BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0060.0006.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770011.1| hypothetical protein bll3371 [Bradyrhizobium ja... 515 e-144 ref|YP_001240735.1| hypothetical protein BBta_4805 [Bradyrhizobi... 445 e-123 ref|YP_001206714.1| putative metal-dependent hydrolase [Bradyrhi... 437 e-121 ref|ZP_07375927.1| amidohydrolase 2 [Ahrensia sp. R2A130] >gi|30... 410 e-112 ref|ZP_01746871.1| hypothetical protein SSE37_21530 [Sagittula s... 397 e-108 >ref|NP_770011.1| hypothetical protein bll3371 [Bradyrhizobium japonicum USDA 110] dbj|BAC48636.1| bll3371 [Bradyrhizobium japonicum USDA 110] Length = 294 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 247/294 (84%), Positives = 263/294 (89%) Query: 1 VTGIVDGHHHIWRQADLAWLSGPMQPRIFGPYEPIRRDYPIEEYLDDLKGTGVTRSVYVQ 60 +TGIVDGHHHIWRQADL WL GPMQPRIFGPYEPIRRDYPI+EYL DLKGTGV RSVYVQ Sbjct: 1 MTGIVDGHHHIWRQADLPWLIGPMQPRIFGPYEPIRRDYPIQEYLGDLKGTGVNRSVYVQ 60 Query: 61 TNWPNGQFEDEAAWVQQTADAHGWPHALVAYADFSVADVRPHLDRLKRYPLVRGVRMQLH 120 TNW N +FEDEAAWVQQTAD GWPHA+VAYA+F+V DVRP LDRLKRYPLVRG+RMQLH Sbjct: 61 TNWANDRFEDEAAWVQQTADEQGWPHAIVAYANFAVDDVRPQLDRLKRYPLVRGMRMQLH 120 Query: 121 WHENPLYRFAARADLCTDPVIRRNVGHLADYSWSFDLQVFAPQMADAAGLAEACPDVTFI 180 WHE+PLYRFA R DLC DP+IRRNVG+LADY WSFDLQVF PQM DAA LAEACP VTFI Sbjct: 121 WHESPLYRFATRPDLCLDPLIRRNVGYLADYGWSFDLQVFTPQMPDAAHLAEACPKVTFI 180 Query: 181 LQHAGMLEDLSPRGRAAWRTGMTRLARCPNVVSKLSGLGTFIHRNDAAHIAGVMTDTVAI 240 LQHAGMLEDLSP GRAAWR GM RLA CPNVVSKLSGLGTFIHRND AHIA V+TDTVAI Sbjct: 181 LQHAGMLEDLSPAGRAAWRAGMARLAACPNVVSKLSGLGTFIHRNDPAHIAAVLTDTVAI 240 Query: 241 FGADRCLFGSNFPIEKLWTSYRDLVAAFKTAAERLSPEQREAIFSTTAARVYRL 294 FGA+RCLFGSNFPIEKLWTSYR+LV AF+ AA LS Q++AIF TTAARVYRL Sbjct: 241 FGAERCLFGSNFPIEKLWTSYRELVDAFRAAAAPLSTGQQDAIFRTTAARVYRL 294 >ref|YP_001240735.1| hypothetical protein BBta_4805 [Bradyrhizobium sp. BTAi1] gb|ABQ36829.1| hypothetical protein BBta_4805 [Bradyrhizobium sp. BTAi1] Length = 295 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 212/294 (72%), Positives = 234/294 (79%) Query: 1 VTGIVDGHHHIWRQADLAWLSGPMQPRIFGPYEPIRRDYPIEEYLDDLKGTGVTRSVYVQ 60 +TG VD HHHIWRQADL WL GPMQPRIFGPYE IRRDY I EYL D+ G+GVT+SVYVQ Sbjct: 1 MTGYVDAHHHIWRQADLPWLVGPMQPRIFGPYESIRRDYTIAEYLGDVAGSGVTQSVYVQ 60 Query: 61 TNWPNGQFEDEAAWVQQTADAHGWPHALVAYADFSVADVRPHLDRLKRYPLVRGVRMQLH 