BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0063.0011.p (397 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS... 482 e-134 ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] ... 478 e-133 ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis ... 474 e-131 ref|YP_003811208.1| Acyl-CoA dehydrogenase [gamma proteobacteriu... 456 e-126 ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchisepti... 446 e-123 >ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666] gb|ABE47124.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666] Length = 381 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/375 (60%), Positives = 291/375 (77%), Gaps = 1/375 (0%) Query: 24 LPEELRMLREQVRRFVEKEVVPHAEAWERDGKIPREIYRRMGALGFLGMRHAAEYGGTDM 83 E+ R R+ +RRFVE+EVVP A WE G +PR + R+MG LG+LG+R+ +YGG+ + Sbjct: 7 FDEQHRQFRDNLRRFVEQEVVPQAAPWEEQGMVPRAVLRKMGELGYLGIRYDEQYGGSKL 66 Query: 84 GPLASMVFAEELGRSSFGGFTSSILVHTDMSAVHISLRGTPEQKQKYLPAIIRGETVCSI 143 + S + AEELGRS+FGGF +++VHTDM++ H++ G+PEQ Q+YLP IIRGE +C++ Sbjct: 67 DTVYSAILAEELGRSTFGGFAVTVMVHTDMASPHLANFGSPEQLQRYLPPIIRGEKICAV 126 Query: 144 AVTEPDAGSDVAGLKTRARRDGDFWVINGAKMFITNAVYGDLLIVAARTDPHAKGSRGIS 203 AVTEPDAGSDVAG++TRA R+GD WVING+KMFITN V GD+ VAA+TDP AKGSRGIS Sbjct: 127 AVTEPDAGSDVAGIRTRAVREGDEWVINGSKMFITNGVQGDVYFVAAKTDPTAKGSRGIS 186 Query: 204 LFIVERNTPGITATK-LDKHGWLCSDTAELAFQDVRVPAENLLGEENKGFYGIMETFQNE 262 +FIVE+ TPG + L+K GWLCSDTAEL F++ R+PA NLLGEENKGFY IM FQNE Sbjct: 187 IFIVEKGTPGFRVGRALNKSGWLCSDTAELVFENCRIPAANLLGEENKGFYQIMRNFQNE 246 Query: 263 RICIGGICAGESAKAIELTANYVKTRQAFGGPLWKQQGVRLKLAQLAAKAAAARALAYQA 322 R+ +G GE+A+AIELT +YV+ R+AFG LW +Q +R +LA A++ AAAR L Y A Sbjct: 247 RMVLGAQTMGEAARAIELTLDYVRERKAFGATLWDKQAIRQRLAMRASQVAAARQLVYHA 306 Query: 323 AELAAAGQDCLREVSMVKALSPEVLHEVVHGCLQLHGGSGFMRGTPIERMVRDARVLTIG 382 A L A G++C++EVSMVKAL ++++VV+ C Q HGG G+MR IERMVRDARV IG Sbjct: 307 AWLDAQGRECVKEVSMVKALCGNLVNDVVYDCQQFHGGFGYMREAAIERMVRDARVQAIG 366 Query: 383 GGATEVMLEEVAKRM 397 GGATEVMLEEVAKR+ Sbjct: 367 GGATEVMLEEVAKRL 381 >ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] gb|EAQ23809.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] Length = 388 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 219/375 (58%), Positives = 290/375 (77%), Gaps = 1/375 (0%) Query: 24 LPEELRMLREQVRRFVEKEVVPHAEAWERDGKIPREIYRRMGALGFLGMRHAAEYGGTDM 83 E+L M+R Q+RRF+E EV AE WE+DG +PR++ RRMG LG LGMR+ +YGG+ + Sbjct: 14 FSEDLNMIRAQLRRFIETEVTAKAEPWEKDGMVPRDVLRRMGDLGVLGMRYDEQYGGSGL 73 Query: 84 GPLASMVFAEELGRSSFGGFTSSILVHTDMSAVHISLRGTPEQKQKYLPAIIRGETVCSI 143 ++S+V AEE+GRS+FGGF++++LVHTDM++ H+ G+PEQK +++P+I GE + ++ Sbjct: 74 NVMSSVVLAEEVGRSTFGGFSATVLVHTDMASPHLENAGSPEQKARWMPSITSGEKIAAV 133 Query: 144 AVTEPDAGSDVAGLKTRARRDGDFWVINGAKMFITNAVYGDLLIVAARTDPHAKGSRGIS 203 AVTEP AGSDVAG++TRA +DG WVING KMFITN V+GD+ V A+TDP AKGSRGI+ Sbjct: 134 AVTEPGAGSDVAGMRTRAVQDGSDWVINGTKMFITNGVHGDIYFVGAKTDPDAKGSRGIT 193 Query: 204 LFIVERNTPGITATK-LDKHGWLCSDTAELAFQDVRVPAENLLGEENKGFYGIMETFQNE 262 +F VE+ TPG + + L+K GWLCSDTAEL F+DVR+PAEN+LGE N+GFY +M+ FQNE Sbjct: 194 MFAVEKGTPGFSVGRALNKTGWLCSDTAELIFEDVRIPAENVLGEVNRGFYSVMKNFQNE 253 Query: 263 RICIGGICAGESAKAIELTANYVKTRQAFGGPLWKQQGVRLKLAQLAAKAAAARALAYQA 322 RI +G + E+ A+E+T +YVK R+AFGG LW +Q VR +LA + A R L Y A Sbjct: 254 RIVLGAMACAEAQSALEMTVDYVKQRKAFGGVLWDKQTVRQRLADCQTRIEAGRQLIYHA 313 Query: 323 AELAAAGQDCLREVSMVKALSPEVLHEVVHGCLQLHGGSGFMRGTPIERMVRDARVLTIG 382 A L AAG+DC++EVSMVKA E+++ V++ C+Q HGG G+MR TP+ERM RDARV IG Sbjct: 314 ASLDAAGRDCVKEVSMVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAIG 373 Query: 383 GGATEVMLEEVAKRM 397 GGATEVMLEEVAKRM Sbjct: 374 GGATEVMLEEVAKRM 388 >ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gb|EAQ02469.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 388 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 216/375 (57%), Positives = 290/375 (77%), Gaps = 1/375 (0%) Query: 24 LPEELRMLREQVRRFVEKEVVPHAEAWERDGKIPREIYRRMGALGFLGMRHAAEYGGTDM 83 L E+L ++R Q+RRF+E EV+ AE WE +GK+PR++ RRMG LG LGMR+ +YGG + Sbjct: 14 LNEDLELIRNQLRRFIEAEVIAKAEPWEEEGKVPRDVLRRMGDLGVLGMRYDEQYGGAGL 73 Query: 84 GPLASMVFAEELGRSSFGGFTSSILVHTDMSAVHISLRGTPEQKQKYLPAIIRGETVCSI 143 ++S+V AEE+GRS+FGGF++++LVHTDM++ H+ GTPEQK +++P+I+ GE + ++ Sbjct: 74 DVMSSVVLAEEVGRSTFGGFSATVLVHTDMASPHLENAGTPEQKARWMPSIVSGEMITAV 133 Query: 144 AVTEPDAGSDVAGLKTRARRDGDFWVINGAKMFITNAVYGDLLIVAARTDPHAKGSRGIS 203 AVTEP AGSDVAG++TRA +DG WV+NG KMFITN V+GDL V A+TDP AKGSRGI+ Sbjct: 134 AVTEPGAGSDVAGMRTRAVQDGSDWVLNGTKMFITNGVHGDLYFVGAKTDPDAKGSRGIT 193 Query: 204 LFIVERNTPGITATK-LDKHGWLCSDTAELAFQDVRVPAENLLGEENKGFYGIMETFQNE 262 +F VE+ TPG + + L+K GWLCSDTAEL F++VR+P EN+LGE N GFY +M+ FQNE Sbjct: 194 MFAVEKGTPGFSVGRALNKTGWLCSDTAELIFEEVRIPTENVLGEVNHGFYSVMKNFQNE 253 Query: 263 RICIGGICAGESAKAIELTANYVKTRQAFGGPLWKQQGVRLKLAQLAAKAAAARALAYQA 322 RI +G + E+ A+++T +YVK R+AFGG LW +Q VR +LA + A R L Y A Sbjct: 254 RIVLGAMACAEAQTALDITVDYVKQRKAFGGALWDKQAVRQRLADCQTRIVAGRQLVYHA 313 Query: 323 AELAAAGQDCLREVSMVKALSPEVLHEVVHGCLQLHGGSGFMRGTPIERMVRDARVLTIG 382 A L AAG+DC++EVSMVKA E+++ V++ C+Q HGG G+MR TP+ERM RDARV IG Sbjct: 314 AGLDAAGRDCVKEVSMVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAIG 373 Query: 383 GGATEVMLEEVAKRM 397 GGA+EVMLEEVAKRM Sbjct: 374 GGASEVMLEEVAKRM 388 >ref|YP_003811208.