BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0061.0006.p (452 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578701.1| translocation protein TolB [Nitrobacter hamburg... 791 0.0 ref|YP_319322.1| translocation protein TolB [Nitrobacter winogra... 780 0.0 ref|NP_946471.1| translocation protein TolB [Rhodopseudomonas pa... 771 0.0 ref|YP_534592.1| translocation protein TolB [Rhodopseudomonas pa... 771 0.0 sp|Q20X63.2|TOLB_RHOPB RecName: Full=Protein tolB; Flags: Precursor 771 0.0 >ref|YP_578701.1| translocation protein TolB [Nitrobacter hamburgensis X14] sp|Q1QHQ6.1|TOLB_NITHX RecName: Full=Protein tolB; Flags: Precursor gb|ABE64241.1| TolB-like protein [Nitrobacter hamburgensis X14] Length = 450 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/452 (84%), Positives = 415/452 (91%), Gaps = 2/452 (0%) Query: 1 MIDKTRLPETLFRPSRRQILAGMASAGAMLGGLTGPASAQKRITITEGEFAPVPIAIPNF 60 MID+ L + F PSRRQ+++GMASA +LGG G A Q R+ I +G AP+PIAIPNF Sbjct: 1 MIDRDDLSKMPFHPSRRQMISGMASAAVLLGG--GRAFGQARVQIDQGNVAPLPIAIPNF 58 Query: 61 AAGTPGDAEVGVGVTQVITNNLKRSGLFAPIDQAAYLEKQINIDAAPNFNNWKSINAQAL 120 AG+P D+EVG GV +VITNNLKRSGLFAPIDQAAY+EK NID P F NWK+INAQAL Sbjct: 59 VAGSPSDSEVGAGVAKVITNNLKRSGLFAPIDQAAYIEKITNIDVPPQFANWKTINAQAL 118 Query: 121 VTGRMTRQGNGRVKAEFRLWDVNTGQQLAGQQYDTSAEYWRRIAHIISDQIYERMTGEKG 180 VTGRMTRQG+GR+KAEFRLWDV TGQQLAGQQY TS EYWRRIAHIISDQIYER+TGEKG Sbjct: 119 VTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTSPEYWRRIAHIISDQIYERLTGEKG 178 Query: 181 YFDTRVVFVDESGSADRRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSTQEITYMEFG 240 YFD+RVVFVDESG+A R+KRLALMDQDGANVRYLTRG+DLV+TPRFSPSTQEITYMEFG Sbjct: 179 YFDSRVVFVDESGAAQHRIKRLALMDQDGANVRYLTRGADLVITPRFSPSTQEITYMEFG 238 Query: 241 QGDPRVYLLNIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSM 300 QGDPRVYL NIETGQREIVGNFPGMSFSPRF+PDGQR+IMSLQQGGNSNLFVMDLRSKS Sbjct: 239 QGDPRVYLFNIETGQREIVGNFPGMSFSPRFAPDGQRIIMSLQQGGNSNLFVMDLRSKST 298 Query: 301 TRLTDTPAIDTSPSYAPDGTRLCFESDRGGKPQIYVMPATGGAAQRISFGDGTYSTPVWS 360 TRLTDTPAIDTSPSY+PDG R+CFESDRGG+PQIYVM ATGGAAQRISFG+G+YSTPVWS Sbjct: 299 TRLTDTPAIDTSPSYSPDGGRICFESDRGGRPQIYVMGATGGAAQRISFGEGSYSTPVWS 358 Query: 361 PRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSG 420 PRGDYIAFTKQGGGQF+IGI+KPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSG Sbjct: 359 PRGDYIAFTKQGGGQFSIGIIKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSG 418 Query: 421 PSLFTIDVSGRNELRVPTPGFASDPAWSPLLS 452 PSL+TIDVSGRNEL+VPTPGFASDPAWSPLLS Sbjct: 419 PSLYTIDVSGRNELKVPTPGFASDPAWSPLLS 450 >ref|YP_319322.1| translocation protein TolB [Nitrobacter winogradskyi Nb-255] sp|Q3SP21.1|TOLB_NITWN