BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0066.0004.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204654.1| putative aldolase [Bradyrhizobium sp. ORS 27... 498 e-139 ref|YP_001238977.1| putative aldolase [Bradyrhizobium sp. BTAi1]... 498 e-139 ref|NP_769613.1| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase... 488 e-136 ref|YP_004107942.1| 4-hydroxy-2-oxovalerate aldolase [Rhodopseud... 436 e-120 ref|YP_001993247.1| HpcH/HpaI aldolase [Rhodopseudomonas palustr... 436 e-120 >ref|YP_001204654.1| putative aldolase [Bradyrhizobium sp. ORS 278] emb|CAL76417.1| putative aldolase [Bradyrhizobium sp. ORS 278] Length = 259 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 235/256 (91%), Positives = 248/256 (96%) Query: 3 NKVKQVWASGKAVVNAWLAIPSGFSAEVIAQCGFDSVTVDMQHGVQDYQSMVQCFQSMHA 62 NKVKQ+WA GK VVNAWLAIPSGFSAEV+AQCGFDSVTVDMQHGVQDY SMVQCFQ+MH Sbjct: 4 NKVKQLWAEGKTVVNAWLAIPSGFSAEVVAQCGFDSVTVDMQHGVQDYLSMVQCFQAMHG 63 Query: 63 HPVTPMVRVPWNEPGIIGKVLDGGSYGVICPMVNTPQEAKNLVSYAKYPPKGVRSNGPIR 122 HPVTPMVRVPWNEPGIIGKVLDGG+YGVICPMVNTPQEA+NLVSY+KYPPKGVRSNGPIR Sbjct: 64 HPVTPMVRVPWNEPGIIGKVLDGGAYGVICPMVNTPQEARNLVSYSKYPPKGVRSNGPIR 123 Query: 123 AGMYGSAGTYQQTANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGLVP 182 +GMYGSAG YQ+TANDEIVLLPMMET+TAVENMEAILDVEGIDGVYIGPSDLGFSYGLVP Sbjct: 124 SGMYGSAGEYQKTANDEIVLLPMMETRTAVENMEAILDVEGIDGVYIGPSDLGFSYGLVP 183 Query: 183 KLDRDEPEILKIYEKIIKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQVY 242 KLDRDEPEILKIYEKI+KECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQVY Sbjct: 184 KLDRDEPEILKIYEKIVKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQVY 243 Query: 243 AKMQVNATREKSGGKA 258 A+ QV TR++SGGKA Sbjct: 244 ARQQVAQTRKESGGKA 259 >ref|YP_001238977.1| putative aldolase [Bradyrhizobium sp. BTAi1] gb|ABQ35071.1| putative aldolase [Bradyrhizobium sp. BTAi1] Length = 259 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 236/256 (92%), Positives = 248/256 (96%) Query: 3 NKVKQVWASGKAVVNAWLAIPSGFSAEVIAQCGFDSVTVDMQHGVQDYQSMVQCFQSMHA 62 NKVKQ+WA GKAVVNAWLAIPSGFSAEV+AQCGFDSVTVDMQHGVQDY SMVQCFQ+MH Sbjct: 4 NKVKQLWAEGKAVVNAWLAIPSGFSAEVVAQCGFDSVTVDMQHGVQDYLSMVQCFQAMHG 63 Query: 63 HPVTPMVRVPWNEPGIIGKVLDGGSYGVICPMVNTPQEAKNLVSYAKYPPKGVRSNGPIR 122 HPVTPMVRVPWNEPGIIGKVLDGG+YGVICPMVNTPQEA+NLVSY+KYPPKGVRSNGPIR Sbjct: 64 HPVTPMVRVPWNEPGIIGKVLDGGAYGVICPMVNTPQEARNLVSYSKYPPKGVRSNGPIR 123 Query: 123 AGMYGSAGTYQQTANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGLVP 182 +GMYG AG YQ+TANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGLVP Sbjct: 124 SGMYGGAGEYQKTANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGLVP 183 Query: 183 KLDRDEPEILKIYEKIIKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQVY 242 KLDRDEPEILKIYEKI+KECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQVY Sbjct: 184 KLDRDEPEILKIYEKIVKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQVY 243 Query: 243 AKMQVNATREKSGGKA 258 A+ QV TR++SGGKA Sbjct: 244 ARQQVAQTRKESGGKA 259 >ref|NP_769613.1| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Bradyrhizobium japonicum USDA 110] dbj|BAC48238.1| hpcH [Bradyrhizobium japonicum USDA 110] Length = 271 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 230/258 (89%), Positives = 245/258 (94%) Query: 1 MANKVKQVWASGKAVVNAWLAIPSGFSAEVIAQCGFDSVTVDMQHGVQDYQSMVQCFQSM 60 +ANKVK++W