BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0255.p         (153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001238303.1| acyl-CoA thioester hydrolase [Bradyrhizobium...   240   5e-62
ref|NP_769070.1| acyl-CoA hydrolase [Bradyrhizobium japonicum US...   233   5e-60
ref|YP_001204009.1| Acyl-CoA thioester hydrolase [Bradyrhizobium...   230   5e-59
ref|YP_576396.1| thioesterase superfamily protein [Nitrobacter h...   223   1e-56
ref|ZP_01046286.1| thioesterase superfamily protein [Nitrobacter...   223   1e-56

>ref|YP_001238303.1| acyl-CoA thioester hydrolase [Bradyrhizobium sp. BTAi1]
 gb|ABQ34397.1| Acyl-CoA thioester hydrolase [Bradyrhizobium sp. BTAi1]
          Length = 143

 Score =  240 bits (613), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 113/139 (81%), Positives = 127/139 (91%)

Query: 12  TDTHVHAPLSTDAGPKGDLCIRTLAMPADTNANGDIFGGWLLSQMDLGGGVFASKVAKSR 71
           T+  VHA LS    P+GDLCIRTLAMPADTNANGDIFGGWLLSQMD+GGGVFA+K+AKSR
Sbjct: 2   TEATVHAALSAPTEPRGDLCIRTLAMPADTNANGDIFGGWLLSQMDVGGGVFAAKIAKSR 61

Query: 72  TVTVAIDAMNFRKAVNVGDLVSVHANLVRIGRTSITVHLEAWVLRRREQQSILVTDGNFT 131
           TVTVAI+AMNFRKAV VGDLVSV+A+LVR+GRTS+TV LEAWVLRRRE+Q ILVTDGNFT
Sbjct: 62  TVTVAIEAMNFRKAVYVGDLVSVYAHLVRVGRTSLTVRLEAWVLRRREEQPILVTDGNFT 121

Query: 132 YVSIDEQGHPQPIQRDGAT 150
           YVSID+ G PQP++RDGAT
Sbjct: 122 YVSIDDDGRPQPVKRDGAT 140


>ref|NP_769070.1| acyl-CoA hydrolase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47695.1| acyl-CoA hydrolase [Bradyrhizobium japonicum USDA 110]
          Length = 143

 Score =  233 bits (595), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 111/133 (83%), Positives = 118/133 (88%)

Query: 12  TDTHVHAPLSTDAGPKGDLCIRTLAMPADTNANGDIFGGWLLSQMDLGGGVFASKVAKSR 71
           TDTHV  P S+D  P GDLCIRTLAMPADTNANGDIFGGWLLSQMD+GGGVFASKVAKSR
Sbjct: 2   TDTHVKTPFSSDTEPSGDLCIRTLAMPADTNANGDIFGGWLLSQMDVGGGVFASKVAKSR 61

Query: 72  TVTVAIDAMNFRKAVNVGDLVSVHANLVRIGRTSITVHLEAWVLRRREQQSILVTDGNFT 131
           TVTVAI+AMNFRKAV VGDLVSV+ANLVR+GRTS+TVHLEAW LRRRE    LVTDGNFT
Sbjct: 62  TVTVAIEAMNFRKAVYVGDLVSVYANLVRVGRTSLTVHLEAWALRRREADPFLVTDGNFT 121

Query: 132 YVSIDEQGHPQPI 144
           YVSID+ G PQ I
Sbjct: 122 YVSIDDHGRPQSI 134


>ref|YP_001204009.1| Acyl-CoA thioester hydrolase [Bradyrhizobium sp. ORS 278]
 emb|CAL75772.1| Acyl-CoA thioester hydrolase [Bradyrhizobium sp. ORS 278]
          Length = 139

 Score =  230 bits (587), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 108/124 (87%), Positives = 119/124 (95%)

