BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0061.0013.p (461 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774416.1| cation efflux system protein [Bradyrhizobium ja... 629 e-178 ref|YP_570747.1| MATE efflux family protein [Rhodopseudomonas pa... 588 e-166 ref|YP_782750.1| MATE efflux family protein [Rhodopseudomonas pa... 577 e-162 ref|NP_947037.1| cation efflux pump [Rhodopseudomonas palustris ... 572 e-161 ref|YP_485294.1| MATE efflux family protein [Rhodopseudomonas pa... 568 e-160 >ref|NP_774416.1| cation efflux system protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53041.1| blr7776 [Bradyrhizobium japonicum USDA 110] Length = 463 Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust. Identities = 349/461 (75%), Positives = 384/461 (83%), Gaps = 1/461 (0%) Query: 1 MTIEASIDDASPTAAAPAVPVNDLLTAPILPTLLRLAIPNTIAMFGSTLVAVAETSYIGR 60 MTI+A ID A P A A P+ LLTAPILP LLRLAIPN IAM GSTLVA+AETSYIGR Sbjct: 3 MTIDAPIDAAPPRAPV-ASPIASLLTAPILPMLLRLAIPNMIAMVGSTLVAIAETSYIGR 61 Query: 61 LGTEPLAGIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDRDRAADLALHAAIIGGC 120 LGT PLA IALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDRDRAA LALHAAIIG C Sbjct: 62 LGTIPLAAIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDRDRAATLALHAAIIGLC 121 Query: 121 AGLFFTVMMLGFGRNFYALLGGHGGVLEQSMHYSQVLFSGAISIWLVNTLASVVRGTGDM 180 GLFFTV ML FGR+F+ LLGG VLE++ YSQVLFSGA++IWLVNTLASV+RGTGDM Sbjct: 122 GGLFFTVTMLVFGRSFFTLLGGRERVLEEACGYSQVLFSGAVAIWLVNTLASVIRGTGDM 181 Query: 181 RIPSMTLITVSMIQIAVGGVLGLGLFGMPGLGMRGVAAGQLTAFTCGAIFLAWYLASGRS 240 R+PSMTLI S++QIA+GG LGLGLFG+ GM GVAAGQL AFTC A+F WYL SGRS Sbjct: 182 RLPSMTLIGASVLQIALGGTLGLGLFGVKQFGMPGVAAGQLIAFTCAAVFFLWYLLSGRS 241 Query: 241 RLKLDFAAFSFQRAMFLDILKVGAISCLSPLQSVLTILIFTKILASFGTETLAGYGMGSR 300 RL LDF AF F+RAMFLDILKVGA++CLSPLQ+VLTILIFT+ILA+FGTE LAGYG+GSR Sbjct: 242 RLPLDFRAFYFERAMFLDILKVGAVACLSPLQTVLTILIFTRILATFGTEMLAGYGIGSR 301 Query: 301 LEFLLIPIAFAVGVASVPMVGMAIGAGLVTRARKVAWTAGTVAGLVVGLVGLVVAFKPTL 360 LEFLLIPI FA G+ASVPMVGMAIGAG V RAR+VAWTA + L VGL+GLV+A P L Sbjct: 302 LEFLLIPITFAFGIASVPMVGMAIGAGQVKRARRVAWTAAAASALTVGLIGLVIALDPAL 361 Query: 361 WIALFTTDPGVTAAASSYFALAGPGFGFFGVGVCLYFSSQGAAKVGGPVLAGTIRLLLVG 420 W +LFT DPGVTAAA SYF AGP F FFG+GV LYFSSQGAA+VGGPVLA T RLL+V Sbjct: 362 WASLFTADPGVTAAAHSYFHWAGPAFAFFGMGVSLYFSSQGAARVGGPVLASTARLLIVA 421 Query: 421 IGGWWLATVSAPAWTLFALVGAAMVAFGLATIISIRLTRWG 461 IGG L APAWTLFALVG AMV FGL+T +S+ RWG Sbjct: 422 IGGGVLMMAQAPAWTLFALVGGAMVVFGLSTAVSVAFARWG 462 >ref|YP_570747.1| MATE efflux family protein [Rhodopseudomonas