BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0062.0019.p         (60 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_03508906.1| IS66 family insertion sequence transposase pr...    50   9e-05
ref|NP_659797.1| insertion sequence transposase protein [Rhizobi...    50   2e-04
ref|YP_001236787.1| transposase [Bradyrhizobium sp. BTAi1] >gi|1...    49   2e-04
gb|EGE60216.1| IS66 family insertion sequence transposase protei...    48   4e-04
ref|YP_779952.1| transposase IS66 [Rhodopseudomonas palustris Bi...    48   5e-04

>ref|ZP_03508906.1| IS66 family insertion sequence transposase protein [Rhizobium
          etli Brasil 5]
          Length = 534

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 2  LIEKLKLTIKKLRHEQFGQSSERRA-LLEQLELKLAKVEETAAQARAFADHVAA 54
          +I  LKL I KLR EQ+GQSSERRA L++Q+EL+L ++E  A +    A+ VAA
Sbjct: 42 MIRHLKLEIAKLRREQYGQSSERRARLIDQMELQLEELEADATEDEIAAERVAA 95


>ref|NP_659797.1| insertion sequence transposase protein [Rhizobium etli CFN 42]
 gb|AAM54811.1| probable insertion sequence transposase protein [Rhizobium etli
          CFN 42]
          Length = 207

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)

Query: 2  LIEKLKLTIKKLRHEQFGQSSERRA-LLEQLELKLAKVEETAAQARAFADHVAA 54
          +I  LKL I K+R EQ+GQSSERRA L+EQ+EL+L ++E  A +    A+ VA 
Sbjct: 42 MIRHLKLEIAKIRREQYGQSSERRARLIEQMELQLEELEADATEDEIAAERVAT 95


>ref|YP_001236787.1| transposase [Bradyrhizobium sp. BTAi1]
 ref|YP_001242183.1| transposase [Bradyrhizobium sp. BTAi1]
 gb|ABQ32881.1| transposase [Bradyrhizobium sp. BTAi1]
 gb|ABQ38277.1| transposase [Bradyrhizobium sp. BTAi1]
          Length = 527

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 1  LLIEKLKLTIKKLRHEQFGQSSER-RALLEQLELKLAKVEETAAQ 44
          L IE+LKL + K R EQFGQSSER R L+EQLEL +  +EET A+
Sbjct: 36 LEIERLKLMLAKARREQFGQSSERGRLLVEQLELAIEDLEETQAE 80


>gb|EGE60216.1| IS66 family insertion sequence transposase protein [Rhizobium
          etli CNPAF512]
          Length = 211

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 1/53 (1%)

Query: 2  LIEKLKLTIKKLRHEQFGQSSERRA-LLEQLELKLAKVEETAAQARAFADHVA 53
          +I  LKL I K+R EQ+GQSSERRA L+EQ++L+L ++E  A +    A+ VA
Sbjct: 42 MIRHLKLEIAKIRREQYGQSSERRARLIEQMKLQLQELEADATEDEIAAERVA 94


>ref|YP_779952.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 ref|YP_780066.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 ref|YP_781356.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 ref|YP_782426.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 ref|YP_782918.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 gb|ABJ04972.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05086.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 gb|ABJ06376.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07446.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07938.1| transposase IS66 [Rhodopseudomonas palustris BisA53]
          Length = 528

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 1  LLIEKLKLTIKKLRHEQFGQSSER-RALLEQLELKLAKVEETAAQ 44
          L IE+LKL + K R EQFGQSSER + L+EQLEL +  +EET A+
Sbjct: 38 LEIERLKLMLAKARREQFGQSSERGKLLIEQLELAIEDLEETQAE 82