BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0260.p (361 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769078.1| ABC transporter ATP-binding protein [Bradyrhizo... 633 e-179 ref|YP_001204014.1| putative ATP-binding protein of sugar ABC tr... 619 e-175 ref|YP_001238308.1| putative sugar ABC transporter ATP-binding p... 616 e-174 ref|YP_531244.1| ABC transporter-like protein [Rhodopseudomonas ... 596 e-168 ref|YP_780312.1| ABC transporter-like protein [Rhodopseudomonas ... 592 e-167 >ref|NP_769078.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47703.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 361 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 311/361 (86%), Positives = 329/361 (91%) Query: 1 MARIDLVDLAHSYGGNDAPQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGIVT 60 MARIDLVDLAHSYGGN APQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLN+ISGI+T Sbjct: 1 MARIDLVDLAHSYGGNAAPQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNVISGIIT 60 Query: 61 PSRGKILFDGRDITPLSTQKRNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKAEVDARV 120 PSRGKILFDG DITPLSTQKRNIAQVFQFPVIYDTMTVG+NLAFPLKNRGV KAE+D RV Sbjct: 61 PSRGKILFDGVDITPLSTQKRNIAQVFQFPVIYDTMTVGENLAFPLKNRGVPKAEIDRRV 120 Query: 121 RQIADLLDLTPYLKRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR 180 +I LLDL PYL RKATRLTADAKQKISLGRGLVR+DVAAVLFDEPLTVIDPELKWQLR Sbjct: 121 AEIGRLLDLDPYLNRKATRLTADAKQKISLGRGLVRNDVAAVLFDEPLTVIDPELKWQLR 180 Query: 181 SKLKALHRELDLTMIYVTHDQAEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF 240 SKLKALHRELDLTMIYVTHDQ EALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF Sbjct: 181 SKLKALHRELDLTMIYVTHDQTEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF 240 Query: 241 IGSPGMNIVPAEVSGHEARIDGHVIGLHRNYGVLPAGKKIEIGVRPEFVDVAAPASGLLS 300 IGSPGMNI+PAEV G EARI G+VI L R+Y LPAG KIEIGVRPEFVD APA GLL+ Sbjct: 241 IGSPGMNILPAEVRGREARIGGNVIALGRSYDNLPAGAKIEIGVRPEFVDAVAPAPGLLT 300 Query: 301 ATIERIDDLGRIQFARVRVGDTKFAARVPPGFSVSGNTAGLIFNPAHVHVYADSHLVEGV 360 A +ERIDDLGRI+FARVR+G+ K AAR P GF+ + TAGL F+P+HVHVYADS LVEG Sbjct: 301 AKVERIDDLGRIRFARVRIGEAKIAARAPAGFTSADGTAGLKFDPSHVHVYADSLLVEGA 360 Query: 361 A 361 A Sbjct: 361 A 361 >ref|YP_001204014.1| putative ATP-binding protein of sugar ABC transporter [Bradyrhizobium sp. ORS 278] emb|CAL75777.1| putative ATP-binding protein of sugar ABC transporter [Bradyrhizobium sp. ORS 278] Length = 360 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 306/359 (85%), Positives = 323/359 (89%) Query: 1 MARIDLVDLAHSYGGNDAPQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGIVT 60 MARIDLVDLA SY GNDA ESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGI+T Sbjct: 1 MARIDLVDLAQSYHGNDADIESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGILT 60 Query: 61 PSRGKILFDGRDITPLSTQKRNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKAEVDARV 120 PSRGKILFDG DIT ST++RNIAQVFQFPVIYDTMTVG+NLAFPLKNRGV KAE+D RV Sbjct: 61 