BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0061.0024.p (390 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_532651.1| putative OpgC protein [Rhodopseudomonas palustr... 545 e-153 ref|YP_781831.1| putative OpgC protein [Rhodopseudomonas palustr... 538 e-151 ref|YP_004109245.1| hypothetical protein Rpdx1_2929 [Rhodopseudo... 526 e-147 ref|YP_001991790.1| hypothetical protein Rpal_2806 [Rhodopseudom... 524 e-146 ref|NP_947878.1| putative OpgC protein [Rhodopseudomonas palustr... 523 e-146 >ref|YP_532651.1| putative OpgC protein [Rhodopseudomonas palustris BisB18] gb|ABD88332.1| putative OpgC protein [Rhodopseudomonas palustris BisB18] Length = 415 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 258/371 (69%), Positives = 304/371 (81%) Query: 1 MDVKAVLPPRGRDYRLDLLRGFANWAIYLDHIPNNAVNWITQKNFGFSDAADLFVFISGY 60 M+++A LPP+GRD RLDL RG ANWAI+LDHIPNN VNWIT +N+GFSDAADLFVFISGY Sbjct: 1 MEIRATLPPKGRDLRLDLFRGVANWAIFLDHIPNNVVNWITTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGTVIGATRLIKRAWQIYVAHVLLFVIYIAEIGYLSQRYHDPNLQNEF 120 TASFVYA+MMLERG ++GATRL+KR WQ+YVAHV+LFVIYIA IGY++QRYHDP++ NEF Sbjct: 61 TASFVYAKMMLERGFLVGATRLMKRVWQLYVAHVILFVIYIAAIGYVAQRYHDPDIINEF 120 Query: 121 NVAGFMHNPAETLYQGLILAFKPVNMDVLPLYIALMLCYPLVLWAMLRKLNLTLLASFLL 180 NVAG + NP +TL QGL+L FKP+N+DVLPLYI LM +P VLW MLR+ NLT+L S L Sbjct: 121 NVAGLVDNPIQTLTQGLLLKFKPLNLDVLPLYIVLMGFFPPVLWLMLRRPNLTMLGSVAL 180 Query: 181 YLAARQFGWNLPAYPSGSWYFNPFCWQFLFVFGGWFALGGASESITFIRSRAFLWLGGAY 240 Y AAR FGWNL AYP GSWYFNP+ WQ LFVFG WFALGGA+ S I S L+ AY Sbjct: 181 YFAARYFGWNLVAYPVGSWYFNPYTWQLLFVFGAWFALGGATASRRLINSPITLYFCIAY 240 Query: 241 LLFALVMTLAGRFPELGQAMPAWLYDAFNPNDKTNLAPYRVLHFIVLAFFVTRFLPREWP 300 L+FALVMT+AGRFPE G PAWLYDAFNPNDKT LAPYRVLHF+VLAF V RF+P+EWP Sbjct: 241 LIFALVMTMAGRFPEFGAMFPAWLYDAFNPNDKTFLAPYRVLHFVVLAFMVVRFVPKEWP 300 Query: 301 GYEWPVFQPILKCGQQSLEVFCTGVFLAVIAHVVLVEVSGSIWMQIAVSIVGIVLMTALA 360 G EWP+FQP++KCGQQSL VFC GVFL+ +AH L+ SGS+ QI VS+ G+ ++ +A Sbjct: 301 GLEWPIFQPLIKCGQQSLAVFCVGVFLSFVAHFELMMSSGSLLAQIFVSVTGLAILCLVA 360 Query: 361 YYRSWSKKVEK 371 YY WSKK +K Sbjct: 361 YYIGWSKKQDK 371 >ref|YP_781831.1| putative OpgC protein [Rhodopseudomonas palustris BisA53] gb|ABJ06851.1| putative OpgC protein [Rhodopseudomonas palustris BisA53] Length = 417 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 249/371 (67%), Positives = 303/371 (81%) Query: 1 MDVKAVLPPRGRDYRLDLLRGFANWAIYLDHIPNNAVNWITQKNFGFSDAADLFVFISGY 60 MD+ A LPP+GRD RLDL RG ANWAI+LDHIP+N VNW+T +N+GFSDAADLFVFISGY Sbjct: 1 MDIHATLPPKGRDLRLDLFRGLANWAIFLDHIPDNVVNWVTTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGTVIGATRLIKRAWQIYVAHVLLFVIYIAEIGYLSQRYHDPNLQNEF 120 TASFVYA+MMLERG ++G TRL KR WQ+YVAHV+LFVIYIA IGY++QR++DP++ +EF Sbjct: 61 TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHVMLFVIYIAAIGYVAQRFYDPDIISEF 120 Query: 121 