BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0246.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769064.1| transcriptional regulator [Bradyrhizobium japon... 352 2e-95 ref|YP_001238301.1| TetR family transcriptional regulator [Brady... 323 1e-86 ref|YP_576391.1| TetR family transcriptional regulator [Nitrobac... 310 1e-82 ref|YP_001204007.1| TetR family transcriptional regulator [Brady... 308 3e-82 ref|YP_531239.1| TetR family transcriptional regulator [Rhodopse... 297 7e-79 >ref|NP_769064.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC47689.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 199 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 165/198 (83%), Positives = 181/198 (91%) Query: 8 MTLISEHSETDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKKSIHE 67 MTLI+EH E DTR+RIL VAERLFRQIGYQKTTV DIAKELRMSPANVYRFF+SKK+IH+ Sbjct: 1 MTLIAEHIEGDTRDRILEVAERLFRQIGYQKTTVGDIAKELRMSPANVYRFFESKKAIHQ 60 Query: 68 GVARGLMGEVEIEAQRIARSEGPAAPRLRQMMTTINRMNTERYVGDSKMHEMVEIAMQED 127 VAR LMGEVEIEAQRI GP PR R+++TTI+RMNTERYVGD+K+HEMVEIAMQED Sbjct: 61 AVARSLMGEVEIEAQRIVARPGPVLPRFRELLTTIHRMNTERYVGDNKLHEMVEIAMQED 120 Query: 128 WDVCVAHMECIASIIGEVIAQGAATGEFEIKDLQLASLCACTAMMRFFHPQMIAQCATKP 187 WDVCVAHMECIA +IG++IAQGAA+GEFE DLQLA+LCA TAMMRFFHPQMIAQCATKP Sbjct: 121 WDVCVAHMECIAGVIGQMIAQGAASGEFEAPDLQLAALCASTAMMRFFHPQMIAQCATKP 180 Query: 188 GPTIDQMIDFVIAGLSPR 205 GPTIDQMIDFVIAGLSPR Sbjct: 181 GPTIDQMIDFVIAGLSPR 198 >ref|YP_001238301.1| TetR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ34395.1| transcriptional regulator, TetR family [Bradyrhizobium sp. BTAi1] Length = 203 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 151/202 (74%), Positives = 175/202 (86%) Query: 8 MTLISEHSETDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKKSIHE 67 MTL+S+H E DTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKK+IHE Sbjct: 2 MTLVSDHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKKAIHE 61 Query: 68 GVARGLMGEVEIEAQRIARSEGPAAPRLRQMMTTINRMNTERYVGDSKMHEMVEIAMQED 127 VAR LMG+VE A IA GPAAPRLR+M+ TI+RMNTERYVGDSK+HEMV +AM++ Sbjct: 62 AVARTLMGQVEAAALVIADRPGPAAPRLREMLGTIHRMNTERYVGDSKLHEMVTVAMEQS 121 Query: 128 WDVCVAHMECIASIIGEVIAQGAATGEFEIKDLQLASLCACTAMMRFFHPQMIAQCATKP 187 W+VC AHM+ I IIG VI QGAA+GEF +++L+LA+ CA TAMMRFFHPQMIAQCATKP Sbjct: 122 WEVCEAHMQLITEIIGRVIGQGAASGEFAVRELELAAECATTAMMRFFHPQMIAQCATKP 181 Query: 188 GPTIDQMIDFVIAGLSPRSRAN 209 GPT+D+MIDFV+AGL + A+ Sbjct: 182 GPTVDEMIDFVLAGLGSKGAAS 203 >ref|YP_576391.1| TetR family transcriptional regulator [Nitrobacter hamburgensis X14] gb|ABE61931.1| transcriptional regulator, TetR family [Nitrobacter hamburgensis X14] Length = 203 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 151/199 (75%), Positives = 173/199 (86%) Query: 8 MTLISEHSETDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKKSIHE 67 M +I++++E DTR RILVVAE+LFR+IGYQKTTVADIAK LRMSPANVYRFFDSKK+IH Sbjct: 1 MAMITDNTEADTRHRILVVAEKLFREIGYQKTTVADIAKVLRMSPANVYRFFDSKKAIHH 60 Query: 68 GVARGLMGEVEIEAQRIARSEGPAAPRLRQMMTTINRMNTERYVGDSKMHEMVEIAMQED 127 GVAR LMGEVE AQ I + GPAA RLR++++TI+ MN+ERYVGDSK+HEMV IAM+ED Sbjct: 61 GVARRLMGEVEDAAQAIGAAPGPAAQRLRELLSTIHHMNSERYVGDSKLHEMVAIAMEED 120 Query: 128 WDVCVAHMECIASIIGEVIAQGAATGEFEIKDLQLASLCACTAMMRFFHPQMIAQCATKP 187 WDVC AHME IA+ IGEVIAQGAA GEFE D+ LASLC CTAMMRFFHPQMIAQC KP Sbjct: 121 WDVCKAHMEDIAATIGEVIAQGAANGEFEAPDVPLASLCTCTAMMRFFHPQMIAQCVDKP 180 Query: 188 GPTIDQMIDFVIAGLSPRS 206 GPT+DQMIDFV+AGL+PR Sbjct: 181 GPTLDQMIDFVLAGLAPRG 199 >ref|YP_001204007.1| TetR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL75770.1| putative transcriptional regulator, TetR family [Bradyrhizobium sp. ORS 278] Length = 203 Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 148/199 (74%), Positives = 169/199 (84%) Query: 8 MTLISEHSETDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKKSIHE 67 MTL+SEH E DTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFF+SKK+IH+ Sbjct: 2 MTLVSEHIEPDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFESKKAIHQ 61 Query: 68 GVARGLMGEVEIEAQRIARSEGPAAPRLRQMMTTINRMNTERYVGDSKMHEMVEIAMQED 127 GVAR LMG+VE A IA GPA PRLR+++ TI+RMNTERYVGD+K+HEMV +AM+E Sbjct: 62 GVARELMGQVEAAAIAIAERGGPAVPRLRELLGTIHRMNTERYVGDNKLHEMVAVAMEES 121 Query: 128 WDVCVAHMECIASIIGEVIAQGAATGEFEIKDLQLASLCACTAMMRFFHPQMIAQCATKP 187 W+VC AHM I IIG VI QGAA+GEF + D+ LA+ CA TAMMRFFHPQMIAQCATKP Sbjct: 122 WEVCEAHMMLITEIIGRVIGQGAASGEFAVSDIVLATKCATTAMMRFFHPQMIAQCATKP 181 Query: 188 GPTIDQMIDFVIAGLSPRS 206 GPT+ +MIDFV+AGL R Sbjct: 182 GPTVGEMIDFVLAGLGSRG 200 >ref|YP_531239.1| TetR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD86920.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris BisB18] Length = 211 Score = 297 bits (760), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 139/197 (70%), Positives = 159/197 (80%) Query: 8 MTLISEHSETDTRERILVVAERLFRQIGYQKTTVADIAKELRMSPANVYRFFDSKKSIHE 67 MTL +EH E D RER+LVVAERLFR+IGYQKTTVADIAK +RMSPANVYRFFDSKK+IHE Sbjct: 1 MTLAAEHLEVDMRERVLVVAERLFREIGYQKTTVADIAKVMRMSPANVYRFFDSKKAIHE 60 Query: 68 GVARGLMGEVEIEAQRIARSEGPAAPRLRQMMTTINRMNTERYVGDSKMHEMVEIAMQED 127 GVAR LMGEVE A I R PAA RLR ++TTI+RMN ERYVGD+K+HEMV IAM++ Sbjct: 61 GVARRLMGEVEAAADAIVRRAAPAAQRLRDLLTTIHRMNAERYVGDAKLHEMVAIAMEQS 120 Query: 128 WDVCVAHMECIASIIGEVIAQGAATGEFEIKDLQLASLCACTAMMRFFHPQMIAQCATKP 187 WDVCVAH E I +I EVIA+G A GEF D+ LA+ C CTAM+ FFHPQ+IA KP Sbjct: 121 WDVCVAHFERITGMIAEVIAEGKAAGEFNAPDVPLAATCTCTAMIHFFHPQLIAHVDDKP 180 Query: 188 GPTIDQMIDFVIAGLSP 204 GPTIDQMIDFV+A L+P Sbjct: 181 GPTIDQMIDFVLAALAP 197