BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0063.0009.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_889681.1| 3-oxoacyl-CoA or-ACP reductase [Bordetella bron... 264 1e-68 ref|NP_885024.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordet... 263 2e-68 ref|NP_880754.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordet... 263 2e-68 ref|YP_003184630.1| short-chain dehydrogenase/reductase SDR [Ali... 220 2e-55 ref|ZP_03494879.1| short-chain dehydrogenase/reductase SDR [Alic... 219 2e-55 >ref|NP_889681.1| 3-oxoacyl-CoA or-ACP reductase [Bordetella bronchiseptica RB50] emb|CAE33637.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordetella bronchiseptica RB50] Length = 240 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 140/237 (59%), Positives = 164/237 (69%) Query: 12 RRAFVSGGARGIGAAIARSFAGAGARVVIADLDVAAASELARETGADVAGLDVSDAMAVQ 71 R A V+GGA GIGAA G RV D D A + +A+ TGA LD +DA AV Sbjct: 3 RHALVTGGANGIGAATVAQLCRDGLRVTFCDRDAQAGASVAQATGARFVALDATDAEAVA 62 Query: 72 AVMAQDGPFDIVVNNAGVDQHAFFTDTTAEDWARLIAVNLTSVLACTHAALPAMQAARFG 131 A PFDI+VNN G DQHAFF+ TT +DW L+AVNL S A T LP MQAARFG Sbjct: 63 GFCAGAAPFDILVNNVGADQHAFFSRTTPQDWRALLAVNLESAFAFTLGVLPGMQAARFG 122 Query: 132 RIINVTSEAARLGSKGGAVYSAAKGGVISFTRSIARENARYGITANAIAPGPIRTPMLEQ 191 RI+NV+SEA RLGS+GGAVY+AAK G++ FTRSIARENARYG+TANA+ PGP+ TPML + Sbjct: 123 RIVNVSSEAGRLGSRGGAVYAAAKAGLLGFTRSIARENARYGVTANAVLPGPVDTPMLAR 182 Query: 192 AVAKGGDRILQAMTGATLLGRLGEPEEVAAAALFLASDQAAYITGETLGVSGGMGIG 248 AV G ++ + TLL RLG PEEVAAA FL S+ A +ITGE LGVSGGMG G Sbjct: 183 AVDVAGAQMRADLEALTLLRRLGRPEEVAAAIAFLCSEAAGFITGEALGVSGGMGCG 239 >ref|NP_885024.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordetella parapertussis 12822] emb|CAE38116.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordetella parapertussis] Length = 240 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 140/237 (59%), Positives = 164/237 (69%) Query: 12 RRAFVSGGARGIGAAIARSFAGAGARVVIADLDVAAASELARETGADVAGLDVSDAMAVQ 71 R A V+GGA GIGAA G RV D D A + +A+ TGA LD +DA AV Sbjct: 3 RHALVTGGANGIGAATVAQLCRDGLRVTFCDRDAQAGASVAQATGARFVALDATDAEAVA 62 Query: 72 AVMAQDGPFDIVVNNAGVDQHAFFTDTTAEDWARLIAVNLTSVLACTHAALPAMQAARFG 131 A PFDI+VNN G DQHAFF+ TT +DW L+AVNL S A T LP MQAARFG Sbjct: 63 GFCAGAAPFDILVNNVGADQHAFFSRTTPQDWRALLAVNLESAFAFTLGVLPGMQAARFG 122 Query: 132 RIINVTSEAARLGSKGGAVYSAAKGGVISFTRSIARENARYGITANAIAPGPIRTPMLEQ 191 RI+NV+SEA RLGS+GGAVY+AAK G++ FTRSIARENARYG+TANA+ PGP+ TPML + Sbjct: 123 RIVNVSSEAGRLGSRGGAVYAAAKAGLLGFTRSIARENARYGVTANAVLPGPVDTPMLAR 182 Query: 192 AVAKGGDRILQAMTGATLLGRLGEPEEVAAAALFLASDQAAYITGETLGVSGGMGIG 248 AV G ++ + TLL RLG PEEVAAA FL S+ A +ITGE LGVSGGMG G Sbjct: 183 AVDVAGAQMRVDLEALTLLRRLGRPEEVAAAIAFLCSEAAGFITGEALGVSGGMGCG 239 >ref|NP_880754.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordetella pertussis Tohama I] emb|CAE42372.