NVAGFMHNPAETLYQGLILAFKPVNMDVLPLYIALMLCYPLVLWAMLRKLNLTLLASFLL 180 NVAG + +P +TL QGL+L FKP+N+DVLPLYI LM +P VLW MLR+ NL +LAS L Sbjct: 121 NVAGLVESPIQTLTQGLLLKFKPLNLDVLPLYIVLMAFFPPVLWLMLRRPNLVMLASVAL 180 Query: 181 YLAARQFGWNLPAYPSGSWYFNPFCWQFLFVFGGWFALGGASESITFIRSRAFLWLGGAY 240 Y AAR FGWNL A+P+G WYFNPF WQ LF+FG WFALGGA+ S I S L+ G AY Sbjct: 181 YFAARYFGWNLTAFPTGQWYFNPFTWQVLFMFGAWFALGGANTSRRLINSSFTLYFGLAY 240 Query: 241 LLFALVMTLAGRFPELGQAMPAWLYDAFNPNDKTNLAPYRVLHFIVLAFFVTRFLPREWP 300 LLFALVMT+AGRFP G+ P+WLYDAFNPNDKT LAPYRVLHF+V+ F V RFLP+EWP Sbjct: 241 LLFALVMTMAGRFPAFGELFPSWLYDAFNPNDKTFLAPYRVLHFLVITFLVVRFLPKEWP 300 Query: 301 GYEWPVFQPILKCGQQSLEVFCTGVFLAVIAHVVLVEVSGSIWMQIAVSIVGIVLMTALA 360 G EWP+F+P++KCGQQSL VFC GVFL+ +AH VL+ SGS+ Q+ VS+ GI ++ +A Sbjct: 301 GLEWPIFRPLIKCGQQSLAVFCVGVFLSFVAHFVLMMSSGSLAAQVLVSVAGIAILCGVA 360 Query: 361 YYRSWSKKVEK 371 YY SWSK+ +K Sbjct: 361 YYISWSKQQDK 371 >ref|YP_004109245.1| hypothetical protein Rpdx1_2929 [Rhodopseudomonas palustris DX-1] gb|ADU44512.1| conserved hypothetical protein [Rhodopseudomonas palustris DX-1] Length = 429 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 247/370 (66%), Positives = 292/370 (78%) Query: 1 MDVKAVLPPRGRDYRLDLLRGFANWAIYLDHIPNNAVNWITQKNFGFSDAADLFVFISGY 60 M+++A+LP +GRD RLDL RG ANWAIYLDHIPNN VNWIT +N+GFSDAADLFVFISGY Sbjct: 1 MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGTVIGATRLIKRAWQIYVAHVLLFVIYIAEIGYLSQRYHDPNLQNEF 120 TASFVYA+MMLERG ++G TRL KR WQ+YVAH++LFVIYI IGY++QR+ DP + NEF Sbjct: 61 TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEF 120 Query: 121 NVAGFMHNPAETLYQGLILAFKPVNMDVLPLYIALMLCYPLVLWAMLRKLNLTLLASFLL 180 NVAG + NP ETL QGL+L FKPVN+DVLPLYI LM +P VLW MLRK + ++ SF+L Sbjct: 121 NVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRKPDAVMIGSFVL 180 Query: 181 YLAARQFGWNLPAYPSGSWYFNPFCWQFLFVFGGWFALGGASESITFIRSRAFLWLGGAY 240 Y AAR F WNL A+P G+WYFNPFCWQ LFVFG W ALGG S + I SR LW AY Sbjct: 181 YFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIDSRGMLWFCLAY 240 Query: 241 LLFALVMTLAGRFPELGQAMPAWLYDAFNPNDKTNLAPYRVLHFIVLAFFVTRFLPREWP 300 L+FALVMT+AGRF + G+ PAWLY AFNPNDKTNLAPYR LHF V+ V RF+P++W Sbjct: 241 LVFALVMTMAGRFQDFGELFPAWLYGAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWS 300 Query: 301 GYEWPVFQPILKCGQQSLEVFCTGVFLAVIAHVVLVEVSGSIWMQIAVSIVGIVLMTALA 360 G EW VF P++KCGQQSL VFC GVFL+ +AH L SGS+ QI VS+VGI LMT +A Sbjct: 301 GLEWRVFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLLAQILVSVVGIALMTVVA 360 Query: 361 YYRSWSKKVE 370 YY SWSK+ + Sbjct: 361 YYISWSKQQD 370 >ref|YP_001991790.1| hypothetical protein Rpal_2806 [Rhodopseudomonas palustris TIE-1] gb|ACF01315.