLPYIS 341 >ref|YP_727200.1| GntR family transcriptional regulator [Ralstonia eutropha H16] emb|CAJ93832.1| transcriptional regulator, GntR-family [Ralstonia eutropha H16] Length = 348 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 128/323 (39%), Positives = 195/323 (60%), Gaps = 4/323 (1%) Query: 16 QTRRKQPAYALIKSALAKHIRAGDVPPGTVLSESAIATLFGSSRSPVRQAFEQLEHIGLV 75 + R P YALI L K + G + GTVL E +A + ++RSPVRQA +LE GLV Sbjct: 25 EASRHAPIYALIHQVLRKAMLDGTLEQGTVLLEGPVAEILRATRSPVRQALRELEAEGLV 84 Query: 76 RRFDGRGVIAGKRKVDPRRVPITPEMFGLTDGPVDAVRSDAWDTLYYKLEREIIYRSLFG 135 RFDGRG +AG +PRRVP+ M G+ P A ++ W+ +Y ++ER +++ S+FG Sbjct: 85 SRFDGRGYVAGPAGTEPRRVPLDAAMLGVDSAPDVARKTLGWEVIYDEVERNLVHLSVFG 144 Query: 136 RFRVSELALARHFRVGRTVARNLLLRAQAIGILEKGAKAHWYVVPLDEDRLRDIFEVRAT 195 R+RV+E+ LAR+F VGRTV R++LLR +++GILEK + W ++PLD R+ D++E+R+ Sbjct: 145 RYRVNEVELARYFNVGRTVVRDVLLRLESLGILEKDERQRWVIIPLDAQRIHDLYELRSL 204 Query: 196 LEPLLLKSATATIPAALLDRMAERLREGIQHRDRVGVGELDEIEGDLHIRCLGYGANREM 255 +EP L+ A AA L M E L + + +V +D++E DLH+R L N+E+ Sbjct: 205 VEPAALRGAIVHADAAELAAMMEDLHKVQRVYPKVSRTAMDKLEHDLHVRLLSLCPNKEL 264 Query: 256 IEALKRTHCAFVIGKHI-QVALTAPQIDSFMDEHLVIIEALRTRDGDAAAATLRRHIEWS 314 + +L+RT C + KH+ + PQ D F+ EH+ +++A AA LR H+E S Sbjct: 265 LGSLQRTRCILTLSKHVLGASAPMPQEDPFLSEHMAVLQAAAAGAPRKAAELLREHLELS 324 Query: 315 HSKV---AGWIAEFRAINVISRV 334 +KV AG + E A+ +S + Sbjct: 325 CAKVTQRAGLVRETFALPTVSYI 347