BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0063.0006.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_885027.1| putative dioxygenase hydroxylase component [Bor... 585 e-165 ref|NP_880751.1| putative dioxygenase hydroxylase component [Bor... 585 e-165 ref|ZP_08120557.1| dioxygenase large subunit [Pseudonocardia sp.... 567 e-160 ref|YP_884202.1| dioxygenase large subunit [Mycobacterium avium ... 536 e-150 ref|ZP_06848099.1| possible benzoate 1,2-dioxygenase [Mycobacter... 533 e-149 >ref|NP_885027.1| putative dioxygenase hydroxylase component [Bordetella parapertussis 12822] ref|NP_889684.1| dioxygenase hydroxylase [Bordetella bronchiseptica RB50] emb|CAE38119.1| putative dioxygenase hydroxylase component [Bordetella parapertussis] emb|CAE33640.1| putative dioxygenase hydroxylase component [Bordetella bronchiseptica RB50] Length = 421 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 268/417 (64%), Positives = 323/417 (77%) Query: 1 MNMMTGASPWERLIRPDRVHGSLYTDPEIFEAELKNIWYRTWVYVGHESEVPNANDYVVK 60 M+ + + LI P R++ LY DPEIF+ EL IW+RTWVYVGH SEVPN NDYV K Sbjct: 4 MSSIRNEIDYRALIEPTRINSRLYVDPEIFQEELDKIWHRTWVYVGHVSEVPNKNDYVTK 63 Query: 61 SIGPQSVIMTRDEQGKVNLLLNRCSHRGNQVCSYERGNARSFTCPFHSWTFANDGRLVGY 120 SIG V++ RD G++ LLLN+C HRGNQ+C+Y+ GN +FTCP+HSWTF+N G L+GY Sbjct: 64 SIGTTPVLLLRDRDGEIRLLLNKCPHRGNQLCAYKEGNRSTFTCPYHSWTFSNTGDLMGY 123 Query: 121 AFPDGYEGQDKSQLALGRVTRVASYRGFVFGSFAADGPTLKEHLGGAAETIDRLVRTSPE 180 A DGYEG K+ + LG+V R+ YRGFVFGSFA GP+L EHLGGA ID+L SP Sbjct: 124 ALADGYEGASKAGVGLGKVARIGIYRGFVFGSFAETGPSLDEHLGGAKAAIDQLCDNSPN 183 Query: 181 GEVEITAGFLKHRVKANWKFILENECDGYHPAFVHTSIFGVADSMIGKLYGGASTALTRD 240 GE+++ AGFL+HR KANWKF+LENE DGYHP FVH SIF V +S I LYG STALTRD Sbjct: 184 GELDLRAGFLQHRAKANWKFMLENETDGYHPGFVHGSIFQVTNSPIANLYGKDSTALTRD 243 Query: 241 YGNGHTEIDLRPEFRKRDAPMSWFGTSEDRLPDYTARMKAAHGDTAAREIMIDGTPHVMI 300 YGNGHTE DLRPE+R+ D P+ WFG+S +R+ DY M A+G AR+IMIDG+PH MI Sbjct: 244 YGNGHTEFDLRPEWRRIDKPLYWFGSSVERMADYAVAMDQAYGAERARQIMIDGSPHTMI 303 Query: 301 FPNLFIAEIQMFVIQPLGVDDSVQHVTALQFKGAPDLNRRLRQQTMGSVGPAGFLLADDS 360 FPNLFIAEIQ+FV+QP+ V++++QHVTA+QFK APD+NRRLRQQTMGSVGPAG LLADD+ Sbjct: 304 FPNLFIAEIQIFVLQPVSVEETIQHVTAVQFKDAPDINRRLRQQTMGSVGPAGLLLADDT 363 Query: 361 EMYERCHRGVLARNPEWIFLGRGEKRERQDELGFTVGHVTDEVPSRGIWTHYRKLME 417 EMYER HRG R+PEW+ L RG RER+DE G+TVGH TDEVP RGIW HY