PSRGKILFDGTDITQRSTRERNIAQVFQFPVIYDTMTVGENLAFPLKNRGVPKAEIDKRV 120 Query: 121 RQIADLLDLTPYLKRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR 180 +IA LLDLTP L RKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR Sbjct: 121 AEIARLLDLTPDLNRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR 180 Query: 181 SKLKALHRELDLTMIYVTHDQAEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF 240 SKLKALHRELDLTMIYVTHDQ EALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF Sbjct: 181 SKLKALHRELDLTMIYVTHDQTEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF 240 Query: 241 IGSPGMNIVPAEVSGHEARIDGHVIGLHRNYGVLPAGKKIEIGVRPEFVDVAAPASGLLS 300 IGSPGMNI+ AEV G EARI GH + L R+Y LPAG +IEIGVRPEFVD+A P GLL Sbjct: 241 IGSPGMNILSAEVKGREARIAGHTLSLARSYDALPAGARIEIGVRPEFVDIAQPGPGLLD 300 Query: 301 ATIERIDDLGRIQFARVRVGDTKFAARVPPGFSVSGNTAGLIFNPAHVHVYADSHLVEG 359 A IER+DDLGRI+FARVRVGD KFAAR+P GFS +G+ GL FNPA+VHVYADS LVEG Sbjct: 301 ANIERVDDLGRIRFARVRVGDAKFAARLPAGFSPAGSAVGLRFNPANVHVYADSRLVEG 359 >ref|YP_001238308.1| putative sugar ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ34402.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 360 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 306/359 (85%), Positives = 321/359 (89%) Query: 1 MARIDLVDLAHSYGGNDAPQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGIVT 60 MARIDLVDLA SY GNDA ESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGI+T Sbjct: 1 MARIDLVDLAQSYHGNDADIESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGILT 60 Query: 61 PSRGKILFDGRDITPLSTQKRNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKAEVDARV 120 PSRGKILFDG DIT +T++RNIAQVFQFPVIYDTMTVG+NLAFPLKNRGV KAE+D RV Sbjct: 61 PSRGKILFDGTDITHRTTRERNIAQVFQFPVIYDTMTVGENLAFPLKNRGVPKAEIDKRV 120 Query: 121 RQIADLLDLTPYLKRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR 180 +IA LLDLTP L RKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR Sbjct: 121 AEIARLLDLTPDLNRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQLR 180 Query: 181 SKLKALHRELDLTMIYVTHDQAEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF 240 SKLKALHRELDLTMIYVTHDQ EALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF Sbjct: 181 SKLKALHRELDLTMIYVTHDQTEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGYF 240 Query: 241 IGSPGMNIVPAEVSGHEARIDGHVIGLHRNYGVLPAGKKIEIGVRPEFVDVAAPASGLLS 300 IGSPGMNI+ AEV G EARI GH + L R+Y LPAG KIEIGVRPEFVDVA P GLL Sbjct: 241 IGSPGMNILAAEVKGREARIAGHTLSLARSYDALPAGAKIEIGVRPEFVDVAEPGPGLLD 300 Query: 301 ATIERIDDLGRIQFARVRVGDTKFAARVPPGFSVSGNTAGLIFNPAHVHVYADSHLVEG 359 A IER+DDLGRI+FARVRVGD KFAAR+P G S G+ GL FNPA+VHVYADS LVEG Sbjct: 301 ANIERVDDLGRIRFARVRVGDVKFAARLPAGVSPQGSAIGLKFNPAYVHVYADSRLVEG 359 >ref|YP_531244.