BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0061.0037.p (171 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237358.1| hypothetical protein BBta_1211 [Bradyrhizobi... 202 2e-50 ref|NP_774527.1| hypothetical protein blr7887 [Bradyrhizobium ja... 200 6e-50 ref|YP_001208261.1| hypothetical protein BRADO6423 [Bradyrhizobi... 199 1e-49 ref|YP_533647.1| colicin V production protein [Rhodopseudomonas ... 169 1e-40 ref|YP_782823.1| colicin V production protein [Rhodopseudomonas ... 158 2e-37 >ref|YP_001237358.1| hypothetical protein BBta_1211 [Bradyrhizobium sp. BTAi1] gb|ABQ33452.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 171 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 104/171 (60%), Positives = 129/171 (75%) Query: 1 MNLFDLAVILGLVFAVVTGFTTGLLRSAVTILAYLVAMPLAVAALAMIGPHIATLTSSPF 60 MN FDLA +GLV AV +GF+TGLLRSA+TILAYL+AMPLA+ A+A + P + + P Sbjct: 1 MNAFDLAACVGLVIAVYSGFSTGLLRSAITILAYLLAMPLAMGAVAAMSPQLRDVHGVPL 60 Query: 61 PPNGVLLFGLFLLIGVILGKMARTMLDDTIGSEIGIGDRLGGALLGAIRVGLVVTTLVLV 120 + F F++IGV LGK+ R +LD IGSE G GDRL GALLGA+RVG+V TTLVLV Sbjct: 61 AQGWLQFFAAFVVIGVALGKIGRILLDQAIGSEAGFGDRLAGALLGAVRVGMVATTLVLV 120 Query: 121 FDQLVPLARQPQFLNGSQLRPLFSAAGQAGFRSLPPEAAMAIERLRREQRI 171 FD++VP RQP+FL GS+LRPL S AG GFRSLPPE A I+RL++E+RI Sbjct: 121 FDKIVPPERQPRFLEGSRLRPLLSLAGAKGFRSLPPEVAGLIDRLKQERRI 171 >ref|NP_774527.1| hypothetical protein blr7887 [Bradyrhizobium japonicum USDA 110] dbj|BAC53152.1| blr7887 [Bradyrhizobium japonicum USDA 110] Length = 170 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 105/171 (61%), Positives = 131/171 (76%), Gaps = 1/171 (0%) Query: 1 MNLFDLAVILGLVFAVVTGFTTGLLRSAVTILAYLVAMPLAVAALAMIGPHIATLTSSPF 60 MN FDLAV L A+ GF TGLLRSA+TILAYL+A P+AVA + +I P +A+ ++P Sbjct: 1 MNSFDLAVYAALAIAIGFGFRTGLLRSAMTILAYLLAAPIAVALMPLIVPQVASNPNAPL 60 Query: 61 PPNGVLLFGLFLLIGVILGKMARTMLDDTIGSEIGIGDRLGGALLGAIRVGLVVTTLVLV 120 N + FG+FL++G++ G + R ++DT+ E GIGDRLGGA LGAIRVGLV TTLVLV Sbjct: 61 LQNWIWFFGIFLVVGMLFGHIGRLAVNDTV-REAGIGDRLGGAALGAIRVGLVATTLVLV 119 Query: 121 FDQLVPLARQPQFLNGSQLRPLFSAAGQAGFRSLPPEAAMAIERLRREQRI 171 FDQ+VP RQP FL GS LRPLFSAAGQ GF+SLPPEAA AI+RL++E+ I Sbjct: 120 FDQIVPANRQPPFLAGSHLRPLFSAAGQMGFKSLPPEAAAAIDRLKQERHI 170 >ref|YP_001208261.1| hypothetical protein BRADO6423 [Bradyrhizobium sp. ORS 278] emb|CAL80046.