KLM+ Sbjct: 364 EMYERNHRGAKIRDPEWLMLTRGLHRERKDENGYTVGHSTDEVPQRGIWRHYFKLMQ 420 >ref|NP_880751.1| putative dioxygenase hydroxylase component [Bordetella pertussis Tohama I] emb|CAE42369.1| putative dioxygenase hydroxylase component [Bordetella pertussis Tohama I] gb|AEE67366.1| putative dioxygenase hydroxylase component [Bordetella pertussis CS] Length = 418 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 268/417 (64%), Positives = 323/417 (77%) Query: 1 MNMMTGASPWERLIRPDRVHGSLYTDPEIFEAELKNIWYRTWVYVGHESEVPNANDYVVK 60 M+ + + LI P R++ LY DPEIF+ EL IW+RTWVYVGH SEVPN NDYV K Sbjct: 1 MSFIRNEIDYRALIEPTRINSRLYVDPEIFQEELDKIWHRTWVYVGHVSEVPNKNDYVTK 60 Query: 61 SIGPQSVIMTRDEQGKVNLLLNRCSHRGNQVCSYERGNARSFTCPFHSWTFANDGRLVGY 120 SIG V++ RD G++ LLLN+C HRGNQ+C+Y+ GN +FTCP+HSWTF+N G L+GY Sbjct: 61 SIGTTPVLLLRDRDGEIRLLLNKCPHRGNQLCAYKEGNRSTFTCPYHSWTFSNTGDLMGY 120 Query: 121 AFPDGYEGQDKSQLALGRVTRVASYRGFVFGSFAADGPTLKEHLGGAAETIDRLVRTSPE 180 A DGYEG K+ + LG+V R+ YRGFVFGSFA GP+L EHLGGA ID+L SP Sbjct: 121 ALADGYEGASKAGVGLGKVARIGIYRGFVFGSFAETGPSLDEHLGGAKAAIDQLCDNSPN 180 Query: 181 GEVEITAGFLKHRVKANWKFILENECDGYHPAFVHTSIFGVADSMIGKLYGGASTALTRD 240 GE+++ AGFL+HR KANWKF+LENE DGYHP FVH SIF V +S I LYG STALTRD Sbjct: 181 GELDLRAGFLQHRAKANWKFMLENETDGYHPGFVHGSIFQVTNSPIANLYGKDSTALTRD 240 Query: 241 YGNGHTEIDLRPEFRKRDAPMSWFGTSEDRLPDYTARMKAAHGDTAAREIMIDGTPHVMI 300 YGNGHTE DLRPE+R+ D P+ WFG+S +R+ DY M A+G AR+IMIDG+PH MI Sbjct: 241 YGNGHTEFDLRPEWRRIDKPLYWFGSSVERMADYAVAMDQAYGAERARQIMIDGSPHTMI 300 Query: 301 FPNLFIAEIQMFVIQPLGVDDSVQHVTALQFKGAPDLNRRLRQQTMGSVGPAGFLLADDS 360 FPNLFIAEIQ+FV+QP+ V++++QHVTA+QFK APD+NRRLRQQTMGSVGPAG LLADD+ Sbjct: 301 FPNLFIAEIQIFVLQPVSVEETIQHVTAVQFKDAPDINRRLRQQTMGSVGPAGLLLADDT 360 Query: 361 EMYERCHRGVLARNPEWIFLGRGEKRERQDELGFTVGHVTDEVPSRGIWTHYRKLME 417 EMYER HRG R+PEW+ L RG RER+DE G+TVGH TDEVP RGIW HY KLM+ Sbjct: 361 EMYERNHRGAKIRDPEWLMLTRGLHRERKDENGYTVGHSTDEVPQRGIWRHYFKLMQ 417 >ref|ZP_08120557.1| dioxygenase large subunit [Pseudonocardia sp. P1] Length = 428 Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust. Identities = 265/410 (64%), Positives = 312/410 (76%) Query: 7 ASPWERLIRPDRVHGSLYTDPEIFEAELKNIWYRTWVYVGHESEVPNANDYVVKSIGPQS 66 A+ ++ LIRP +VHGSLYTDP IF EL+ IWYR+WVYVGH SE+P NDYV KSIGPQ Sbjct: 14 AARYDELIRPQQVHGSLYTDPAIFADELRQIWYRSWVYVGHVSEIPEPNDYVRKSIGPQD 73 Query: 67 