BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0061.0015.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774418.1| hypothetical protein bll7778 [Bradyrhizobium ja... 442 e-122 ref|YP_001237475.1| hypothetical protein BBta_1332 [Bradyrhizobi... 405 e-111 ref|YP_570749.1| hypothetical protein RPD_3625 [Rhodopseudomonas... 403 e-110 ref|YP_001208131.1| hypothetical protein BRADO6278 [Bradyrhizobi... 389 e-106 ref|YP_485292.1| hypothetical protein RPB_1673 [Rhodopseudomonas... 388 e-106 >ref|NP_774418.1| hypothetical protein bll7778 [Bradyrhizobium japonicum USDA 110] dbj|BAC53043.1| bll7778 [Bradyrhizobium japonicum USDA 110] Length = 381 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 213/284 (75%), Positives = 245/284 (86%) Query: 1 VFGGDGASFAVAPADLDKAREALAATARWVHDDLDLVLRVALVPMAAIRAAGADVRVARF 60 VFGGDGASFAVAP DLD+AR+ALAATA WV +DLDL +RVALVP++AIRA G DVRVARF Sbjct: 78 VFGGDGASFAVAPGDLDRARDALAATATWVREDLDLTMRVALVPVSAIRAQGLDVRVARF 137 Query: 61 GPSANLSYAMFSGGGLAYADAAMKRGAFAVDPAPQGTQPDLSGLSCRFEVMPSARGVILS 120 GPSANLSYAMFSGGGLA+ADAAMKRG FAV AP TQPDLSGLSCRFEV+P++RG+ILS Sbjct: 138 GPSANLSYAMFSGGGLAWADAAMKRGEFAVAEAPASTQPDLSGLSCRFEVIPASRGLILS 197 Query: 121 VLVLPAKNADPASFRKVIEDIVVRIEKSPDAGRPVPASGPPLHWPPQGMEYEARARRGGP 180 VLV+PA+ ADP +FRKVIEDI+ +E+SPD RPVP GPPL WPPQG++YEAR +RGGP Sbjct: 198 VLVMPARGADPPAFRKVIEDIIHLVERSPDGARPVPPQGPPLKWPPQGLDYEARTKRGGP 257 Query: 181 LALRRATVLAFTLWAYTLMRFNIPVGKFAPKRYLQQVVENSDFRKFDDGLRMILDCTPEL 240 L RRA VLA+TL+AY +MRF+I VG F P Y +QVVENSDFRK+DDGLRMILDCTPEL Sbjct: 258 LLARRAGVLAYTLFAYLIMRFDIKVGGFVPNLYKRQVVENSDFRKYDDGLRMILDCTPEL 317 Query: 241 AADIEQRLAAAAAQGIVRYGLHEQDAAMMTCFTPSVMRADHVHF 284 + RLAAAA +G+VRYGL+ QDAAMMTCFTPS +R+DHVHF Sbjct: 318 ERALSDRLAAAAREGVVRYGLYPQDAAMMTCFTPSALRSDHVHF 361 >ref|YP_001237475.1| hypothetical protein BBta_1332 [Bradyrhizobium sp. BTAi1] gb|ABQ33569.1| hypothetical protein BBta_1332 [Bradyrhizobium sp. BTAi1] Length = 383 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 205/284 (72%), Positives = 235/284 (82%) Query: 1 VFGGDGASFAVAPADLDKAREALAATARWVHDDLDLVLRVALVPMAAIRAAGADVRVARF 60 VFGGDGASFAV PAD+ AREALAATA WV +DL L +R+ALVP+ IRA G+DV VAR+ Sbjct: 80 VFGGDGASFAVGPADVTAAREALAATATWVREDLGLSMRIALVPVREIRAQGSDVSVARY 139 Query: 61 GPSANLSYAMFSGGGLAYADAAMKRGAFAVDPAPQGTQPDLSGLSCRFEVMPSARGVILS 