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordetella pertussis Tohama I] gb|AEE67369.1| putative 3-oxoacyl-CoA or-ACP reductase [Bordetella pertussis CS] Length = 240 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 140/237 (59%), Positives = 163/237 (68%) Query: 12 RRAFVSGGARGIGAAIARSFAGAGARVVIADLDVAAASELARETGADVAGLDVSDAMAVQ 71 R A V+GGA GIGAA G RV D D A + +A TGA LD +DA AV Sbjct: 3 RHALVTGGANGIGAATVAQLCRDGLRVTFCDRDAQAGASVAEATGARFVALDATDAEAVA 62 Query: 72 AVMAQDGPFDIVVNNAGVDQHAFFTDTTAEDWARLIAVNLTSVLACTHAALPAMQAARFG 131 A PFDI+VNN G DQHAFF+ TT +DW L+AVNL S A T LP MQAARFG Sbjct: 63 GFCAGAAPFDILVNNVGADQHAFFSRTTPQDWRALLAVNLESAFAFTLGVLPGMQAARFG 122 Query: 132 RIINVTSEAARLGSKGGAVYSAAKGGVISFTRSIARENARYGITANAIAPGPIRTPMLEQ 191 RI+NV+SEA RLGS+GGAVY+AAK G++ FTRSIARENARYG+TANA+ PGP+ TPML + Sbjct: 123 RIVNVSSEAGRLGSRGGAVYAAAKAGLLGFTRSIARENARYGVTANAVLPGPVDTPMLAR 182 Query: 192 AVAKGGDRILQAMTGATLLGRLGEPEEVAAAALFLASDQAAYITGETLGVSGGMGIG 248 AV G ++ + TLL RLG PEEVAAA FL S+ A +ITGE LGVSGGMG G Sbjct: 183 AVDVAGAQMRADLEALTLLRRLGRPEEVAAAIAFLCSEAAGFITGEALGVSGGMGCG 239 >ref|YP_003184630.1| short-chain dehydrogenase/reductase SDR [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gb|ACV58241.1| short-chain dehydrogenase/reductase SDR [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 250 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 120/248 (48%), Positives = 158/248 (63%), Gaps = 12/248 (4%) Query: 8 RLDGRRAFVSGGARGIGAAIARSFAGAGARVVIADLDVAAASELARETG----------A 57 +L+ R A V+GGARGIG AI FA GARV + DLD+ A E + A Sbjct: 2 KLEDRVAIVTGGARGIGRAICERFAAEGARVAVVDLDLDGACETSERLCGVGAEAVAVRA 61 Query: 58 DVAGLDVSDAMAVQAVMAQDGPFDIVVNNAGVDQHAFFTDTTAEDWARLIAVNLTSVLAC 117 DV D AM V VM Q G DI+VNNAG D+ F D+ E W +++A+NL SVL Sbjct: 62 DVTRRDEVQAM-VGKVMEQFGRIDILVNNAGWDRIELFLDSQEETWEKILAINLKSVLYT 120 Query: 118 THAALPAMQAARFGRIINVTSEAARLGSKGGAVYSAAKGGVISFTRSIARENARYGITAN 177 H LP M A +G+++N+ S+AAR+GS G AVY+AAKGGVI+F+++IARE A++ I N Sbjct: 121 CHEVLPHMVARSYGKVVNIGSDAARVGSTGEAVYAAAKGGVIAFSKAIAREMAKHRINVN 180 Query: 178 AIAPGPIRTPMLEQAVAKGGDRILQAMTGATLLGRLGEPEEVAAAALFLASDQAAYITGE 237 + PGP RTP+ Q +A D++ A+ A RL EPEE+A+A FLASD AA+ITG+ Sbjct: 181 VVCPGPARTPLF-QEIAGQNDKLASALERAIPFRRLAEPEEIASAVAFLASDDAAFITGQ 239 Query: 238 TLGVSGGM 245 TL VSGG+ Sbjct: 240 TLSVSGGL 247 >ref|ZP_03494879.1| short-chain dehydrogenase/reductase SDR [Alicyclobacillus acidocaldarius LAA1] gb|EED06437.1| short-chain dehydrogenase/reductase SDR [Alicyclobacillus acidocaldarius LAA1] Length = 250 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 122/248 (49%), Positives = 158/248 (63%), Gaps = 12/248 (4%) Query: 8 RLDGRRAFVSGGARGIGAAIARSFAGAGARVVIADLDVAAASELARE----------TGA 57 RL R A V+GGARGIG AI FA GARV + DLD+ A E + A Sbjct: 2 RLADRVAIVTGGARGIGRAICERFAEEGARVAVVDLDLDGARETSERLCALGGQSFGVRA 61 Query: 58 DVAGLDVSDAMAVQAVMAQDGPFDIVVNNAGVDQHAFFTDTTAEDWARLIAVNLTSVLAC 117 DV D AM V VM Q G DI+VNNAG D+ F D+ E W +++A+NL SVL Sbjct: 62 DVTRRDEVQAM-VGKVMEQFGRIDILVNNAGWDRIELFLDSQEETWEKILAINLKSVLYT 120 Query: 118 THAALPAMQAARFGRIINVTSEAARLGSKGGAVYSAAKGGVISFTRSIARENARYGITAN 177 HA LP M A +G+++N+ S+AAR+GS G AVY+AAKGGVI+F+++IARE A++ I N Sbjct: 121 CHAVLPHMIARSYGKVVNIGSDAARVGSTGEAVYAAAKGGVIAFSKTIAREMAKHRINVN 180 Query: 178 AIAPGPIRTPMLEQAVAKGGDRILQAMTGATLLGRLGEPEEVAAAALFLASDQAAYITGE 237 + PGP RTP+ Q +A D++ A+ A RL EPEE+A+A FLASD AA+ITG+ Sbjct: 181 VVCPGPARTPLF-QEIAGQNDKLASALERAIPFRRLAEPEEIASAVAFLASDDAAFITGQ 239 Query: 238 TLGVSGGM 245 TL VSGG+ Sbjct: 240 TLSVSGGL 247