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 171 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/171 (59%), Positives = 129/171 (75%) Query: 1 MNLFDLAVILGLVFAVVTGFTTGLLRSAVTILAYLVAMPLAVAALAMIGPHIATLTSSPF 60 MN FDLA L+ AV +GF+TGLLRSA+TILAYL+AMPLA+ A+A + P + + +P Sbjct: 1 MNSFDLAACAALMIAVYSGFSTGLLRSAITILAYLLAMPLAMGAVAAMSPQLQDVHGAPL 60 Query: 61 PPNGVLLFGLFLLIGVILGKMARTMLDDTIGSEIGIGDRLGGALLGAIRVGLVVTTLVLV 120 N + F FL+IGV LGK+ R MLD+ IG + G GDRL GALLGA+RVG+V TLVLV Sbjct: 61 AQNWLQFFAAFLVIGVALGKVGRMMLDEAIGPDAGFGDRLAGALLGAVRVGMVAITLVLV 120 Query: 121 FDQLVPLARQPQFLNGSQLRPLFSAAGQAGFRSLPPEAAMAIERLRREQRI 171 FD++VP RQP+FL+GS+LRP+ S AG GFRSLPPE A I+RL++E+RI Sbjct: 121 FDRIVPPDRQPRFLDGSRLRPILSLAGAKGFRSLPPEVASLIDRLKQERRI 171 >ref|YP_533647.1| colicin V production protein [Rhodopseudomonas palustris BisB18] gb|ABD89328.1| Colicin V production protein [Rhodopseudomonas palustris BisB18] Length = 171 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/171 (51%), Positives = 115/171 (67%) Query: 1 MNLFDLAVILGLVFAVVTGFTTGLLRSAVTILAYLVAMPLAVAALAMIGPHIATLTSSPF 60 MN FD+ V GLV A+ GF GLLRSAVTIL Y+VAMP+A+ A+I P + + P Sbjct: 1 MNSFDVVVCFGLVIAMTFGFRAGLLRSAVTILGYVVAMPIALWITALIAPRLGGASDLPT 60 Query: 61 PPNGVLLFGLFLLIGVILGKMARTMLDDTIGSEIGIGDRLGGALLGAIRVGLVVTTLVLV 120 + FL+ G+ LG + RT +D+ G+ IG+ DRLGGA LGA RVGL+ T+VL+ Sbjct: 61 AQTSMAFVAAFLVSGIGLGALLRTAIDEMAGAHIGLTDRLGGAALGAARVGLIAITMVLI 120 Query: 121 FDQLVPLARQPQFLNGSQLRPLFSAAGQAGFRSLPPEAAMAIERLRREQRI 171 FD+L+P QP FL GSQLRPL SAAGQ GF+SLPP+ A I +L++ R+ Sbjct: 121 FDELIPANAQPTFLAGSQLRPLLSAAGQQGFKSLPPDVAAYIAQLKQSHRL 171 >ref|YP_782823.1| colicin V production protein [Rhodopseudomonas palustris BisA53] gb|ABJ07843.1| Colicin V production protein [Rhodopseudomonas palustris BisA53] Length = 171 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/171 (50%), Positives = 112/171 (65%) Query: 1 MNLFDLAVILGLVFAVVTGFTTGLLRSAVTILAYLVAMPLAVAALAMIGPHIATLTSSPF 60 MN FD + L AVV GF +GLLRSA TI YL+AMP+A+ + I P I T Sbjct: 1 MNSFDAVLYFALAAAVVLGFRSGLLRSAATIFGYLIAMPVALWVTSWIVPRIDTGPGLLP 60 Query: 61 PPNGVLLFGLFLLIGVILGKMARTMLDDTIGSEIGIGDRLGGALLGAIRVGLVVTTLVLV 120 N ++ FL+ G++LG + R+ +++ +G +IG DR GGA LGA+R+GLV T+VLV Sbjct: 61 GQNSLVFVAAFLVSGIVLGGLLRSAINEIVGDQIGAFDRFGGAALGAVRIGLVAVTVVLV 120 Query: 121 FDQLVPLARQPQFLNGSQLRPLFSAAGQAGFRSLPPEAAMAIERLRREQRI 171 FD L+P+ P FL GSQLRPL SAA Q G +SLPPEAA IERL+ QRI Sbjct: 121 FDALIPVHATPAFLVGSQLRPLLSAAAQRGVKSLPPEAASYIERLKLAQRI 171