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] emb|CBL45563.1| Acyl-CoA dehydrogenase [gamma proteobacterium HdN1] Length = 380 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/379 (57%), Positives = 284/379 (74%), Gaps = 1/379 (0%) Query: 20 EQPNLPEELRMLREQVRRFVEKEVVPHAEAWERDGKIPREIYRRMGALGFLGMRHAAEYG 79 + P EE +LR Q+R+FVE E+VP+ +AWE+DG +PRE R+MG LG+LG+ H +YG Sbjct: 2 KTPYFSEEHAILRAQIRKFVETEIVPNGDAWEQDGSVPREFLRKMGELGYLGLMHEEKYG 61 Query: 80 GTDMGPLASMVFAEELGRSSFGGFTSSILVHTDMSAVHISLRGTPEQKQKYLPAIIRGET 139 G+ M A+ + AEELGRS++ G T + LVHT+M++ H++ G+ QKQKYLP ++ G+ Sbjct: 62 GSGMDVRAATILAEELGRSTYAGVTITALVHTNMASPHLANAGSVAQKQKYLPDVVSGKK 121 Query: 140 VCSIAVTEPDAGSDVAGLKTRARRDGDFWVINGAKMFITNAVYGDLLIVAARTDPHAKGS 199 + +I VTEP AGSDVAG+KTRA RDG+ WVING+K+FITN V+GDL VAA+TDP AKGS Sbjct: 122 ITAICVTEPGAGSDVAGIKTRAVRDGNDWVINGSKIFITNGVFGDLYFVAAKTDPGAKGS 181 Query: 200 RGISLFIVERNTPGITATK-LDKHGWLCSDTAELAFQDVRVPAENLLGEENKGFYGIMET 258 RGIS+FIVE+ TPG + + L KHGW SDTAEL F +VRVP ENLLGEENKGFY +M+ Sbjct: 182 RGISIFIVEKGTPGFSVGRSLKKHGWRSSDTAELFFDNVRVPVENLLGEENKGFYAVMKN 241 Query: 259 FQNERICIGGICAGESAKAIELTANYVKTRQAFGGPLWKQQGVRLKLAQLAAKAAAARAL 318 FQ+ERI + + GE+ KAIE+T + VK RQAFG PL+ + VR LA++ K A A+ Sbjct: 242 FQHERIMLAAMGVGEAQKAIEITLDNVKQRQAFGAPLFSKDVVRDNLARMQTKIALAQNY 301 Query: 319 AYQAAELAAAGQDCLREVSMVKALSPEVLHEVVHGCLQLHGGSGFMRGTPIERMVRDARV 378 Y A L A G DC++EVSM+KA + E+ +EV++GC+QLHGG GFM + IERM RDARV Sbjct: 302 LYYVAWLDAQGVDCIKEVSMLKANACEIANEVMYGCVQLHGGMGFMMESTIERMSRDARV 361 Query: 379 LTIGGGATEVMLEEVAKRM 397 LTIGGG TE+M EVAKRM Sbjct: 362 LTIGGGTTEIMYGEVAKRM 380 >ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE31081.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 385 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/380 (56%), Positives = 276/380 (72%), Gaps = 1/380 (0%) Query: 19 SEQPNLPEELRMLREQVRRFVEKEVVPHAEAWERDGKIPREIYRRMGALGFLGMRHAAEY 78 S P L EE +LR QVRRFVE+EV+PHA+AWE DG PR + RRMG LG LGMR Y Sbjct: 6 SNLPGLKEEHELLRSQVRRFVEREVIPHAQAWEHDGHTPRPVIRRMGELGMLGMRFPESY 65 Query: 79 GGTDMGPLASMVFAEELGRSSFGGFTSSILVHTDMSAVHISLRGTPEQKQKYLPAIIRGE 138 GG D +AS+VFAEELGRS+FGGF +IL TD ++ I+ GTP+QK +YLPAI+RGE Sbjct: 66 GGADADTVASVVFAEELGRSTFGGFAITILTQTDTASPPIAAVGTPQQKARYLPAIVRGE 125 Query: 139 TVCSIAVTEPDAGSDVAGLKTRARRDGDFWVINGAKMFITNAVYGDLLIVAARTDPHAKG 198 + +IA+TEPD GSD+A L+TRA RDGD WV++GAK FITN V+ DL +VAARTD A+ Sbjct: 126 CLVAIAMTEPDVGSDIATLRTRAVRDGDEWVLDGAKTFITNGVHADLYVVAARTDASARP 185 Query: 199 SRGISLFIVERNTPGI-TATKLDKHGWLCSDTAELAFQDVRVPAENLLGEENKGFYGIME 257 S+G+SLF+V++ TPG+ +LDK GW SDTA+L+F RVPA LLGE N+GF +M Sbjct: 186 SQGVSLFLVDKGTPGLRVERRLDKMGWKSSDTAQLSFDGCRVPAGALLGEPNRGFAALMR 245 Query: 258 TFQNERICIGGICAGESAKAIELTANYVKTRQAFGGPLWKQQGVRLKLAQLAAKAAAARA 317 QNER+ + GES AI T +Y + R+AFG LW +Q +R +LA LAA+ +AR Sbjct: 246 NVQNERLVLAAQALGESQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARVESARH 305 Query: 318 LAYQAAELAAAGQDCLREVSMVKALSPEVLHEVVHGCLQLHGGSGFMRGTPIERMVRDAR 377 Y A L A G +C++EVSM+KAL E+++EV+ C+Q HG +G+M+GT +ERM RDAR Sbjct: 306 FVYSVAALDARGVECVKEVSMIKALCGELVNEVMDDCVQFHGATGYMQGTAVERMYRDAR 365 Query: 378 VLTIGGGATEVMLEEVAKRM 397 V IGGGATE+MLEEVAKRM Sbjct: 366 VHAIGGGATEIMLEEVAKRM 385