palustris BisB5] gb|ABE40846.1| MATE efflux family protein [Rhodopseudomonas palustris BisB5] Length = 457 Score = 588 bits (1515), Expect = e-166, Method: Compositional matrix adjust. Identities = 325/460 (70%), Positives = 381/460 (82%), Gaps = 5/460 (1%) Query: 1 MTIEASIDDASPTAAAPAVPVNDLLTAPILPTLLRLAIPNTIAMFGSTLVAVAETSYIGR 60 MTI+A D P A+A N LLTAPILPTL+RLAIPN IAM G+ +V VAETSYIGR Sbjct: 1 MTIDAPADTPLPAASA-----NRLLTAPILPTLIRLAIPNVIAMVGTAVVTVAETSYIGR 55 Query: 61 LGTEPLAGIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDRDRAADLALHAAIIGGC 120 LGTEPLA IALVFPFAMLTQMMSAGAMGGGVSS++SRALGAGDR RA LALHA +IG C Sbjct: 56 LGTEPLAAIALVFPFAMLTQMMSAGAMGGGVSSSVSRALGAGDRTRAEVLALHAILIGVC 115 Query: 121 AGLFFTVMMLGFGRNFYALLGGHGGVLEQSMHYSQVLFSGAISIWLVNTLASVVRGTGDM 180 GL FT++ML FGR+ ++LLGG G VLEQ+ YS VLFSGA+SIWLVNTLASV+RGTGDM Sbjct: 116 GGLVFTLIMLVFGRSLFSLLGGRGEVLEQACSYSVVLFSGAVSIWLVNTLASVLRGTGDM 175 Query: 181 RIPSMTLITVSMIQIAVGGVLGLGLFGMPGLGMRGVAAGQLTAFTCGAIFLAWYLASGRS 240 +P+ TL+ V+ +QI +GG GLGLFG+P LGM GVA+GQL AF+ GA+FL Y+ASGR Sbjct: 176 ILPAATLLAVAALQIVIGGTFGLGLFGLPRLGMGGVASGQLIAFSLGAVFLLLYMASGRG 235 Query: 241 RLKLDFAAFSFQRAMFLDILKVGAISCLSPLQSVLTILIFTKILASFGTETLAGYGMGSR 300 RL+L +F+FQR MF+DILKVGA++CL+PLQSVLTILIFTKILA+FGT TLAGYG+GSR Sbjct: 236 RLRLRVKSFAFQREMFIDILKVGAMACLAPLQSVLTILIFTKILATFGTATLAGYGIGSR 295 Query: 301 LEFLLIPIAFAVGVASVPMVGMAIGAGLVTRARKVAWTAGTVAGLVVGLVGLVVAFKPTL 360 LEFLLIPIAFA GVAS+PMVGMA+GAG++ RAR+VAWTAG V+ L++GLVG+ +A +P+L Sbjct: 296 LEFLLIPIAFAFGVASIPMVGMAVGAGMIARARRVAWTAGAVSALIIGLVGVALAIQPSL 355 Query: 361 WIALFTTDPGVTAAASSYFALAGPGFGFFGVGVCLYFSSQGAAKVGGPVLAGTIRLLLVG 420 W++LFT+DP V AAA SYF AGPGF FFG+GV LYF+SQGAAKVGGPVLA T RLLLV Sbjct: 356 WVSLFTSDPAVAAAAHSYFGWAGPGFAFFGLGVTLYFASQGAAKVGGPVLAATARLLLVA 415 Query: 421 IGGWWLATVSAPAWTLFALVGAAMVAFGLATIISIRLTRW 460 +GG L APA LFALVGAAMV +GL T +I LTRW Sbjct: 416 VGGTALVAADAPASALFALVGAAMVVYGLGTAGAIWLTRW 455 >ref|YP_782750.1| MATE efflux family protein [Rhodopseudomonas palustris BisA53] gb|ABJ07770.1| MATE efflux family protein [Rhodopseudomonas palustris BisA53] Length = 457 Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust. Identities = 319/443 (72%), Positives = 370/443 (83%) Query: 19 VPVNDLLTAPILPTLLRLAIPNTIAMFGSTLVAVAETSYIGRLGTEPLAGIALVFPFAML 78 VP + LL+APILPTLLRLA+PN IAM G+ L+A+ ETSYIGRLG PLAGIALVFPFAML Sbjct: 14 VPAHGLLSAPILPTLLRLAVPNAIAMVGTALIAITETSYIGRLGLAPLAGIALVFPFAML 73 Query: 79 TQMMSAGAMGGGVSSAISRALGAGDRDRAADLALHAAIIGGCAGLFFTVMMLGFGRNFYA 138 TQMMSAGAMGGGVSSAISR +GAGD DRAA LALHAA+IG GL FTV+ML FGR YA Sbjct: 74 