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18] gb|ABD86925.1| ABC transporter related [Rhodopseudomonas palustris BisB18] Length = 367 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 296/362 (81%), Positives = 323/362 (89%), Gaps = 1/362 (0%) Query: 1 MARIDLVDLAHSY-GGNDAPQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGIV 59 MARIDLVDLAH+Y G D P E++ALKPV+MTWRQGGAYALLGPSGCGKTTLLNLISGIV Sbjct: 1 MARIDLVDLAHTYLVGPDLPPEAYALKPVSMTWRQGGAYALLGPSGCGKTTLLNLISGIV 60 Query: 60 TPSRGKILFDGRDITPLSTQKRNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKAEVDAR 119 TPS G+ILFDG D+T LST++RNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKA++D R Sbjct: 61 TPSHGQILFDGTDVTRLSTRERNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKADIDKR 120 Query: 120 VRQIADLLDLTPYLKRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQL 179 V +IA+LLDLTP+LKRKATRLTADAKQKISLGRGLVRSDV+A+LFDEPLTVIDP LKW+L Sbjct: 121 VAEIAELLDLTPHLKRKATRLTADAKQKISLGRGLVRSDVSAILFDEPLTVIDPHLKWEL 180 Query: 180 RSKLKALHRELDLTMIYVTHDQAEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGY 239 RSKLKALHR LDLTMIYVTHDQ EALTFADTVVVMHDGRVVQSGTP ELF+KPAHTFVGY Sbjct: 181 RSKLKALHRALDLTMIYVTHDQTEALTFADTVVVMHDGRVVQSGTPEELFEKPAHTFVGY 240 Query: 240 FIGSPGMNIVPAEVSGHEARIDGHVIGLHRNYGVLPAGKKIEIGVRPEFVDVAAPASGLL 299 FIGSPGMN+VPA+V G EA+I GHVI L R Y LP G KIEIGVRPEFV VA A GLL Sbjct: 241 FIGSPGMNVVPAQVRGREAKIGGHVIPLGRAYDHLPQGAKIEIGVRPEFVHVAPLAPGLL 300 Query: 300 SATIERIDDLGRIQFARVRVGDTKFAARVPPGFSVSGNTAGLIFNPAHVHVYADSHLVEG 359 +ATIERIDDLGR++FARVRVGD KFAAR+PPG S G+ GL+F PA + VYADS LVEG Sbjct: 301 AATIERIDDLGRVRFARVRVGDVKFAARLPPGLSEPGSEVGLVFEPARILVYADSRLVEG 360 Query: 360 VA 361 A Sbjct: 361 QA 362 >ref|YP_780312.1| ABC transporter-like protein [Rhodopseudomonas palustris BisA53] gb|ABJ05332.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 367 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 289/360 (80%), Positives = 322/360 (89%), Gaps = 1/360 (0%) Query: 1 MARIDLVDLAHSY-GGNDAPQESFALKPVTMTWRQGGAYALLGPSGCGKTTLLNLISGIV 59 MARIDLVDLAHSY G++ P ++ALKPV+MTWRQGGAYALLGPSGCGKTTLLNLISGIV Sbjct: 1 MARIDLVDLAHSYLVGDNLPPAAYALKPVSMTWRQGGAYALLGPSGCGKTTLLNLISGIV 60 Query: 60 TPSRGKILFDGRDITPLSTQKRNIAQVFQFPVIYDTMTVGQNLAFPLKNRGVAKAEVDAR 119 TPSRGKILFDG D+T LSTQ RNIAQVFQFPVIYDTMTVG+NLAFPLKNRGV K +++AR Sbjct: 61 TPSRGKILFDGNDVTRLSTQARNIAQVFQFPVIYDTMTVGENLAFPLKNRGVPKPQIEAR 120 Query: 120 VRQIADLLDLTPYLKRKATRLTADAKQKISLGRGLVRSDVAAVLFDEPLTVIDPELKWQL 179 V +IA+LLDLTP+LKRKATRLTADAKQKISLGRGLVRSDVAA+LFDEPLTVIDP LKW+L Sbjct: 121 VAEIAELLDLTPHLKRKATRLTADAKQKISLGRGLVRSDVAAILFDEPLTVIDPHLKWEL 180 Query: 180 RSKLKALHRELDLTMIYVTHDQAEALTFADTVVVMHDGRVVQSGTPAELFDKPAHTFVGY 239 RSKLKALHR LDLTMIYVTHDQ EALTFAD VVVMHDGRVVQ+GTP ELFD+PAHTFVGY Sbjct: 181 RSKLKALHRALDLTMIYVTHDQTEALTFADKVVVMHDGRVVQAGTPEELFDRPAHTFVGY 240 Query: 240 FIGSPGMNIVPAEVSGHEARIDGHVIGLHRNYGVLPAGKKIEIGVRPEFVDVAAPASGLL 299 FIGSPGMN+VPAEVSG EARI GH I L + Y LP+G KIEIGVRPEFV VA PA + Sbjct: 241 FIGSPGMNVVPAEVSGREARIAGHTIALGQAYDALPSGAKIEIGVRPEFVRVAPPAPDRV 300 Query: 300 SATIERIDDLGRIQFARVRVGDTKFAARVPPGFSVSGNTAGLIFNPAHVHVYADSHLVEG 359 A+IERIDDLGR++FAR+R+GD KFAA +P GFS +G+ AGL+F+ + +HVYADSHLVEG Sbjct: 301 PASIERIDDLGRVRFARLRIGDVKFAASMPDGFSPNGSEAGLVFDASRIHVYADSHLVEG 360