BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0249.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576393.1| acyl-CoA dehydrogenase [Nitrobacter hamburgensi... 593 e-167 ref|NP_769066.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicu... 592 e-167 ref|YP_319597.1| acyl-CoA dehydrogenase [Nitrobacter winogradsky... 585 e-165 ref|ZP_08628606.1| butyryl-CoA dehydrogenase [Bradyrhizobiaceae ... 585 e-165 ref|YP_002288218.1| acyl-coenzyme a dehydrogenase (acdh) [Oligot... 584 e-164 >ref|YP_576393.1| acyl-CoA dehydrogenase [Nitrobacter hamburgensis X14] gb|ABE61933.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14] Length = 756 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 279/316 (88%), Positives = 301/316 (95%) Query: 1 MSFRRDYMTKPIFSWARGVLPTMSDTEREALEAGDVWWDADLFTGNPDWSKLLAFAPARL 60 MSFRRD ++K IFSWAR VLP+MSDTEREALEAGDVWWDADLFTGNPDW+KLLA +PA L Sbjct: 1 MSFRRDVISKLIFSWARRVLPSMSDTEREALEAGDVWWDADLFTGNPDWTKLLATSPATL 60 Query: 61 TDEEQAFLHGPVDELCRMLDEWKINWEWRDLPPEVWAFIKAKKFFGMIIPKEFGGLGFSP 120 T EE+AFL+GPVDELC MLD+WKINWEWRDLPPEVW+FIK KKFFGMIIP E+GGLGFSP Sbjct: 61 TAEEEAFLNGPVDELCAMLDDWKINWEWRDLPPEVWSFIKQKKFFGMIIPTEYGGLGFSP 120 Query: 121 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGTKEQQDKWLPRLASGQDIPCFGL 180 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGT++QQ KWLPRLA G+D+PCFGL Sbjct: 121 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGTRDQQGKWLPRLADGRDVPCFGL 180 Query: 181 TSPEAGSDAASMIDTGIICKGNFEGREVLGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 240 TSPEAGSDAA+M+D+GIICKG FEGREV+GLRLNWHKRYITLGPVATLLGLAFKAYD DH Sbjct: 181 TSPEAGSDAAAMVDSGIICKGMFEGREVIGLRLNWHKRYITLGPVATLLGLAFKAYDSDH 240 Query: 241 LVGSEEELGITVALIPTHLPGVSIGHRHLPAMQVFQNGPNWGKDVFIPLDYIIGGQERLG 300 LVGS+E+LGITVALIPT LPGVSIG RHLPAMQVFQNGPNWGKDVFIPLDY+IGG+ERLG Sbjct: 241 LVGSQEDLGITVALIPTDLPGVSIGRRHLPAMQVFQNGPNWGKDVFIPLDYVIGGRERLG 300 Query: 301 QGWKMLMTALAAGRGI 316 QGWKMLMTALAAGRGI Sbjct: 301 QGWKMLMTALAAGRGI 316 >ref|NP_769066.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC47691.1| blr2426 [Bradyrhizobium japonicum USDA 110] Length = 759 Score = 592 bits (1525), Expect = e-167, Method: Compositional matrix adjust. Identities = 276/316 (87%), Positives = 299/316 (94%) Query: 1 MSFRRDYMTKPIFSWARGVLPTMSDTEREALEAGDVWWDADLFTGNPDWSKLLAFAPARL 60 MSFRRD +TKPIFSWARGVLP MS+TEREALEAGDVWWDADLFTGNPDW+KLL A L Sbjct: 5 MSFRRDTITKPIFSWARGVLPAMSETEREALEAGDVWWDADLFTGNPDWAKLLKVPQATL 64 Query: 61 TDEEQAFLHGPVDELCRMLDEWKINWEWRDLPPEVWAFIKAKKFFGMIIPKEFGGLGFSP 120 TDEEQAFL+GPVDELC MLDEWKI WEWRDLPP+VW F+K +KFFGMIIPKEFGGLGFSP Sbjct: 65 TDEEQAFLNGPVDELCAMLDEWKIFWEWRDLPPDVWHFVKREKFFGMIIPKEFGGLGFSP 124 Query: 121 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGTKEQQDKWLPRLASGQDIPCFGL 