VIMTRDEQGKVNLLLNRCSHRGNQVCSYERGNARSFTCPFHSWTFANDGRLVGYAFPDGY 126 VIMTRD G V+LL+NRC+HRGN VC + GN+ SF CP+H WT+ N G ++GY F GY Sbjct: 74 VIMTRDGAGDVHLLMNRCAHRGNLVCEADAGNSSSFRCPYHGWTYRNTGEMLGYPFHQGY 133 Query: 127 EGQDKSQLALGRVTRVASYRGFVFGSFAADGPTLKEHLGGAAETIDRLVRTSPEGEVEIT 186 G++K L LGRV RV Y+GFVFGS A DGPTL EHLG A IDRLVR SPE E+E+T Sbjct: 134 GGRNKLDLGLGRVPRVGVYQGFVFGSMADDGPTLLEHLGEARHEIDRLVRLSPESEIELT 193 Query: 187 AGFLKHRVKANWKFILENECDGYHPAFVHTSIFGVADSMIGKLYGGASTALTRDYGNGHT 246 AGFLKH+ +ANWK + ENE DGYHP FVH SIF VA S IG LYG STA+TR GNGH+ Sbjct: 194 AGFLKHKARANWKLLAENETDGYHPQFVHASIFSVAQSGIGALYGEKSTAVTRALGNGHS 253 Query: 247 EIDLRPEFRKRDAPMSWFGTSEDRLPDYTARMKAAHGDTAAREIMIDGTPHVMIFPNLFI 306 E DLRPEFR+ AP+ WFGT+E+++P Y+A M+A HGD A EI+IDG PHVMIFPNLFI Sbjct: 254 ENDLRPEFRRLGAPLGWFGTTEEKVPGYSAAMRAKHGDAGAEEILIDGAPHVMIFPNLFI 313 Query: 307 AEIQMFVIQPLGVDDSVQHVTALQFKGAPDLNRRLRQQTMGSVGPAGFLLADDSEMYERC 366 AEIQ+F IQPL VD ++QHVTA+QFKGAP++NRR+ QQ +GSVGPAG LLADD+EMYER Sbjct: 314 AEIQLFAIQPLAVDRTIQHVTAVQFKGAPEMNRRMLQQCIGSVGPAGMLLADDTEMYERN 373 Query: 367 HRGVLARNPEWIFLGRGEKRERQDELGFTVGHVTDEVPSRGIWTHYRKLM 416 GV PEW+ + RG RE DE G T+G TDE RG W HYR LM Sbjct: 374 QAGVAELRPEWLDVRRGAHREEVDERGLTIGGATDETGMRGFWKHYRSLM 423 >ref|YP_884202.1| dioxygenase large subunit [Mycobacterium avium 104] gb|ABK64578.1| dioxygenase large subunit [Mycobacterium avium 104] Length = 422 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 256/413 (61%), Positives = 309/413 (74%), Gaps = 2/413 (0%) Query: 7 ASPWERLIRPDRVHGSLYTDPEIFEAELKNIWYRTWVYVGHESEVPNANDYVVKSIGPQS 66 A +ERLIRPD+VHGSLYTDP IF EL+ IWYRTWV+VGHESEV NDYV K +GPQ Sbjct: 12 AGRYERLIRPDKVHGSLYTDPSIFAEELRKIWYRTWVFVGHESEVAQPNDYVRKKLGPQD 71 Query: 67 VIMTRDEQGKVNLLLNRCSHRGNQVCSYERGNARSFTCPFHSWTFANDGRLVGYAFPDGY 126 VIMTRD G+++LLLNRC+HRGNQ+C +GN+ +F CP+H WTF N G L+G+ F GY Sbjct: 72 VIMTRDRDGQIHLLLNRCAHRGNQLCDDAQGNSGTFRCPYHGWTFRNTGELIGFPFFRGY 131 Query: 127 EGQDKSQLALGRVTRVASYRGFVFGSFAADGPTLKEHLGGAAETIDRLVRTSPEGEVEIT 186 G+ K L LGRV RV SY GFVFGSFA DGP+L EHLG AA IDRL SP+G +E+T Sbjct: 132 GGR-KLDLTLGRVPRVDSYGGFVFGSFAPDGPSLVEHLGAAAGEIDRLTGLSPQGRIELT 190 Query: 187 AGFLKHRVKANWKFILENECDGYHPAFVHTSIFGVADSMIGKLYGGASTALTRDYGNGHT 246 AG+L+H +ANWK + ENE DGYHP FVH SIFGV S IG LY +STA+TRD GNGH+ Sbjct: 191 AGWLQHLTRANWKLLAENETDGYHPQFVHGSIFGVTGSTIGPLYSDSSTAVTRDLGNGHS 250 Query: 247 