TQMMSAGAMGGGVSSAISRTVGAGDHDRAATLALHAALIGVGGGLLFTVLMLSFGRQVYA 133 Query: 139 LLGGHGGVLEQSMHYSQVLFSGAISIWLVNTLASVVRGTGDMRIPSMTLITVSMIQIAVG 198 LLGG G VLEQ+ YS VLF+GA +IW+VNTLASV+RGTG+M++P+M ++ +++QI VG Sbjct: 134 LLGGRGEVLEQACAYSNVLFAGATAIWMVNTLASVLRGTGEMKLPAMAILGAALVQIVVG 193 Query: 199 GVLGLGLFGMPGLGMRGVAAGQLTAFTCGAIFLAWYLASGRSRLKLDFAAFSFQRAMFLD 258 GVLGLGLFG P LGM GVA+GQ+ F+C +FL WYL SGRSRL F+AF F+RAMF+D Sbjct: 194 GVLGLGLFGAPRLGMAGVASGQVVGFSCAMLFLLWYLISGRSRLTFAFSAFRFRRAMFVD 253 Query: 259 ILKVGAISCLSPLQSVLTILIFTKILASFGTETLAGYGMGSRLEFLLIPIAFAVGVASVP 318 ILKVGA++CLSPLQ+VLTILIFTK+LA FG E LAGYG+GSRLEFLLIPIAFA GVASVP Sbjct: 254 ILKVGAVACLSPLQTVLTILIFTKLLAGFGNEVLAGYGIGSRLEFLLIPIAFAFGVASVP 313 Query: 319 MVGMAIGAGLVTRARKVAWTAGTVAGLVVGLVGLVVAFKPTLWIALFTTDPGVTAAASSY 378 MVGMAIGAG + RAR+VAWTAG + L VG VG++VA KP LW++LFTTD V AAASSY Sbjct: 314 MVGMAIGAGDIARARRVAWTAGAASALSVGAVGVLVALKPALWVSLFTTDAAVVAAASSY 373 Query: 379 FALAGPGFGFFGVGVCLYFSSQGAAKVGGPVLAGTIRLLLVGIGGWWLATVSAPAWTLFA 438 FA AGP FG FG+G+ LYFSSQGAAKVGGPVLA T+RL +V +GGWWL SAPAWT FA Sbjct: 374 FAWAGPAFGCFGLGLSLYFSSQGAAKVGGPVLASTLRLAIVALGGWWLFASSAPAWTFFA 433 Query: 439 LVGAAMVAFGLATIISIRLTRWG 461 LV AM FGLAT +++R+TRWG Sbjct: 434 LVSLAMALFGLATALAVRITRWG 456 >ref|NP_947037.1| cation efflux pump [Rhodopseudomonas palustris CGA009] emb|CAE27132.1| probable cation efflux pump (multidrug resistance protein) [Rhodopseudomonas palustris CGA009] Length = 457 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 330/460 (71%), Positives = 380/460 (82%), Gaps = 5/460 (1%) Query: 1 MTIEASIDDASPTAAAPAVPVNDLLTAPILPTLLRLAIPNTIAMFGSTLVAVAETSYIGR 60 MTIEA D +P PA P N LLTAPILPTL+RLAIPNTIAM G+ LVAVAETSYIGR Sbjct: 1 MTIEAPAD--TPL---PAPPPNRLLTAPILPTLVRLAIPNTIAMLGTALVAVAETSYIGR 55 Query: 61 LGTEPLAGIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDRDRAADLALHAAIIGGC 120 LGTEPLA IALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGD RA LALHA +IG Sbjct: 56 LGTEPLAAIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDTHRAGVLALHAILIGIG 115 Query: 121 AGLFFTVMMLGFGRNFYALLGGHGGVLEQSMHYSQVLFSGAISIWLVNTLASVVRGTGDM 180 GL FT++ML FGR +ALLGG G VLEQ+ YS VLFSGA+SIWLVNTLAS++RGTGDM Sbjct: 116 GGLMFTLVMLLFGRPLFALLGGRGDVLEQACSYSVVLFSGAVSIWLVNTLASILRGTGDM 175 Query: 181 RIPSMTLITVSMIQIAVGGVLGLGLFGMPGLGMRGVAAGQLTAFTCGAIFLAWYLASGRS 240 +P+ L+ V+ +Q+ +GG LGLGLFGMP LGM GVA+GQ AFT G++FL YLASGRS Sbjct: 176 ILPAGALLGVAALQVVIGGALGLGLFGMPRLGMPGVASGQAIAFTIGSMFLLIYLASGRS 235 Query: 241 RLKLDFAAFSFQRAMFLDILKVGAISCLSPLQSVLTILIFTKILASFGTETLAGYGMGSR 300 RL+L AFSFQR +F+DILK+GA++CL+PLQSVLTILIFTK+LAS+GT TLAGYG+GSR Sbjct: 236 