RecName: Full=Protein tolB; Flags: Precursor gb|ABA05970.1| TolB [Nitrobacter winogradskyi Nb-255] Length = 450 Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/452 (83%), Positives = 409/452 (90%), Gaps = 2/452 (0%) Query: 1 MIDKTRLPETLFRPSRRQILAGMASAGAMLGGLTGPASAQKRITITEGEFAPVPIAIPNF 60 MI++ L FR +RR +++GMASA +LG + A Q R+ ITEG AP+PIAIPNF Sbjct: 1 MIERNGLQRMPFRLNRRHMISGMASAAVLLG--SRQALGQARVQITEGNVAPLPIAIPNF 58 Query: 61 AAGTPGDAEVGVGVTQVITNNLKRSGLFAPIDQAAYLEKQINIDAAPNFNNWKSINAQAL 120 GTP D EVG GV +VITNNLKRSGLFAPIDQAAY+EK NID P F NWK+INAQAL Sbjct: 59 VGGTPSDNEVGAGVAKVITNNLKRSGLFAPIDQAAYIEKITNIDVPPQFANWKTINAQAL 118 Query: 121 VTGRMTRQGNGRVKAEFRLWDVNTGQQLAGQQYDTSAEYWRRIAHIISDQIYERMTGEKG 180 VTGRMTRQG+GR+KAEFRLWDV TGQQLAGQQY TS EYWRRIAHIISDQIYER+TGEKG Sbjct: 119 VTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTSPEYWRRIAHIISDQIYERLTGEKG 178 Query: 181 YFDTRVVFVDESGSADRRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSTQEITYMEFG 240 YFD+RVVFVDESGS+ RRVKRLALMDQDGANVRYLTRG+DLV+TPRFSPSTQE+TYMEFG Sbjct: 179 YFDSRVVFVDESGSSQRRVKRLALMDQDGANVRYLTRGADLVITPRFSPSTQEVTYMEFG 238 Query: 241 QGDPRVYLLNIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSM 300 QGDPRVYL NIETGQREIVGNFPGMSFSPRF+PDGQR+IMSLQQGGNSNLFVMDLRSKS Sbjct: 239 QGDPRVYLFNIETGQREIVGNFPGMSFSPRFAPDGQRIIMSLQQGGNSNLFVMDLRSKST 298 Query: 301 TRLTDTPAIDTSPSYAPDGTRLCFESDRGGKPQIYVMPATGGAAQRISFGDGTYSTPVWS 360 TRLTDTPAIDTSPSY+PDG R+CFESDRGGKPQIYVM ATGG AQRISFG+G+YSTPVWS Sbjct: 299 TRLTDTPAIDTSPSYSPDGARICFESDRGGKPQIYVMGATGGGAQRISFGEGSYSTPVWS 358 Query: 361 PRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSG 420 PRGDYIAFTKQGGGQF+IGI+KPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGG G Sbjct: 359 PRGDYIAFTKQGGGQFSIGIIKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGGGG 418 Query: 421 PSLFTIDVSGRNELRVPTPGFASDPAWSPLLS 452 PSL+TIDVSGRNEL+VPTPGFASDPAWSPLLS Sbjct: 419 PSLYTIDVSGRNELKVPTPGFASDPAWSPLLS 450 >ref|NP_946471.1| translocation protein TolB [Rhodopseudomonas palustris CGA009] ref|YP_001990326.1| translocation protein TolB [Rhodopseudomonas palustris TIE-1] sp|Q6NAR1.1|TOLB_RHOPA RecName: Full=Protein tolB; Flags: Precursor emb|CAE26563.1| putative tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins [Rhodopseudomonas palustris CGA009] gb|ACE99850.1| Tol-Pal system beta propeller repeat protein TolB [Rhodopseudomonas palustris TIE-1] Length = 444 Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/416 (88%), Positives = 392/416 (94%) Query: 37 ASAQKRITITEGEFAPVPIAIPNFAAGTPGDAEVGVGVTQVITNNLKRSGLFAPIDQAAY 96 A Q R+ ITEG AP+PIAIPNF AGTP DAEVG GV+QVITNNLKRSGLFAPIDQAAY