BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0060.0001.p         (65 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770014.1| hypothetical protein bll3374 [Bradyrhizobium ja...   120   7e-26
ref|YP_001206717.1| putative oxidoreductase subunit aerobic-type...   120   7e-26
ref|YP_001240738.1| putative oxidoreductase subunit [Bradyrhizob...   120   8e-26
ref|ZP_07375930.1| dehydrogenase [Ahrensia sp. R2A130] >gi|30329...   106   9e-22
ref|ZP_01746874.1| hypothetical protein SSE37_21545 [Sagittula s...   105   2e-21

>ref|NP_770014.1| hypothetical protein bll3374 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48639.1| bll3374 [Bradyrhizobium japonicum USDA 110]
          Length = 340

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 61/64 (95%), Gaps = 1/64 (1%)

Query: 1   VALSSIDLGQGMKSVTRQICAETLR-XVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 59
           VALSSIDLGQGMKSVTRQICAETL   VEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV
Sbjct: 39  VALSSIDLGQGMKSVTRQICAETLGVPVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 98

Query: 60  MAAA 63
           MAAA
Sbjct: 99  MAAA 102


>ref|YP_001206717.1| putative oxidoreductase subunit aerobic-type carbon monoxide
           dehydrogenase large subunit CoxL/CutL [Bradyrhizobium
           sp. ORS 278]
 emb|CAL78500.1| putative oxidoreductase subunit; putative aerobic-type carbon
           monoxide dehydrogenase, large subunit CoxL/CutL homologs
           [Bradyrhizobium sp. ORS 278]
          Length = 340

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 61/64 (95%), Gaps = 1/64 (1%)

Query: 1   VALSSIDLGQGMKSVTRQICAETLR-XVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 59
           VALSSIDLGQGMKSVTRQICAETL   VEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV
Sbjct: 39  VALSSIDLGQGMKSVTRQICAETLGVPVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 98

Query: 60  MAAA 63
           MAAA
Sbjct: 99  MAAA 102


>ref|YP_001240738.1| putative oxidoreductase subunit [Bradyrhizobium sp. BTAi1]
 gb|ABQ36832.1| purine hydroxylase beta subunit apoprotein [Bradyrhizobium sp.
           BTAi1]
          Length = 340

 Score =  120 bits (301), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 61/64 (95%), Gaps = 1/64 (1%)

Query: 1   VALSSIDLGQGMKSVTRQICAETLR-XVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 59
           VALSSIDLGQGMKSVTRQICAETL   VEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV
Sbjct: 39  VALSSIDLGQGMKSVTRQICAETLGVPVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 98

Query: 60  MAAA 63
           MAAA
Sbjct: 99  MAAA 102


>ref|ZP_07375930.1| dehydrogenase [Ahrensia sp. R2A130]
 gb|EFL87824.1| dehydrogenase [Ahrensia sp. R2A130]
          Length = 343

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 58/64 (90%), Gaps = 1/64 (1%)

Query: 1   VALSSIDLGQGMKSVTRQICAETLR-XVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 59
           V LS+IDLGQGMKSVTRQI AETL   +EDVYVDTADSDTGPH MGSFASRGTHR+GNAV
Sbjct: 39  VTLSAIDLGQGMKSVTRQIAAETLGVPIEDVYVDTADSDTGPHDMGSFASRGTHRMGNAV 98

Query: 60  MAAA 63
           +AAA
Sbjct: 99  IAAA 102


>ref|ZP_01746874.1| hypothetical protein SSE37_21545 [Sagittula stellata E-37]
 gb|EBA07426.1| hypothetical protein SSE37_21545 [Sagittula stellata E-37]
          Length = 340

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 58/64 (90%), Gaps = 1/64 (1%)

Query: 1   VALSSIDLGQGMKSVTRQICAETLR-XVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAV 59
           VALS+IDLGQGMKSVTRQI AETL   VEDVYVDTADSDTGPH MGSFASRGTHR+GNAV
Sbjct: 39  VALSAIDLGQGMKSVTRQIAAETLGVPVEDVYVDTADSDTGPHDMGSFASRGTHRMGNAV 98

Query: 60  MAAA 63
           + A+
Sbjct: 99  IRAS 102