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 424 Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust. Identities = 248/375 (66%), Positives = 294/375 (78%), Gaps = 1/375 (0%) Query: 1 MDVKAVLPPRGRDYRLDLLRGFANWAIYLDHIPNNAVNWITQKNFGFSDAADLFVFISGY 60 M+++A+LP +GRD RLDL RG ANWAIYLDHIPNN VNWIT +N+GFSDAADLFVFISGY Sbjct: 1 MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGTVIGATRLIKRAWQIYVAHVLLFVIYIAEIGYLSQRYHDPNLQNEF 120 TASFVYA+MMLERG ++G TRL KR WQ+YVAH++LFVIYI IGY++QR+ DP + NEF Sbjct: 61 TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEF 120 Query: 121 NVAGFMHNPAETLYQGLILAFKPVNMDVLPLYIALMLCYPLVLWAMLRKLNLTLLASFLL 180 NVAG + NP ETL QGL+L FKPVN+DVLPLYI LM +P VLW MLR+ + ++ SF+L Sbjct: 121 NVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRRPDAVMIGSFVL 180 Query: 181 YLAARQFGWNLPAYPSGSWYFNPFCWQFLFVFGGWFALGGASESITFIRSRAFLWLGGAY 240 Y AAR F WNL A+P G+WYFNPFCWQ LFVFG W ALGG S + I SR LW AY Sbjct: 181 YFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY 240 Query: 241 LLFALVMTLAGRFPELGQAMPAWLYDAFNPNDKTNLAPYRVLHFIVLAFFVTRFLPREWP 300 L+FALVMT+AGRF E G P WLYDAFNPNDKTNLAPYR LHF V+ V RF+P++W Sbjct: 241 LVFALVMTMAGRFQEFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWK 300 Query: 301 GYEWPVFQPILKCGQQSLEVFCTGVFLAVIAHVVLVEVSGSIWMQIAVSIVGIVLMTALA 360 G EW F P++KCGQQSL VFC GVFL+ +AH L SGS+ QI VS++GI LMT +A Sbjct: 301 GLEWRGFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVA 360 Query: 361 YYRSWSKKVEKAPAK 375 YY SWSK+ +K PA+ Sbjct: 361 YYISWSKQQDK-PAR 374 >ref|NP_947878.1| putative OpgC protein [Rhodopseudomonas palustris CGA009] emb|CAE27977.1| putative opgC protein [Rhodopseudomonas palustris CGA009] Length = 424 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 247/375 (65%), Positives = 294/375 (78%), Gaps = 1/375 (0%) Query: 1 MDVKAVLPPRGRDYRLDLLRGFANWAIYLDHIPNNAVNWITQKNFGFSDAADLFVFISGY 60 M+++A+LP +GRD RLDL RG ANWAIYLDHIPNN VNWIT +N+GFSDAADLFVFISGY Sbjct: 1 MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGTVIGATRLIKRAWQIYVAHVLLFVIYIAEIGYLSQRYHDPNLQNEF 120 TASFVYA+MMLERG ++G TRL KR WQ+YVAH++LFVIYI IGY++QR+ DP + NEF Sbjct: 61 TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEF 120 Query: 121 NVAGFMHNPAETLYQGLILAFKPVNMDVLPLYIALMLCYPLVLWAMLRKLNLTLLASFLL 180 NVAG + NP ETL QGL+L FKPVN+DVLPLYI LM +P VLW MLR+ + ++ SF+L Sbjct: 121 NVAGLVANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRRPDAVMIGSFVL 180 Query: 181 YLAARQFGWNLPAYPSGSWYFNPFCWQFLFVFGGWFALGGASESITFIRSRAFLWLGGAY 240 Y AAR F WNL A+P G+WYFNPFCWQ LFVFG W ALGG S + I SR LW AY Sbjct: 181 YFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY 240 Query: 241 LLFALVMTLAGRFPELGQAMPAWLYDAFNPNDKTNLAPYRVLHFIVLAFFVTRFLPREWP 300 L+FALVMT+AGRF + G P WLYDAFNPNDKTNLAPYR LHF V+ V RF+P++W Sbjct: 241 LVFALVMTMAGRFQDFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWK 300 Query: 301 GYEWPVFQPILKCGQQSLEVFCTGVFLAVIAHVVLVEVSGSIWMQIAVSIVGIVLMTALA 360 G EW F P++KCGQQSL VFC GVFL+ +AH L SGS+ QI VS++GI LMT +A Sbjct: 301 GLEWRGFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVA 360 Query: 361 YYRSWSKKVEKAPAK 375 YY SWSK+ +K PA+ Sbjct: 361 YYISWSKQQDK-PAR 374