BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0259.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238307.1| putative sugar ABC transporter ATP-binding p... 605 e-171 ref|NP_769077.1| ABC transporter ATP-binding protein [Bradyrhizo... 603 e-170 ref|YP_571188.1| ABC transporter-like protein [Rhodopseudomonas ... 600 e-169 ref|YP_004110908.1| ABC transporter-like protein [Rhodopseudomon... 595 e-168 ref|NP_949745.1| sugar ABC transporter ATP-binding protein [Rhod... 591 e-167 >ref|YP_001238307.1| putative sugar ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ34401.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 361 Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust. Identities = 299/360 (83%), Positives = 323/360 (89%), Gaps = 2/360 (0%) Query: 1 MSVTLQNVTRTVDGIPTIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 MSVTL +V+R VDG+ TIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL Sbjct: 1 MSVTLDHVSRVVDGVTTIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 Query: 61 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPRAEIERRVAEAASLF 120 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPR EIE+RVAEAA L Sbjct: 61 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPREEIEKRVAEAARLL 120 Query: 121 RLEPFLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 RLEP+LKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE Sbjct: 121 RLEPYLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 Query: 181 ASGAIFVYATTEPSEALLLGGDTVCMWQGKALQTGATPKVYRHPDTLRVAQVFSDPPLNI 240 ASGAIFVYATTEPSEALLLGG TVCMW+G+ALQ G T VYR PDTLRV QVFSDPP+N+ Sbjct: 181 ASGAIFVYATTEPSEALLLGGRTVCMWEGQALQAGDTATVYRRPDTLRVGQVFSDPPMNV 240 Query: 241 IGIEKKGAQVIYAGGEQAPAAGLYANLPDGRYRTGFRAHQLEV--GNVAAGRHKFSAAVT 298 + I+K+G V YAGG +APAAGLYA+LP+G YR GFR HQL + G+ + GRH F A V+ Sbjct: 241 VEIQKRGDSVHYAGGVRAPAAGLYADLPEGSYRVGFRPHQLGLAKGDGSHGRHAFPATVS 300 Query: 299 VTEITGSESFVHVHVHGSNWVAVLHGVHEYEPGQVLDAALDPDNIFVFDAADRLVASPAT 358 VTEITGSESFVH+ G NWVAVLHGVHEYEPG++LDA LDP NIFVFDA DRLVA+P + Sbjct: 301 VTEITGSESFVHLTRDGMNWVAVLHGVHEYEPGEILDAVLDPANIFVFDAGDRLVAAPGS 360 >ref|NP_769077.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47702.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 358 Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust. Identities = 294/356 (82%), Positives = 317/356 (89%) Query: 1 MSVTLQNVTRTVDGIPTIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 M+VTL +VTRTVDG+ IRDVSLTLE GTL+VLLGPTLSGKTSIMRLLAGLDKPTTG+VL Sbjct: 1 MTVTLDHVTRTVDGVAHIRDVSLTLESGTLNVLLGPTLSGKTSIMRLLAGLDKPTTGKVL 60 Query: 61 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPRAEIERRVAEAASLF 120 V+GKDVTG DVRQRSVAMVYQQFINYPS TVYENIASPLRVQGKPR EIE RVAEAA L Sbjct: 61 VNGKDVTGVDVRQRSVAMVYQQFINYPSFTVYENIASPLRVQGKPREEIEARVAEAAKLL 120 Query: 121 RLEPFLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 RLEPFLKRTPLQLSGGQQQRTA+ARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE Sbjct: 121 RLEPFLKRTPLQLSGGQQQRTAMARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 Query: 181 ASGAIFVYATTEPSEALLLGGDTVCMWQGKALQTGATPKVYRHPDTLRVAQVFSDPPLNI 240 ASGAIFVYATTEP+EALLLGG+TVCMW+G+ALQ G TP VYR P TLRVAQVFSDPPLN+ Sbjct: 181 ASGAIFVYATTEPTEALLLGGNTVCMWEGQALQIGETPSVYRRPQTLRVAQVFSDPPLNL 240 Query: 241 IGIEKKGAQVIYAGGEQAPAAGLYANLPDGRYRTGFRAHQLEVGNVAAGRHKFSAAVTVT 300 +GIEKK V YAGG APA+GLY+ L DG YR GFRAHQL + N RH F A VTVT Sbjct: 241 VGIEKKNGSVQYAGGIAAPASGLYSALADGAYRVGFRAHQLALANGETDRHAFHATVTVT 300 Query: 301 EITGSESFVHVHVHGSNWVAVLHGVHEYEPGQVLDAALDPDNIFVFDAADRLVASP 356 EITGSESFVH+ GSNWVAVLHGVHE+EPGQ +DA LDP+++FVFDAADRLVA+P Sbjct: 301 EITGSESFVHLTRDGSNWVAVLHGVHEFEPGQTIDAVLDPNDVFVFDAADRLVAAP 356 >ref|YP_571188.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB5] gb|ABE41287.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 359 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 294/356 (82%), Positives = 313/356 (87%) Query: 1 MSVTLQNVTRTVDGIPTIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 MSV+L+NVTR +DG+P IRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL Sbjct: 1 MSVSLENVTRMIDGVPAIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 Query: 61 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPRAEIERRVAEAASLF 120 VDGKDVTG DVR+RSVAMVYQQFINYPSLTVYENIASPLRVQGK R EIE+RV EAA L Sbjct: 61 VDGKDVTGFDVRKRSVAMVYQQFINYPSLTVYENIASPLRVQGKSRDEIEQRVQEAAKLL 120 Query: 121 RLEPFLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 +LEP+LKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELR ELPRIFE Sbjct: 121 KLEPYLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRTELPRIFE 180 Query: 181 ASGAIFVYATTEPSEALLLGGDTVCMWQGKALQTGATPKVYRHPDTLRVAQVFSDPPLNI 240 ASGAIFVYATTEPSEALLLGG TVCMW+G+ LQTG TP VYR PDT+RVAQVFSDPPLNI Sbjct: 181 ASGAIFVYATTEPSEALLLGGRTVCMWEGQVLQTGPTPYVYRQPDTMRVAQVFSDPPLNI 240 Query: 241 IGIEKKGAQVIYAGGEQAPAAGLYANLPDGRYRTGFRAHQLEVGNVAAGRHKFSAAVTVT 300 +G EKK V YAGG APA G++A L DG YR GFRAHQ+EV V RH F A V VT Sbjct: 241 VGAEKKAGTVHYAGGVTAPATGVFAGLGDGAYRVGFRAHQIEVARVNPDRHAFQATVAVT 300 Query: 301 EITGSESFVHVHVHGSNWVAVLHGVHEYEPGQVLDAALDPDNIFVFDAADRLVASP 356 EITGSESFVH+ NWVAVLHGVHE+EPGQ LDA LDP N+FVFDAADRLVA+P Sbjct: 301 EITGSESFVHLKRGDDNWVAVLHGVHEFEPGQTLDAILDPANLFVFDAADRLVAAP 356 >ref|YP_004110908.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1] gb|ADU46175.