120 TNW F+DEAAWVQ TA+ HG+PHA+VAYAD +V D RP DRL RYPLVRGVRMQLH Sbjct: 61 TNWAKDGFDDEAAWVQSTAEEHGFPHAIVAYADLAVDDARPQFDRLARYPLVRGVRMQLH 120 Query: 121 WHENPLYRFAARADLCTDPVIRRNVGHLADYSWSFDLQVFAPQMADAAGLAEACPDVTFI 180 WH+NPLYRFAA DLC DP IR NV LADY WSFDLQVFA QMADAA LAE CP VTFI Sbjct: 121 WHDNPLYRFAASPDLCNDPHIRANVARLADYGWSFDLQVFAGQMADAAALAETCPSVTFI 180 Query: 181 LQHAGMLEDLSPRGRAAWRTGMTRLARCPNVVSKLSGLGTFIHRNDAAHIAGVMTDTVAI 240 LQHAGMLEDLSP GR AWR GM RLA NVVSKLSGLGTFI RND H+AG++ +T+ + Sbjct: 181 LQHAGMLEDLSPAGREAWRAGMQRLAARRNVVSKLSGLGTFIRRNDPGHVAGIVGETIGL 240 Query: 241 FGADRCLFGSNFPIEKLWTSYRDLVAAFKTAAERLSPEQREAIFSTTAARVYRL 294 FGA+RCLFGSNFPIEKLWT YR LVAA++ A + L R + TA R+YRL Sbjct: 241 FGAERCLFGSNFPIEKLWTDYRALVAAYEAAIQDLDAHARAQVMGETARRIYRL 294 >ref|YP_001206714.1| putative metal-dependent hydrolase [Bradyrhizobium sp. ORS 278] emb|CAL78497.1| conserved hypothetical protein; putative predicted metal-dependent hydrolase of the TIM-barrel fold [Bradyrhizobium sp. ORS 278] Length = 295 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/294 (71%), Positives = 232/294 (78%) Query: 1 VTGIVDGHHHIWRQADLAWLSGPMQPRIFGPYEPIRRDYPIEEYLDDLKGTGVTRSVYVQ 60 +TG VD HHHIWRQADL WL GPMQPRIFGPYEPIRRDY IEEYL D+ G GVT+SVYVQ Sbjct: 1 MTGYVDAHHHIWRQADLPWLVGPMQPRIFGPYEPIRRDYTIEEYLGDIVGNGVTQSVYVQ 60 Query: 61 TNWPNGQFEDEAAWVQQTADAHGWPHALVAYADFSVADVRPHLDRLKRYPLVRGVRMQLH 120 TNW FE+EAAWVQ+TAD HG+PHA+VAYAD +V D RP DRL RYPL+RGVRMQLH Sbjct: 61 TNWAKDGFEEEAAWVQRTADEHGFPHAIVAYADLAVDDARPQFDRLARYPLMRGVRMQLH 120 Query: 121 WHENPLYRFAARADLCTDPVIRRNVGHLADYSWSFDLQVFAPQMADAAGLAEACPDVTFI 180 WH+NPLYRFA+ DLC D IR N+ LADY WSFDLQVFA QM AA LAE+CP VTFI Sbjct: 121 WHDNPLYRFASSPDLCNDSTIRANIARLADYGWSFDLQVFAGQMEGAAALAESCPTVTFI 180 Query: 181 LQHAGMLEDLSPRGRAAWRTGMTRLARCPNVVSKLSGLGTFIHRNDAAHIAGVMTDTVAI 240 LQHAGMLED SP GR WR GM RLA C NVV+KLSGLGTFI RND AH+A V+ +T+A+ Sbjct: 181 LQHAGMLEDPSPAGRQQWRAGMQRLAACRNVVTKLSGLGTFIRRNDPAHVADVVRETIAM 240 Query: 241 FGADRCLFGSNFPIEKLWTSYRDLVAAFKTAAERLSPEQREAIFSTTAARVYRL 294 FGADRCLFGSNFPIEKLWT Y LVAA++ A L + + TA RVYRL Sbjct: 241 FGADRCLFGSNFPIEKLWTDYCALVAAYEAALHGLDKHAQVQVMGETARRVYRL 294 >ref|ZP_07375927.1| amidohydrolase 2 [Ahrensia sp. R2A130] gb|EFL87821.1| amidohydrolase 2 [Ahrensia sp. R2A130] Length = 291 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/291 (65%), Positives = 223/291 (76%) Query: 4 IVDGHHHIWRQADLAWLSGPMQPRIFGPYEPIRRDYPIEEYLDDLKGTGVTRSVYVQTNW 63 ++D HHHIWRQ DL WL GP QPRIFGPY I+RDYPIEE+L D++GTG+ +SVYVQ NW Sbjct: 1 MIDAHHHIWRQKDLPWLLGPEQPRIFGPYAAIKRDYPIEEFLTDIEGTGIEKSVYVQANW 60 Query: 64 PNGQFEDEAAWVQQTADAHGWPHALVAYADFSVADVRPHLDRLKRYPLVRGVRMQLHWHE 123 DE AWVQ AD GWPHA+V YADF+V DVR D+LK YPL+RG+R QLHWH Sbjct: 61 APNWAADEVAWVQSEADRTGWPHAIVGYADFTVDDVRLQFDKLKDYPLMRGIRQQLHWHP 120 Query: 124 NPLYRFAARADLCTDPVIRRNVGHLADYSWSFDLQVFAPQMADAAGLAEACPDVTFILQH 183 NPLYRFA A L DP +RRN+ HLADY WSFDLQVF QM DAAGLAE+CPDVTFILQH Sbjct: 121 NPLYRFAPHAGLPADPTVRRNIAHLADYGWSFDLQVFEAQMVDAAGLAESCPDVTFILQH 180 Query: 184 AGMLEDLSPRGRAAWRTGMTRLARCPNVVSKLSGLGTFIHRNDAAHIAGVMTDTVAIFGA 243 AGMLED +P G W GM RLA+ NVV KLS GTFIHRND A +A ++ ++V IFGA Sbjct: 181 AGMLEDTTPEGWRNWEAGMKRLAKSKNVVCKLSAFGTFIHRNDPAFVAEMVENSVRIFGA 240 Query: 244 DRCLFGSNFPIEKLWTSYRDLVAAFKTAAERLSPEQREAIFSTTAARVYRL 294 RCL+GSN+PIEKLWTSY DL AAF+ A LS ++++IF+ TAARVYR+ Sbjct: 241 TRCLYGSNYPIEKLWTSYGDLFAAFRNATAGLSKARQKSIFNDTAARVYRI 291 >ref|ZP_01746871.1| hypothetical protein SSE37_21530 [Sagittula stellata E-37] gb|EBA07423.1| hypothetical protein SSE37_21530 [Sagittula stellata E-37] Length = 294 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/291 (65%), Positives = 215/291 (73%) Query: 4 IVDGHHHIWRQADLAWLSGPMQPRIFGPYEPIRRDYPIEEYLDDLKGTGVTRSVYVQTNW 63 IVD H H+WRQ DL WL GPMQPRIFGPYEPIRRDYP+ EYLDD+ GTGVT+SVYVQ NW Sbjct: 3 IVDAHFHVWRQDDLPWLKGPMQPRIFGPYEPIRRDYPMTEYLDDIAGTGVTKSVYVQANW 62 Query: 64 PNGQFEDEAAWVQQTADAHGWPHALVAYADFSVADVRPHLDRLKRYPLVRGVRMQLHWHE 123 P + EDEAAW++ GWPH LVAYAD DVRP LDRL R+P +RG+R Q HWH+ Sbjct: 63 PTDKAEDEAAWIESLIAETGWPHGLVAYADMGAEDVRPALDRLARFPHLRGIRQQFHWHQ 122 Query: 124 NPLYRFAARADLCTDPVIRRNVGHLADYSWSFDLQVFAPQMADAAGLAEACPDVTFILQH 183 NP YRFA ADLC D +++NV LADY FDLQVF QM A LA ACPDVTF+LQH Sbjct: 123 NPTYRFAPHADLCLDATVQKNVARLADYGLVFDLQVFDAQMDGACDLARACPDVTFVLQH 182 Query: 184 AGMLEDLSPRGRAAWRTGMTRLARCPNVVSKLSGLGTFIHRNDAAHIAGVMTDTVAIFGA 243 AGMLED S GRA WR M RLA CPNVVSKLSG GTF HR D I + T+TV +FGA Sbjct: 183 AGMLEDTSDAGRARWRAAMERLAGCPNVVSKLSGFGTFQHRLDPDLIGWLTTETVGMFGA 242 Query: 244 DRCLFGSNFPIEKLWTSYRDLVAAFKTAAERLSPEQREAIFSTTAARVYRL 294 DRCL+GSNFPIEKLWT Y L+ A + AA LS +++AIF TA RVYRL Sbjct: 243 DRCLWGSNFPIEKLWTDYTALLDAHRRAAGGLSTVEQQAIFHDTATRVYRL 293