RLRLQLRAFSFQRPIFVDILKIGALACLAPLQSVLTILIFTKVLASYGTTTLAGYGIGSR 295 Query: 301 LEFLLIPIAFAVGVASVPMVGMAIGAGLVTRARKVAWTAGTVAGLVVGLVGLVVAFKPTL 360 LEFLLIPIAFAVGVAS+PMVGMAIGAG + RAR+VAWTAG V+ ++VGLVG V+A P L Sbjct: 296 LEFLLIPIAFAVGVASIPMVGMAIGAGDIARARRVAWTAGVVSAVIVGLVGAVLAIWPAL 355 Query: 361 WIALFTTDPGVTAAASSYFALAGPGFGFFGVGVCLYFSSQGAAKVGGPVLAGTIRLLLVG 420 W++LFT DP VTAAA +YF LAGPGFGFFG+GV LYF+SQGAAKVGGPVLA T RL+LV Sbjct: 356 WVSLFTADPAVTAAAHTYFHLAGPGFGFFGLGVTLYFASQGAAKVGGPVLAATGRLVLVA 415 Query: 421 IGGWWLATVSAPAWTLFALVGAAMVAFGLATIISIRLTRW 460 +GGW L APA +FA+V AMV +GL + +I LTRW Sbjct: 416 LGGWALVAFGAPASAMFAMVAVAMVVYGLGSAAAIYLTRW 455 >ref|YP_485294.1| MATE efflux family protein [Rhodopseudomonas palustris HaA2] gb|ABD06383.1| MATE efflux family protein [Rhodopseudomonas palustris HaA2] Length = 457 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 331/460 (71%), Positives = 374/460 (81%), Gaps = 5/460 (1%) Query: 1 MTIEASIDDASPTAAAPAVPVNDLLTAPILPTLLRLAIPNTIAMFGSTLVAVAETSYIGR 60 MTI+A D P A+A LL APILPTL+RLAIPN IAM G+ +VA+AETSYIGR Sbjct: 1 MTIDAPADRPLPAASA-----ERLLAAPILPTLIRLAIPNVIAMVGTAVVAIAETSYIGR 55 Query: 61 LGTEPLAGIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDRDRAADLALHAAIIGGC 120 LGTEPLA IALVFPFAMLTQMMSAGAMGGGVSSA+SRALGAGDR RA LALHA IIG Sbjct: 56 LGTEPLAAIALVFPFAMLTQMMSAGAMGGGVSSAVSRALGAGDRTRAEVLALHAIIIGIA 115 Query: 121 AGLFFTVMMLGFGRNFYALLGGHGGVLEQSMHYSQVLFSGAISIWLVNTLASVVRGTGDM 180 AGL FT++ML FGR+ YALLGG G VLEQ+ YS VLFSGA+SIWLVNTLASV+RGTGDM Sbjct: 116 AGLVFTLLMLLFGRSLYALLGGRGEVLEQACSYSVVLFSGAVSIWLVNTLASVLRGTGDM 175 Query: 181 RIPSMTLITVSMIQIAVGGVLGLGLFGMPGLGMRGVAAGQLTAFTCGAIFLAWYLASGRS 240 +PS TL+ V+ +QI +GG LGLGLFG+P LGM GVA+GQL AF+ GA+FL Y+ASG Sbjct: 176 VLPSATLLGVAALQIVIGGGLGLGLFGLPRLGMAGVASGQLIAFSLGALFLLVYMASGHG 235 Query: 241 RLKLDFAAFSFQRAMFLDILKVGAISCLSPLQSVLTILIFTKILASFGTETLAGYGMGSR 300 RL L +F FQR MF+DILK GA++CLSPLQSVLTILIFTKI+AS+G TLAGYG+GSR Sbjct: 236 RLTLRVKSFVFQRPMFVDILKFGAMACLSPLQSVLTILIFTKIIASYGVATLAGYGIGSR 295 Query: 301 LEFLLIPIAFAVGVASVPMVGMAIGAGLVTRARKVAWTAGTVAGLVVGLVGLVVAFKPTL 360 LEFLLIPIAFA GVAS+PMVGMAIGAG V RAR+VAW AG V+ L++GLVGLV+A P+L Sbjct: 296 LEFLLIPIAFAFGVASIPMVGMAIGAGQVARARRVAWIAGAVSALILGLVGLVLAIWPSL 355 Query: 361 WIALFTTDPGVTAAASSYFALAGPGFGFFGVGVCLYFSSQGAAKVGGPVLAGTIRLLLVG 420 W+ALFT+DP V AAASSYF AGPGF FFG+GV LYF+SQGAAKVGGPVLA T RLLLV Sbjct: 356 WVALFTSDPAVAAAASSYFNWAGPGFAFFGLGVTLYFASQGAAKVGGPVLAATARLLLVA 415 Query: 421 IGGWWLATVSAPAWTLFALVGAAMVAFGLATIISIRLTRW 460 IGG L T APA LFALV AMV +GL T +I LTRW Sbjct: 416 IGGTALITSGAPASALFALVLVAMVVYGLGTAAAIHLTRW 455