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1] Length = 359 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 290/356 (81%), Positives = 313/356 (87%) Query: 1 MSVTLQNVTRTVDGIPTIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 MSV+L+NVTRT+DG+P IRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPT+GRVL Sbjct: 1 MSVSLENVTRTIDGMPAIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTSGRVL 60 Query: 61 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPRAEIERRVAEAASLF 120 VDGKDVTGADVR RSVAMVYQQFINYPSLTVYENIASPLRVQ KPRAEIE+RV EAA L Sbjct: 61 VDGKDVTGADVRSRSVAMVYQQFINYPSLTVYENIASPLRVQRKPRAEIEQRVQEAAKLL 120 Query: 121 RLEPFLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 +LEP+L+RTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELR ELPRIFE Sbjct: 121 KLEPYLQRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRTELPRIFE 180 Query: 181 ASGAIFVYATTEPSEALLLGGDTVCMWQGKALQTGATPKVYRHPDTLRVAQVFSDPPLNI 240 ASGAIFVYATTEPSEALLLGG T+CMW+G+ALQ G TP+VYR PDT+RVAQVFSDPPLNI Sbjct: 181 ASGAIFVYATTEPSEALLLGGRTICMWEGQALQVGPTPQVYRQPDTMRVAQVFSDPPLNI 240 Query: 241 IGIEKKGAQVIYAGGEQAPAAGLYANLPDGRYRTGFRAHQLEVGNVAAGRHKFSAAVTVT 300 +G EKK V Y+GG APA G++ L DG YR GFRAHQ+ V V RH F A V VT Sbjct: 241 VGAEKKAGTVHYSGGVTAPATGVFTGLSDGAYRVGFRAHQIAVKGVDPDRHAFRATVAVT 300 Query: 301 EITGSESFVHVHVHGSNWVAVLHGVHEYEPGQVLDAALDPDNIFVFDAADRLVASP 356 EITGSESFVH+ WVAVLHG+HEYEPGQ LDA LDP N+FVFDAADRLVA+P Sbjct: 301 EITGSESFVHLKRGDDYWVAVLHGIHEYEPGQTLDAILDPANLFVFDAADRLVAAP 356 >ref|NP_949745.1| sugar ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE29850.1| ATP-binding protein of sugar ABC transporter [Rhodopseudomonas palustris CGA009] Length = 359 Score = 591 bits (1524), Expect = e-167, Method: Compositional matrix adjust. Identities = 287/356 (80%), Positives = 314/356 (88%) Query: 1 MSVTLQNVTRTVDGIPTIRDVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 MSV+L+NVTR +DG+P IR+VSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL Sbjct: 1 MSVSLENVTRVLDGVPAIRNVSLTLERGTLSVLLGPTLSGKTSIMRLLAGLDKPTTGRVL 60 Query: 61 VDGKDVTGADVRQRSVAMVYQQFINYPSLTVYENIASPLRVQGKPRAEIERRVAEAASLF 120 VDGKDVTGADVR RSVAMVYQQFINYPSLTVYENIASPLRVQ K RAEIE+RV EAA L Sbjct: 61 VDGKDVTGADVRTRSVAMVYQQFINYPSLTVYENIASPLRVQRKSRAEIEQRVQEAAKLL 120 Query: 121 RLEPFLKRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRAELPRIFE 180 +LEP+L+RTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELR ELP+IFE Sbjct: 121 KLEPYLQRTPLQLSGGQQQRTAIARALVKGADLVLLDEPLANLDYKLREELRTELPKIFE 180 Query: 181 ASGAIFVYATTEPSEALLLGGDTVCMWQGKALQTGATPKVYRHPDTLRVAQVFSDPPLNI 240 ASGAIFVYATTEPSEALLLGG T+CMW+G+ALQ G TP+VYR PDT+RVAQVFSDPPLNI Sbjct: 181 ASGAIFVYATTEPSEALLLGGRTICMWEGQALQVGPTPQVYRKPDTMRVAQVFSDPPLNI 240 Query: 241 IGIEKKGAQVIYAGGEQAPAAGLYANLPDGRYRTGFRAHQLEVGNVAAGRHKFSAAVTVT 300 +G EKK V Y+GG APA G++A+L DG YR GFRAHQ+EV + RH F A V VT Sbjct: 241 VGAEKKAGTVHYSGGVTAPATGVFASLSDGAYRVGFRAHQIEVKSADPERHAFQATVAVT 300 Query: 301 EITGSESFVHVHVHGSNWVAVLHGVHEYEPGQVLDAALDPDNIFVFDAADRLVASP 356 EITGSESFVH+ WVAVLHG+HE+EPGQ LDA LDP N+FVFDAADRLVA+P Sbjct: 301 EITGSESFVHLKRGDDYWVAVLHGIHEFEPGQTLDAILDPANLFVFDAADRLVAAP 356