Query: 26  PKGDLCIRTLAMPADTNANGDIFGGWLLSQMDLGGGVFASKVAKSRTVTVAIDAMNFRKA 85
           P+GDLCIRTLAMPADTNANGDIFGGWLLSQMD+GGGVFA+KVAKSRTVTVAI+AMNFRKA
Sbjct: 13  PRGDLCIRTLAMPADTNANGDIFGGWLLSQMDVGGGVFAAKVAKSRTVTVAIEAMNFRKA 72

Query: 86  VNVGDLVSVHANLVRIGRTSITVHLEAWVLRRREQQSILVTDGNFTYVSIDEQGHPQPIQ 145
           V VGDLVSV+A+LVRIGRTS+TV LEAWV+RRRE+Q ILVTDGNFTYVSID+ G PQPI+
Sbjct: 73  VYVGDLVSVYAHLVRIGRTSMTVRLEAWVVRRREEQPILVTDGNFTYVSIDDDGRPQPIK 132

Query: 146 RDGA 149
           RDGA
Sbjct: 133 RDGA 136


>ref|YP_576396.1| thioesterase superfamily protein [Nitrobacter hamburgensis X14]
 gb|ABE61936.1| thioesterase superfamily [Nitrobacter hamburgensis X14]
          Length = 154

 Score =  223 bits (567), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 123/142 (86%), Gaps = 1/142 (0%)

Query: 6   VTDSQATD-THVHAPLSTDAGPKGDLCIRTLAMPADTNANGDIFGGWLLSQMDLGGGVFA 64
           +TD+  TD T VHAP  T+  P G+LC RTLAMPADTN NGDIFGGWLLSQMD+GGG+FA
Sbjct: 1   MTDAPMTDATAVHAPAITETAPLGELCTRTLAMPADTNQNGDIFGGWLLSQMDIGGGIFA 60

Query: 65  SKVAKSRTVTVAIDAMNFRKAVNVGDLVSVHANLVRIGRTSITVHLEAWVLRRREQQSIL 124
           SK+AKSRTVTVAIDAMNFRK V VGDLVSVHA LVRIG+TSITVHLEAWV+RR+E Q IL
Sbjct: 61  SKLAKSRTVTVAIDAMNFRKPVFVGDLVSVHATLVRIGKTSITVHLEAWVMRRKEMQFIL 120

Query: 125 VTDGNFTYVSIDEQGHPQPIQR 146
           VTDG FTYV+ID+QG+P+ + +
Sbjct: 121 VTDGKFTYVAIDDQGNPREVPQ 142


>ref|ZP_01046286.1| thioesterase superfamily protein [Nitrobacter sp. Nb-311A]
 gb|EAQ35823.1| thioesterase superfamily protein [Nitrobacter sp. Nb-311A]
          Length = 148

 Score =  223 bits (567), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 109/143 (76%), Positives = 120/143 (83%)

Query: 6   VTDSQATDTHVHAPLSTDAGPKGDLCIRTLAMPADTNANGDIFGGWLLSQMDLGGGVFAS 65
           +TDS    T VH   + DA P G+LC RTLAMPADTN NGDIFGGWLLSQMD+GGGVFAS
Sbjct: 1   MTDSMTDPTAVHTLPNADAAPLGELCTRTLAMPADTNQNGDIFGGWLLSQMDIGGGVFAS 60

Query: 66  KVAKSRTVTVAIDAMNFRKAVNVGDLVSVHANLVRIGRTSITVHLEAWVLRRREQQSILV 125
           K+AKSRTVTVAIDAMNFRK V VGDLVSVHA LVRIGRTSITVHLEAWV+RR+E+  ILV
Sbjct: 61  KLAKSRTVTVAIDAMNFRKPVFVGDLVSVHATLVRIGRTSITVHLEAWVMRRKEKLFILV 120

Query: 126 TDGNFTYVSIDEQGHPQPIQRDG 148
           TDG FTYVSID+ G P+ I +DG
Sbjct: 121 TDGKFTYVSIDDNGRPREIPQDG 143