EIDLRPEFRKRDAPMSWFGTSEDRLPDYTARMKAAHGDTAAREIMIDGTPHVMIFPNLFI 306 E DLRPEFRK PM WFGT+E R+P+Y M+ HG A R ++I+G PHVMIFPNLFI Sbjct: 251 ENDLRPEFRKFAQPMRWFGTTESRVPEYVKAMRQVHGAYADR-VLIEGAPHVMIFPNLFI 309 Query: 307 AEIQMFVIQPLGVDDSVQHVTALQFKGAPDLNRRLRQQTMGSVGPAGFLLADDSEMYERC 366 AEIQ+F IQP+ V++ VQ+ TA+Q GAP+LNRR+ Q +GSVGPAG LLADD+EMYER Sbjct: 310 AEIQVFNIQPVAVNECVQYSTAVQLAGAPELNRRMVSQCIGSVGPAGMLLADDTEMYERN 369 Query: 367 HRGVLARNPEWIFLGRGEKRERQDELGFTVGHVTDEVPSRGIWTHYRKLMEPN 419 G+ A +PEW+ + RG RE DE GFT+G TDE RG W+HY+ LM + Sbjct: 370 QEGLAALSPEWLDIRRGLNREAIDENGFTIGAATDETGMRGFWSHYQTLMSKD 422 >ref|ZP_06848099.1| possible benzoate 1,2-dioxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] gb|EFG78554.1| possible benzoate 1,2-dioxygenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 423 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 253/411 (61%), Positives = 315/411 (76%), Gaps = 2/411 (0%) Query: 7 ASPWERLIRPDRVHGSLYTDPEIFEAELKNIWYRTWVYVGHESEVPNANDYVVKSIGPQS 66 S +++LI+ D+VHGSLYTDP IF EL+ +WYR+WV+VGHESEV A DYV K +G Q Sbjct: 12 GSRYDQLIKRDKVHGSLYTDPTIFAEELRKVWYRSWVFVGHESEVSQAGDYVRKRLGLQD 71 Query: 67 VIMTRDEQGKVNLLLNRCSHRGNQVCSYERGNARSFTCPFHSWTFANDGRLVGYAFPDGY 126 VIMTRD G+++LLLNRC+HRGNQVC +GN+ +F CP+H WT+ NDG LVG+ F GY Sbjct: 72 VIMTRDRDGQLHLLLNRCAHRGNQVCDDAKGNSSTFRCPYHGWTYRNDGELVGFPFFKGY 131 Query: 127 EGQDKSQLALGRVTRVASYRGFVFGSFAADGPTLKEHLGGAAETIDRLVRTSPEGEVEIT 186 G+ K L +GRV R+ +YRGFVFGSFAADGP+L EHLG AA IDRLVR SP G+V++T Sbjct: 132 -GERKLDLPMGRVPRMDTYRGFVFGSFAADGPSLIEHLGAAAGEIDRLVRLSPVGKVQLT 190 Query: 187 AGFLKHRVKANWKFILENECDGYHPAFVHTSIFGVADSMIGKLYGGASTALTRDYGNGHT 246 AG+L+H+ +ANWK + ENE DGYHP FVH SIFGV S IG LY +STA+TRD GNGH+ Sbjct: 191 AGWLQHQTRANWKLLAENETDGYHPQFVHGSIFGVTGSPIGPLYSESSTAVTRDLGNGHS 250 Query: 247 EIDLRPEFRKRDAPMSWFGTSEDRLPDYTARMKAAHGDTAAREIMIDGTPHVMIFPNLFI 306 E DLRPEFRK P+ WFGTSEDR+P+Y A ++ +GD AA EI+I+G PHVMIFPNLFI Sbjct: 251 ENDLRPEFRKFAQPLRWFGTSEDRVPNYVAAIRKRYGD-AADEILIEGGPHVMIFPNLFI 309 Query: 307 AEIQMFVIQPLGVDDSVQHVTALQFKGAPDLNRRLRQQTMGSVGPAGFLLADDSEMYERC 366 AEIQ+F IQP+ V + +Q+ TA+Q GAP++N+R+ Q MGSVGPAG LLADD+EMYER Sbjct: 310 AEIQVFNIQPVSVGECIQYSTAVQLAGAPEMNKRMVSQCMGSVGPAGMLLADDTEMYERN 369 Query: 367 HRGVLARNPEWIFLGRGEKRERQDELGFTVGHVTDEVPSRGIWTHYRKLME 417 G+ PEW+ + RG RE DE GFT+G TDE RG W+HY++LME Sbjct: 370 QLGLENLTPEWLDVRRGLSRESVDENGFTIGGATDETGMRGFWSHYKRLME 420