BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0062.0002.p         (96 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001925788.1| helicase domain-containing protein [Methylob...   171   4e-41
ref|YP_115086.1| prophage LambdaMc01, SNF2 family helicase [Meth...   165   3e-39
ref|YP_002018956.1| helicase domain-containing protein [Pelodict...   163   7e-39
ref|YP_004302245.1| Prophage LambdaMc01, helicase, SNF2 family [...   160   5e-38
ref|ZP_03544985.1| helicase domain protein [Comamonas testostero...   160   6e-38

>ref|YP_001925788.1| helicase domain-containing protein [Methylobacterium populi BJ001]
 gb|ACB81253.1| helicase domain protein [Methylobacterium populi BJ001]
          Length = 922

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 80/85 (94%), Positives = 82/85 (96%)

Query: 1   VVFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHRAKVAAERRFCQKDGPRVLVCTAAGR 60
           V+FATYLGTVDMIAREIEQTFPGQGVVVLRGGDH AKVAAERRF QKDGPRVLVCTAAGR
Sbjct: 520 VIFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHGAKVAAERRFRQKDGPRVLVCTAAGR 579

Query: 61  EGINLQFARILFSFDLPWNPMDMEH 85
           EGINLQFARILF+FDLPWNPMDME 
Sbjct: 580 EGINLQFARILFNFDLPWNPMDMEQ 604


>ref|YP_115086.1| prophage LambdaMc01, SNF2 family helicase [Methylococcus capsulatus
           str. Bath]
 gb|AAU91285.1| prophage LambdaMc01, helicase, SNF2 family [Methylococcus
           capsulatus str. Bath]
          Length = 925

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 77/85 (90%), Positives = 81/85 (95%)

Query: 1   VVFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHRAKVAAERRFCQKDGPRVLVCTAAGR 60
           VVFATYLGTVD+IAREIEQ +PGQGVVVLRGGDH AKVAAERRF QKDGPRVLVCTAAGR
Sbjct: 522 VVFATYLGTVDLIAREIEQAYPGQGVVVLRGGDHGAKVAAERRFRQKDGPRVLVCTAAGR 581

Query: 61  EGINLQFARILFSFDLPWNPMDMEH 85
           EGINLQFARILF+FDLPWNPMD+E 
Sbjct: 582 EGINLQFARILFNFDLPWNPMDVEQ 606


>ref|YP_002018956.1| helicase domain-containing protein [Pelodictyon phaeoclathratiforme
           BU-1]
 gb|ACF44339.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 927

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 75/85 (88%), Positives = 81/85 (95%)

Query: 1   VVFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHRAKVAAERRFCQKDGPRVLVCTAAGR 60
           VVFATYLG+VD+IAREI QTFPGQGVV+LRGGDH AKVAAERRF QKDGPRVLVCTAAGR
Sbjct: 522 VVFATYLGSVDLIAREINQTFPGQGVVILRGGDHGAKVAAERRFRQKDGPRVLVCTAAGR 581

Query: 61  EGINLQFARILFSFDLPWNPMDMEH 85
           EGINLQF+RILF+FDLPWNPMD+E 
Sbjct: 582 EGINLQFSRILFNFDLPWNPMDVEQ 606


>ref|YP_004302245.1| Prophage LambdaMc01, helicase, SNF2 family [Polymorphum gilvum
           SL003B-26A1]
 gb|ADZ68949.1| Prophage LambdaMc01, helicase, SNF2 family [Polymorphum gilvum
           SL003B-26A1]
          Length = 922

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 74/85 (87%), Positives = 79/85 (92%)

Query: 1   VVFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHRAKVAAERRFCQKDGPRVLVCTAAGR 60
           V+FATYLGTVD++AREIE T+PGQGVVVLRGGDH AK AAERRF  KDGPRVLVCTAAGR
Sbjct: 523 VIFATYLGTVDLLAREIEATYPGQGVVVLRGGDHGAKAAAERRFKLKDGPRVLVCTAAGR 582

Query: 61  EGINLQFARILFSFDLPWNPMDMEH 85
           EGINLQFARILF+FDLPWNPMDME 
Sbjct: 583 EGINLQFARILFNFDLPWNPMDMEQ 607


>ref|ZP_03544985.1| helicase domain protein [Comamonas testosteroni KF-1]
 gb|EED69271.1| helicase domain protein [Comamonas testosteroni KF-1]
          Length = 929

 Score =  160 bits (405), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 73/85 (85%), Positives = 80/85 (94%)

Query: 1   VVFATYLGTVDMIAREIEQTFPGQGVVVLRGGDHRAKVAAERRFCQKDGPRVLVCTAAGR 60
           V+FATYLGTVD+IAREIEQ +PGQGVVVLRGGDH AK+AAER+F  KDGPRVLVCTAAGR
Sbjct: 526 VIFATYLGTVDLIAREIEQAYPGQGVVVLRGGDHGAKLAAERKFRLKDGPRVLVCTAAGR 585

Query: 61  EGINLQFARILFSFDLPWNPMDMEH 85
           EG+NLQFARILF+FDLPWNPMDME 
Sbjct: 586 EGLNLQFARILFNFDLPWNPMDMEQ 610