BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0064.0018.p         (65 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003694317.1| hypothetical protein Snov_2403 [Starkeya nov...    69   2e-10
ref|YP_002490217.1| hypothetical protein Mnod_8059 [Methylobacte...    63   2e-08
ref|YP_002289839.1| hypothetical protein OCAR_6865 [Oligotropha ...    57   1e-06
ref|ZP_08631113.1| hypothetical protein CSIRO_4224 [Bradyrhizobi...    35   4.0  

>ref|YP_003694317.1| hypothetical protein Snov_2403 [Starkeya novella DSM 506]
 gb|ADH89698.1| conserved hypothetical protein [Starkeya novella DSM 506]
          Length = 60

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 1  MPSHIKLMLSLACLATAACGYIFMVYLGQQGPSYAVAFLGVFATVAMWIFPEVVKKDLK 59
          MP+ +KL +SL  +  AA GY    +LGQ GP YAV FLG F  +AMW+FPEV +K+++
Sbjct: 1  MPTIVKLTISLIVILVAAAGYALQAHLGQVGPKYAVLFLGAFMVIAMWLFPEVSRKEIR 59


>ref|YP_002490217.1| hypothetical protein Mnod_8059 [Methylobacterium nodulans ORS
          2060]
 gb|ACL63050.1| hypothetical protein Mnod_8059 [Methylobacterium nodulans ORS
          2060]
          Length = 73

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 38/63 (60%)

Query: 1  MPSHIKLMLSLACLATAACGYIFMVYLGQQGPSYAVAFLGVFATVAMWIFPEVVKKDLKM 60
          MP  IK  LS+A    A  G+ +M YLGQ GP  AVAFLG F   ++WIFPEV++     
Sbjct: 1  MPFRIKFGLSIAVALAAVAGWFYMGYLGQIGPQRAVAFLGPFMVFSLWIFPEVMRNRSDG 60

Query: 61 RPP 63
          R P
Sbjct: 61 RTP 63


>ref|YP_002289839.1| hypothetical protein OCAR_6865 [Oligotropha carboxidovorans OM5]
 ref|YP_004632173.1| hypothetical protein OCA5_c12140 [Oligotropha carboxidovorans
          OM5]
 gb|ACI93974.1| hypothetical protein OCAR_6865 [Oligotropha carboxidovorans OM5]
 gb|AEI02356.1| hypothetical protein OCA4_c12140 [Oligotropha carboxidovorans
          OM4]
 gb|AEI05932.1| hypothetical protein OCA5_c12140 [Oligotropha carboxidovorans
          OM5]
          Length = 66

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%)

Query: 1  MPSHIKLMLSLACLATAACGYIFMVYLGQQGPSYAVAFLGVFATVAMWIFPEVVKKDLKM 60
          MP HIKLM+S+    TAA  +     +G     Y +AFLG+F   AMW+FPEV +++   
Sbjct: 1  MPFHIKLMISIVTAITAAVAFYMQGQIGHVREQYLIAFLGLFMVFAMWLFPEVKREERPN 60

Query: 61 RPPGS 65
          R   S
Sbjct: 61 RNKQS 65


>ref|ZP_08631113.1| hypothetical protein CSIRO_4224 [Bradyrhizobiaceae bacterium
          SG-6C]
 gb|EGP06214.1| hypothetical protein CSIRO_4224 [Bradyrhizobiaceae bacterium
          SG-6C]
          Length = 63

 Score = 35.0 bits (79), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 1  MPSHIKLMLSLACLATAACGYIFMVYLGQQGPSYAVAFLGVFATVAMWIFPEVVKK 56
          M   IKL++S   L  AAC   +   +G   P+     +G+F   A+W+FP+V +K
Sbjct: 1  MLVKIKLVISTLVLLVAACIAFYDYRIGLYPPAAVALGVGMFVVFAIWVFPDVKRK 56