180 YAHSEVVRKIS+RS+ AAVTVMVPNSLGPGELLMRFGTKEQQ +WLPRLA+G+DIPCFGL Sbjct: 125 YAHSEVVRKISTRSIAAAVTVMVPNSLGPGELLMRFGTKEQQARWLPRLANGRDIPCFGL 184 Query: 181 TSPEAGSDAASMIDTGIICKGNFEGREVLGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 240 TSPEAGSDAASM+D+G+ICKG FEGREV+GLRLNWHKRYITLGPVATLLGLAFKAYDPDH Sbjct: 185 TSPEAGSDAASMVDSGVICKGTFEGREVVGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 244 Query: 241 LVGSEEELGITVALIPTHLPGVSIGHRHLPAMQVFQNGPNWGKDVFIPLDYIIGGQERLG 300 LVG +EELGITVALIP++LPGV IGHRHLP+MQVFQNGPN G+DVFIPLDY+IGG+ERLG Sbjct: 245 LVGQQEELGITVALIPSNLPGVEIGHRHLPSMQVFQNGPNRGRDVFIPLDYVIGGKERLG 304 Query: 301 QGWKMLMTALAAGRGI 316 QGWKMLMTALAAGRGI Sbjct: 305 QGWKMLMTALAAGRGI 320 >ref|YP_319597.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] gb|ABA06245.1| Acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 755 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 278/316 (87%), Positives = 295/316 (93%) Query: 1 MSFRRDYMTKPIFSWARGVLPTMSDTEREALEAGDVWWDADLFTGNPDWSKLLAFAPARL 60 MSFRRD ++K IFSWAR VLP+MSDTEREALEAGDVWWDADLFTGNPDWSKLL PA L Sbjct: 1 MSFRRDVISKLIFSWARRVLPSMSDTEREALEAGDVWWDADLFTGNPDWSKLLDTPPATL 60 Query: 61 TDEEQAFLHGPVDELCRMLDEWKINWEWRDLPPEVWAFIKAKKFFGMIIPKEFGGLGFSP 120 T EEQAFL GPVDELC MLDEWKINWE RDLPPEVW FIK KKFFGMIIP E GGLGFSP Sbjct: 61 TAEEQAFLDGPVDELCAMLDEWKINWELRDLPPEVWDFIKQKKFFGMIIPTEHGGLGFSP 120 Query: 121 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGTKEQQDKWLPRLASGQDIPCFGL 180 YAHSEVVRKISSRSL AAVTVMVPNSLGPGELLMRFGT++QQ+KWLPRLA G+D+PCFGL Sbjct: 121 YAHSEVVRKISSRSLVAAVTVMVPNSLGPGELLMRFGTRDQQNKWLPRLADGRDVPCFGL 180 Query: 181 TSPEAGSDAASMIDTGIICKGNFEGREVLGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 240 TSPEAGSDAA+M DTGIICKG FEGREVLGLRLNWHKRYITLGPVATLLGLAFKA+DPDH Sbjct: 181 TSPEAGSDAAAMTDTGIICKGMFEGREVLGLRLNWHKRYITLGPVATLLGLAFKAFDPDH 240 Query: 241 LVGSEEELGITVALIPTHLPGVSIGHRHLPAMQVFQNGPNWGKDVFIPLDYIIGGQERLG 300 L+G++E+LGI+VALIPT LPGVSIG RHLPAMQVFQNGPNWGKDVFIPLDY+IGG+ERLG Sbjct: 241 LIGTQEDLGISVALIPTDLPGVSIGRRHLPAMQVFQNGPNWGKDVFIPLDYVIGGKERLG 300 Query: 301 QGWKMLMTALAAGRGI 316 QGWKMLMTALAAGRGI Sbjct: 301 QGWKMLMTALAAGRGI 316 >ref|ZP_08628606.1| butyryl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08671.1| butyryl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] Length = 753 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 279/345 (80%), Positives = 309/345 (89%), Gaps = 6/345 (1%) Query: 1 MSFRRDYMTKPIFSWARGVLPTMSDTEREALEAGDVWWDADLFTGNPDWSKLLAFAPARL 60 SFRRD +T+PI++WA LP MSDTEREALEAGDVWWDADLFTGNPDWSKLLA APA+L Sbjct: 3 FSFRRDLITRPIYAWAHKALPPMSDTEREALEAGDVWWDADLFTGNPDWSKLLAVAPAKL 62 Query: 61 TDEEQAFLHGPVDELCRMLDEWKINWEWRDLPPEVWAFIKAKKFFGMIIPKEFGGLGFSP 120 TDEE AFL+GPVDELC M+D+WK+NWEWRDLPPEVW FIK +F GMIIPK++GGLGFSP