SGKAVVNAWLAIPSGFSAE+IAQCGFDSVTVDMQHGVQDY SMVQCFQ+M Sbjct: 14 VANKVKEIWKSGKAVVNAWLAIPSGFSAEMIAQCGFDSVTVDMQHGVQDYLSMVQCFQAM 73 Query: 61 HAHPVTPMVRVPWNEPGIIGKVLDGGSYGVICPMVNTPQEAKNLVSYAKYPPKGVRSNGP 120 HPVTPMVRVPWNEPGIIGKVLDGG+YGVICPMVNTPQEA+NLVSY+KYPP+GVRSNGP Sbjct: 74 DKHPVTPMVRVPWNEPGIIGKVLDGGAYGVICPMVNTPQEARNLVSYSKYPPQGVRSNGP 133 Query: 121 IRAGMYGSAGTYQQTANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGL 180 IRAGMYG+AG+YQ+TAN + +LLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGL Sbjct: 134 IRAGMYGTAGSYQKTANADTILLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGL 193 Query: 181 VPKLDRDEPEILKIYEKIIKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQ 240 PKLDR EPEIL IYEKIIKECGKRGLNPGIHCSGAEGA RAINMGFKLVTLSNEVGLM Sbjct: 194 EPKLDRSEPEILAIYEKIIKECGKRGLNPGIHCSGAEGAARAINMGFKLVTLSNEVGLMT 253 Query: 241 VYAKMQVNATREKSGGKA 258 YAKMQVNATR+ SGGKA Sbjct: 254 TYAKMQVNATRKDSGGKA 271 >ref|YP_004107942.1| 4-hydroxy-2-oxovalerate aldolase [Rhodopseudomonas palustris DX-1] gb|ADU43209.1| 4-hydroxy-2-oxovalerate aldolase [Rhodopseudomonas palustris DX-1] Length = 258 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 204/258 (79%), Positives = 228/258 (88%) Query: 1 MANKVKQVWASGKAVVNAWLAIPSGFSAEVIAQCGFDSVTVDMQHGVQDYQSMVQCFQSM 60 MANKVKQ+WA GK VVN WLAIPSGFSAEV+AQCGFDSVTVD+QHGVQDYQSMV CFQ+M Sbjct: 1 MANKVKQLWADGKVVVNGWLAIPSGFSAEVMAQCGFDSVTVDLQHGVQDYQSMVTCFQAM 60 Query: 61 HAHPVTPMVRVPWNEPGIIGKVLDGGSYGVICPMVNTPQEAKNLVSYAKYPPKGVRSNGP 120 AHPVTPMVRVPWNEPGIIGKVLDGG++GVICPMVNT +EA+N V Y KYPP+G RSNGP Sbjct: 61 QAHPVTPMVRVPWNEPGIIGKVLDGGAFGVICPMVNTKEEAENFVQYCKYPPRGTRSNGP 120 Query: 121 IRAGMYGSAGTYQQTANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGL 180 IRAG+YGS+G YQ TANDE + +PM+ET+TAVENMEAILDVEGI GVYIGPSDLGFSYGL Sbjct: 121 IRAGLYGSSGNYQATANDETLCIPMIETRTAVENMEAILDVEGIAGVYIGPSDLGFSYGL 180 Query: 181 VPKLDRDEPEILKIYEKIIKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQ 240 VPKLDRDEPEILKIY+K++KEC KRGL PGIHCSG EGA R I +GFKLVTL N+ G+M Sbjct: 181 VPKLDRDEPEILKIYDKLLKECDKRGLYPGIHCSGPEGAARNIALGFKLVTLLNDSGIMA 240 Query: 241 VYAKMQVNATREKSGGKA 258 + A+ V TR+ SGGKA Sbjct: 241 IGARSWVAETRKNSGGKA 258 >ref|YP_001993247.1| HpcH/HpaI aldolase [Rhodopseudomonas palustris TIE-1] gb|ACF02772.1| HpcH/HpaI aldolase [Rhodopseudomonas palustris TIE-1] Length = 258 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 204/258 (79%), Positives = 228/258 (88%) Query: 1 MANKVKQVWASGKAVVNAWLAIPSGFSAEVIAQCGFDSVTVDMQHGVQDYQSMVQCFQSM 60 MANKVKQ+WA GK VVN WLAIPSGFSAEV+AQCGFDSVTVD+QHGVQDYQSMV CFQ+M Sbjct: 1 MANKVKQLWADGKVVVNGWLAIPSGFSAEVMAQCGFDSVTVDIQHGVQDYQSMVTCFQAM 60 Query: 61 HAHPVTPMVRVPWNEPGIIGKVLDGGSYGVICPMVNTPQEAKNLVSYAKYPPKGVRSNGP 120 AHPVTPMVRVPWNEPGIIGKVLDGG+YGVICPMVNT +EA+N V Y KYPP+G RSNGP Sbjct: 61 QAHPVTPMVRVPWNEPGIIGKVLDGGAYGVICPMVNTKEEAENFVQYCKYPPRGTRSNGP 120 Query: 121 IRAGMYGSAGTYQQTANDEIVLLPMMETKTAVENMEAILDVEGIDGVYIGPSDLGFSYGL 180 IRAG+YGS+G YQ TANDE + +PM+ET+TAVENME+ILDVEGI GVYIGPSDLGFSYGL Sbjct: 121 IRAGLYGSSGNYQATANDETLCIPMIETRTAVENMESILDVEGIAGVYIGPSDLGFSYGL 180 Query: 181 VPKLDRDEPEILKIYEKIIKECGKRGLNPGIHCSGAEGAVRAINMGFKLVTLSNEVGLMQ 240 VPKLDRDEPEILKIY+K++KEC KRGL PGIHCSG EGA R I +GFKLVTL N+ G+M Sbjct: 181 VPKLDRDEPEILKIYDKLLKECDKRGLYPGIHCSGPEGAARNIALGFKLVTLLNDSGIMA 240 Query: 241 VYAKMQVNATREKSGGKA 258 + A+ V TR+ SGGKA Sbjct: 241 IGARSWVAETRKNSGGKA 258