120 GPSANLSYAMF+GGGL +A+AAMKRGAFAV PAP GTQPDLSGLSCRFE+MPS+RG+ILS Sbjct: 140 GPSANLSYAMFAGGGLGWAEAAMKRGAFAVTPAPPGTQPDLSGLSCRFELMPSSRGLILS 199 Query: 121 VLVLPAKNADPASFRKVIEDIVVRIEKSPDAGRPVPASGPPLHWPPQGMEYEARARRGGP 180 VLVLPA AD ++RKVIEDI+ E+SPDAGRPVPA GP L WPPQG+ YE RA RGGP Sbjct: 200 VLVLPAAGADTQAYRKVIEDIIALTERSPDAGRPVPAGGPVLQWPPQGLGYEVRAARGGP 259 Query: 181 LALRRATVLAFTLWAYTLMRFNIPVGKFAPKRYLQQVVENSDFRKFDDGLRMILDCTPEL 240 L R V+ TL+ Y ++RF I +G F P+ Y QQVVENSDFRK+DD LRMILDCT EL Sbjct: 260 LFARWVRVIGRTLFVYAVIRFGISIGGFVPRLYTQQVVENSDFRKYDDALRMILDCTEEL 319 Query: 241 AADIEQRLAAAAAQGIVRYGLHEQDAAMMTCFTPSVMRADHVHF 284 A ++E+RL+ AAAQGIVRYGLH QDAAMMTCFTPS +R DHVHF Sbjct: 320 AQELERRLSDAAAQGIVRYGLHRQDAAMMTCFTPSAIRPDHVHF 363 >ref|YP_570749.1| hypothetical protein RPD_3625 [Rhodopseudomonas palustris BisB5] gb|ABE40848.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 383 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 200/284 (70%), Positives = 234/284 (82%) Query: 1 VFGGDGASFAVAPADLDKAREALAATARWVHDDLDLVLRVALVPMAAIRAAGADVRVARF 60 VFGGDGASFAV P DLD+AREAL+A A WV D+LDL +R+ALVP+A IRA G DVRVARF Sbjct: 80 VFGGDGASFAVGPDDLDRAREALSAAAAWVRDELDLTMRIALVPVAVIRAQGLDVRVARF 139 Query: 61 GPSANLSYAMFSGGGLAYADAAMKRGAFAVDPAPQGTQPDLSGLSCRFEVMPSARGVILS 120 PS ++SYAMFSGGGL +A+AA+KRG FAV P P G PDL+GLSCRFE +PSA+GVILS Sbjct: 140 APSPHVSYAMFSGGGLGWAEAALKRGEFAVAPGPPGATPDLTGLSCRFEEIPSAQGVILS 199 Query: 121 VLVLPAKNADPASFRKVIEDIVVRIEKSPDAGRPVPASGPPLHWPPQGMEYEARARRGGP 180 VL++PA NADPA+FR +IE+ V R E+SPDAGRPVP+ GP L WPP G + EARA RGGP Sbjct: 200 VLIMPAANADPAAFRSLIEEAVARTERSPDAGRPVPSQGPGLRWPPAGFDLEARATRGGP 259 Query: 181 LALRRATVLAFTLWAYTLMRFNIPVGKFAPKRYLQQVVENSDFRKFDDGLRMILDCTPEL 240 L +RR VL +TL+AY +MRF I VG FAP+ Y+ QVVENSDFRK+DDGLRMILDCTPEL Sbjct: 260 LIMRRVFVLLYTLFAYLIMRFGIKVGGFAPQTYVAQVVENSDFRKYDDGLRMILDCTPEL 319 Query: 241 AADIEQRLAAAAAQGIVRYGLHEQDAAMMTCFTPSVMRADHVHF 284 A +EQ L AA++ G+ RYGL QDAAMMTCFTPS MR+DHVHF Sbjct: 320 ADALEQLLVAASSAGVARYGLFRQDAAMMTCFTPSAMRSDHVHF 363 >ref|YP_001208131.1| hypothetical protein BRADO6278 [Bradyrhizobium sp. ORS 278] emb|CAL79916.1| conserved hypothetical protein; putative coiled-coil domain [Bradyrhizobium sp. ORS 278] Length = 382 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/284 (70%), Positives = 231/284 (81%), Gaps = 1/284 (0%) Query: 1 VFGGDGASFAVAPADLDKAREALAATARWVHDDLDLVLRVALVPMAAIRAAGADVRVARF 60 VFGGDGASFAV P D AREALAATARWV +DL+L +RVALVP+ AIRAAG DVRVAR+ Sbjct: 80 VFGGDGASFAVGPDDAAAAREALAATARWVSEDLELSMRVALVPVGAIRAAGHDVRVARY 139 Query: 61 GPSANLSYAMFSGGGLAYADAAMKRGAFAVDPAPQGTQPDLSGLSCRFEVMPSARGVILS 120 GPSANLSYAMF+GGGL +A+AAMKRG FA+ PAP GT PDLSGLSCRFE MPSARG+ILS Sbjct: 140 GPSANLSYAMFAGGGLGWAEAAMKRGEFAIAPAPPGTLPDLSGLSCRFEEMPSARGLILS 199 Query: 121 VLVLPAKNADPASFRKVIEDIVVRIEKSPDAGRPVPASGPPLHWPPQGMEYEARARRGGP 180 VLVLPA ADP ++R+VIEDI+ E+SP+AGRPVP GP L WPPQG+ YE RA R GP Sbjct: 200 VLVLPAVGADPQAYRRVIEDIITLTERSPEAGRPVPPGGPALQWPPQGLGYEVRASR-GP 258 Query: 181 LALRRATVLAFTLWAYTLMRFNIPVGKFAPKRYLQQVVENSDFRKFDDGLRMILDCTPEL 240 +R VL TL+ Y +MRF I +G F P Y QQVVENSDFRK+DD LRMILDCT +L Sbjct: 259 GIVRWVRVLGRTLFVYAIMRFGISIGGFVPDLYRQQVVENSDFRKYDDALRMILDCTEQL 318 Query: 241 AADIEQRLAAAAAQGIVRYGLHEQDAAMMTCFTPSVMRADHVHF 284 A ++E+RL AAA+QGIVR+GLH Q +AMMTCFTPS +R DHVHF Sbjct: 319 AQELERRLGAAASQGIVRHGLHRQASAMMTCFTPSAIRPDHVHF 362 >ref|YP_485292.1| hypothetical protein RPB_1673 [Rhodopseudomonas palustris HaA2] gb|ABD06381.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 383 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 197/284 (69%), Positives = 233/284 (82%) Query: 1 VFGGDGASFAVAPADLDKAREALAATARWVHDDLDLVLRVALVPMAAIRAAGADVRVARF 60 VFGGDGASFAVAP DL REA+AA+A WV D+L+L +R+ALVP+AA+R G DVRVARF Sbjct: 80 VFGGDGASFAVAPGDLAGVREAMAASAAWVRDELELTMRIALVPVAAVREKGLDVRVARF 139 Query: 61 GPSANLSYAMFSGGGLAYADAAMKRGAFAVDPAPQGTQPDLSGLSCRFEVMPSARGVILS 120 PSAN+SYAMFSGGGLA+A+AAMKRG FAV PAP GT PDL+GLSCRFE +PS +GVILS Sbjct: 140 APSANVSYAMFSGGGLAWAEAAMKRGEFAVPPAPPGTTPDLTGLSCRFEEIPSVQGVILS 199 Query: 121 VLVLPAKNADPASFRKVIEDIVVRIEKSPDAGRPVPASGPPLHWPPQGMEYEARARRGGP 180 VL++PA ADPA+FR++IE+ V R E+SPDAGRPVP+ GP L WPP G + EARA RGGP Sbjct: 200 VLIVPAAGADPAAFRRLIEEAVARTERSPDAGRPVPSHGPALRWPPAGFDLEARAARGGP 259 Query: 181 LALRRATVLAFTLWAYTLMRFNIPVGKFAPKRYLQQVVENSDFRKFDDGLRMILDCTPEL 240 L RR VL +TL+ Y +MR I VG F P+ Y+ +VVENSDFRK+DDGLRMILDCTPEL Sbjct: 260 LIKRRIVVLLYTLFVYVVMRLRISVGGFVPRTYIAEVVENSDFRKYDDGLRMILDCTPEL 319 Query: 241 AADIEQRLAAAAAQGIVRYGLHEQDAAMMTCFTPSVMRADHVHF 284 A +EQ LAAAA+ G+ RYGL Q+AAMMTCFTPS+ R+DHVHF Sbjct: 320 ADALEQLLAAAASAGVARYGLFRQEAAMMTCFTPSLTRSDHVHF 363