Sbjct: 63 TDEEVAFLNGPVDELCGMIDDWKVNWEWRDLPPEVWEFIKRNRFLGMIIPKDYGGLGFSP 122 Query: 121 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGTKEQQDKWLPRLASGQDIPCFGL 180 YAHSEVVRKIS+RS+TAAVTVMVPNSLGPGELLM FGTKEQ+D+WLP LA+G++IPCFGL Sbjct: 123 YAHSEVVRKISTRSVTAAVTVMVPNSLGPGELLMHFGTKEQRDRWLPGLAAGREIPCFGL 182 Query: 181 TSPEAGSDAASMIDTGIICKGNFEGREVLGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 240 TSPEAGSDAASMIDTGIICKG F G+E LGLRLNWHKRYITLGPVATLLGLAFKAYDPDH Sbjct: 183 TSPEAGSDAASMIDTGIICKGTFNGKETLGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 242 Query: 241 LVGSEEELGITVALIPTHLPGVSIGHRHLPAMQVFQNGPNWGKDVFIPLDYIIGGQERLG 300 L+GSE+ELGITVALIPT LPGVSIG RHLPAMQVFQNGPNWGKDVFIP+D+IIGGQER+G Sbjct: 243 LIGSEDELGITVALIPTDLPGVSIGRRHLPAMQVFQNGPNWGKDVFIPMDFIIGGQERIG 302 Query: 301 QGWKMLMTALAAGRGIR--SAAAGGPATDGVRRARAAGQHRDLRQ 343 QGWKMLMTALAAGRGI S ++ G A ARA G + +R+ Sbjct: 303 QGWKMLMTALAAGRGISLPSQSSAGAAY----CARATGAYARIRE 343 >ref|YP_002288218.1| acyl-coenzyme a dehydrogenase (acdh) [Oligotropha carboxidovorans OM5] ref|YP_004633682.1| acyl-coenzyme A dehydrogenase FadE [Oligotropha carboxidovorans OM5] gb|ACI92353.1| acyl-coenzyme a dehydrogenase (acdh) [Oligotropha carboxidovorans OM5] gb|AEI03864.1| acyl-coenzyme A dehydrogenase FadE [Oligotropha carboxidovorans OM4] gb|AEI07441.1| acyl-coenzyme A dehydrogenase FadE [Oligotropha carboxidovorans OM5] Length = 754 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 279/348 (80%), Positives = 311/348 (89%), Gaps = 6/348 (1%) Query: 1 MSFRRDYMTKPIFSWARGVLPTMSDTEREALEAGDVWWDADLFTGNPDWSKLLAFAPARL 60 SFRRD +T+PIF+WA LP MSDTEREALEAGDVWWDADLFTGNPDWSKLLA APA L Sbjct: 3 FSFRRDVLTRPIFAWAHKALPAMSDTEREALEAGDVWWDADLFTGNPDWSKLLATAPATL 62 Query: 61 TDEEQAFLHGPVDELCRMLDEWKINWEWRDLPPEVWAFIKAKKFFGMIIPKEFGGLGFSP 120 T+EEQAFL GPVDELC M+D+WK+NWEWRDLPP+VW FIKAKKF GMIIPKEFGGLGFSP Sbjct: 63 TEEEQAFLAGPVDELCAMIDDWKVNWEWRDLPPDVWDFIKAKKFLGMIIPKEFGGLGFSP 122 Query: 121 YAHSEVVRKISSRSLTAAVTVMVPNSLGPGELLMRFGTKEQQDKWLPRLASGQDIPCFGL 180 +AHSEV+RK+SSRS+TAAV+VMVPNSLGPGELLM+FGTKEQQDKWLP LASG++IPCFGL Sbjct: 123 FAHSEVIRKLSSRSITAAVSVMVPNSLGPGELLMKFGTKEQQDKWLPGLASGREIPCFGL 182 Query: 181 TSPEAGSDAASMIDTGIICKGNFEGREVLGLRLNWHKRYITLGPVATLLGLAFKAYDPDH 240 TSP+AGSDAASM DTG+ICKG FEG+E+LGLRLNWHKRYITLGPVATLLGLAFKA DPDH Sbjct: 183 TSPDAGSDAASMTDTGVICKGVFEGQEMLGLRLNWHKRYITLGPVATLLGLAFKARDPDH 242 Query: 241 LVGSEEELGITVALIPTHLPGVSIGHRHLPAMQVFQNGPNWGKDVFIPLDYIIGGQERLG 300 L+GS+E+LGITVALIPT LPGV+IG RHLPAMQVFQNGPNWGKDVFIP+DYIIGGQ R+G Sbjct: 243 LIGSQEDLGITVALIPTDLPGVTIGQRHLPAMQVFQNGPNWGKDVFIPMDYIIGGQARIG 302 Query: 301 QGWKMLMTALAAGRGIR--SAAAGGPATDGVRRARAAGQHRDLRQSVR 346 QGWKMLM+ALAAGRGI S +A G A AR AG + +R+ + Sbjct: 303 QGWKMLMSALAAGRGISLPSQSASGAAY----CARTAGAYARVREQFK 346