Sbjct: 29 AFGQARVQITEGNVAPLPIAIPNFVAGTPSDAEVGTGVSQVITNNLKRSGLFAPIDQAAY 88 Query: 97 LEKQINIDAAPNFNNWKSINAQALVTGRMTRQGNGRVKAEFRLWDVNTGQQLAGQQYDTS 156 LEK NID P F +W SINAQALVTGRMTRQG+GR+KAEFRLWDV TGQQLAGQQY TS Sbjct: 89 LEKITNIDVPPQFKSWASINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTS 148 Query: 157 AEYWRRIAHIISDQIYERMTGEKGYFDTRVVFVDESGSADRRVKRLALMDQDGANVRYLT 216 EYWRRIAHIISDQIYER+TGEKGYFD+RVVF+DESG ADRRVKRLALMDQDGANVRYLT Sbjct: 149 PEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLT 208 Query: 217 RGSDLVLTPRFSPSTQEITYMEFGQGDPRVYLLNIETGQREIVGNFPGMSFSPRFSPDGQ 276 RGSDLVLTPRFSP+ QEITYMEFGQG+PRVYL N+ETGQREIVGNFPGMSF+PRFSPDGQ Sbjct: 209 RGSDLVLTPRFSPTNQEITYMEFGQGEPRVYLFNVETGQREIVGNFPGMSFAPRFSPDGQ 268 Query: 277 RVIMSLQQGGNSNLFVMDLRSKSMTRLTDTPAIDTSPSYAPDGTRLCFESDRGGKPQIYV 336 R+IMSLQQGGNSNLFVMDLRSK+ TRLTDTPAIDTSPSYAPDG+R+CFESDRGGKPQIY+ Sbjct: 269 RIIMSLQQGGNSNLFVMDLRSKATTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQIYI 328 Query: 337 MPATGGAAQRISFGDGTYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 396 MPA+GG AQRISFGDG+YSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH Sbjct: 329 MPASGGQAQRISFGDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 388 Query: 397 NEGPTFAPNGRVLMFFRDPGGNSGPSLFTIDVSGRNELRVPTPGFASDPAWSPLLS 452 NEGPTFAPNGRVLMFFRDPGGN+GPSLFT+DVSGRNELRVPTPG+ASDPAWSPLLS Sbjct: 389 NEGPTFAPNGRVLMFFRDPGGNAGPSLFTVDVSGRNELRVPTPGYASDPAWSPLLS 444 >ref|YP_534592.1| translocation protein TolB [Rhodopseudomonas palustris BisB18] gb|ABD90273.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB18] Length = 450 Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/452 (83%), Positives = 408/452 (90%), Gaps = 5/452 (1%) Query: 2 IDKTRLPETLFRPSRRQ-ILAGMASAGAMLGGLTGPASAQKRITITEGEFAPVPIAIPNF 60 + +RLP SRRQ +L G SA A+L L G A AQ R+ ITEG AP+PIAIPNF Sbjct: 3 VMSSRLPALPL--SRRQALLGGAGSAAALL--LPGGAQAQTRLQITEGNVAPMPIAIPNF 58 Query: 61 AAGTPGDAEVGVGVTQVITNNLKRSGLFAPIDQAAYLEKQINIDAAPNFNNWKSINAQAL 120 AGTP D EVG+GV QVITNNLKRSGLFAPIDQAA++E+ NID P F +WK+INAQAL Sbjct: 59 VAGTPADNEVGLGVAQVITNNLKRSGLFAPIDQAAFIERISNIDTPPQFQSWKTINAQAL 118 Query: 121 VTGRMTRQGNGRVKAEFRLWDVNTGQQLAGQQYDTSAEYWRRIAHIISDQIYERMTGEKG 180 VTGRMT+QG+GR+KAEFRLWDV GQQL GQQY TS EYWRRIAHIISDQIYER+TGEKG Sbjct: 119 VTGRMTKQGDGRLKAEFRLWDVAAGQQLTGQQYFTSPEYWRRIAHIISDQIYERLTGEKG 178 Query: 181 YFDTRVVFVDESGSADRRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSTQEITYMEFG 240 YFD+RVVF+DE+GS +RRVKRLALMDQDGANVRYLTRG+DLVLTPRFSPSTQEITYMEFG Sbjct: 179 YFDSRVVFIDETGSKERRVKRLALMDQDGANVRYLTRGADLVLTPRFSPSTQEITYMEFG 238 Query: 241 QGDPRVYLLNIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSM 300 QGDPRVYL NIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKS Sbjct: 239 QGDPRVYLFNIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKST 298 Query: 301 TRLTDTPAIDTSPSYAPDGTRLCFESDRGGKPQIYVMPATGGAAQRISFGDGTYSTPVWS 360 TRLTDTPAIDTSPSYAPDG+++CFESDRGGKPQIYVMPA GG AQRISFG+G+YSTPVWS Sbjct: 299 TRLTDTPAIDTSPSYAPDGSKICFESDRGGKPQIYVMPAGGGGAQRISFGEGSYSTPVWS 358 Query: 361 PRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSG 420 PRGDYIAFTKQGGGQF+IGIMKPDGSGER+LTSG+HNEGPTFAPNGRVLMFFRDPGGN G Sbjct: 359 PRGDYIAFTKQGGGQFSIGIMKPDGSGERLLTSGYHNEGPTFAPNGRVLMFFRDPGGNGG 418 Query: 421 PSLFTIDVSGRNELRVPTPGFASDPAWSPLLS 452 PSLFT+D+SGRNE +VPTPGFASDPAWSPLLS Sbjct: 419 PSLFTVDISGRNEQKVPTPGFASDPAWSPLLS 450 >sp|Q20X63.2|TOLB_RHOPB RecName: Full=Protein tolB; Flags: Precursor Length = 447 Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/449 (83%), Positives = 407/449 (90%), Gaps = 5/449 (1%) Query: 5 TRLPETLFRPSRRQ-ILAGMASAGAMLGGLTGPASAQKRITITEGEFAPVPIAIPNFAAG 63 +RLP SRRQ +L G SA A+L L G A AQ R+ ITEG AP+PIAIPNF AG Sbjct: 3 SRLPALPL--SRRQALLGGAGSAAALL--LPGGAQAQTRLQITEGNVAPMPIAIPNFVAG 58 Query: 64 TPGDAEVGVGVTQVITNNLKRSGLFAPIDQAAYLEKQINIDAAPNFNNWKSINAQALVTG 123 TP D EVG+GV QVITNNLKRSGLFAPIDQAA++E+ NID P F +WK+INAQALVTG Sbjct: 59 TPADNEVGLGVAQVITNNLKRSGLFAPIDQAAFIERISNIDTPPQFQSWKTINAQALVTG 118 Query: 124 RMTRQGNGRVKAEFRLWDVNTGQQLAGQQYDTSAEYWRRIAHIISDQIYERMTGEKGYFD 183 RMT+QG+GR+KAEFRLWDV GQQL GQQY TS EYWRRIAHIISDQIYER+TGEKGYFD Sbjct: 119 RMTKQGDGRLKAEFRLWDVAAGQQLTGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFD 178 Query: 184 TRVVFVDESGSADRRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSTQEITYMEFGQGD 243 +RVVF+DE+GS +RRVKRLALMDQDGANVRYLTRG+DLVLTPRFSPSTQEITYMEFGQGD Sbjct: 179 SRVVFIDETGSKERRVKRLALMDQDGANVRYLTRGADLVLTPRFSPSTQEITYMEFGQGD 238 Query: 244 PRVYLLNIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSMTRL 303 PRVYL NIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKS TRL Sbjct: 239 PRVYLFNIETGQREIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSTTRL 298 Query: 304 TDTPAIDTSPSYAPDGTRLCFESDRGGKPQIYVMPATGGAAQRISFGDGTYSTPVWSPRG 363 TDTPAIDTSPSYAPDG+++CFESDRGGKPQIYVMPA GG AQRISFG+G+YSTPVWSPRG Sbjct: 299 TDTPAIDTSPSYAPDGSKICFESDRGGKPQIYVMPAGGGGAQRISFGEGSYSTPVWSPRG 358 Query: 364 DYIAFTKQGGGQFAIGIMKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSGPSL 423 DYIAFTKQGGGQF+IGIMKPDGSGER+LTSG+HNEGPTFAPNGRVLMFFRDPGGN GPSL Sbjct: 359 DYIAFTKQGGGQFSIGIMKPDGSGERLLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGPSL 418 Query: 424 FTIDVSGRNELRVPTPGFASDPAWSPLLS 452 FT+D+SGRNE +VPTPGFASDPAWSPLLS Sbjct: 419 FTVDISGRNEQKVPTPGFASDPAWSPLLS 447