BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0238.p (434 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769052.1| hypothetical protein blr2412 [Bradyrhizobium ja... 583 e-164 ref|YP_001238292.1| hypothetical protein BBta_2206 [Bradyrhizobi... 486 e-135 ref|YP_001203996.1| hypothetical protein BRADO1891 [Bradyrhizobi... 476 e-132 ref|YP_004835709.1| hypothetical protein SLG_25770 [Sphingobium ... 163 7e-38 ref|ZP_08390405.1| dolichyl-phosphate-mannose-mannosyltransferas... 154 3e-35 >ref|NP_769052.1| hypothetical protein blr2412 [Bradyrhizobium japonicum USDA 110] dbj|BAC47677.1| blr2412 [Bradyrhizobium japonicum USDA 110] Length = 476 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 300/435 (68%), Positives = 339/435 (77%), Gaps = 5/435 (1%) Query: 5 SKSPSAP-ERPA----ARRAIVAAIIFIVAHVVLLLGITAPDKLYFDEVHYVPAARQMLL 59 SP P E PA +R A++A IF++AH+ LL+G+TAP+K FDEVHYVPAARQML Sbjct: 42 KTSPQKPLELPAVPKMSRSAVIAVAIFLMAHLALLIGLTAPEKFVFDEVHYVPAARQMLA 101 Query: 60 PVREGPILNPMHPPLAKEIIALSIKAFGDVPLGWRYPAALFGALALVGVYLGGLALFASQ 119 PV P+LNPMHPPLAKE+IA SI FGD LGWRYPA LFGALA+V +YL GLALFA+Q Sbjct: 102 PVMSQPMLNPMHPPLAKELIAASIATFGDNALGWRYPATLFGALAIVAIYLCGLALFAAQ 161 Query: 120 QRAIAAVLLAFFNQMLFVQSRIAMLDIFALAFGLFAIAAFVHGFRQPRPQSAFALAGLFA 179 AIAA L+A FNQML+VQ+RIAMLDIFAL FGL A AAF+HGFR+ RP + FALAG Sbjct: 162 GPAIAAALIAAFNQMLYVQARIAMLDIFALGFGLLATAAFMHGFRRERPHALFALAGGLF 221 Query: 180 GLATACKWSGLFVLATCIAIVAVILLMQGWRTRFADANAEDWYRPELWPDFRVPHVIVCF 239 G A ACKWSGLF L CI IVAVI LMQGWRT FADA +DWYRP+LWPDFR PHV +CF Sbjct: 222 GCAAACKWSGLFPLGICIVIVAVIRLMQGWRTLFADARPDDWYRPDLWPDFRAPHVALCF 281 Query: 240 VLIPAAVYLATFVPLYGLSFTDIMEAQRRILADNTTAAIAGHTYMSSWPSWPFLVRPVWY 299 ++PA YLA F+PLYGLS D++E QRRI ADNTT AIAGHTYMSSWPSWP L RPVW+ Sbjct: 282 AVLPAMTYLAAFIPLYGLSLPDLIEGQRRIFADNTTTAIAGHTYMSSWPSWPLLARPVWF 341 Query: 300 LFEKVGDDRFAAIVFLGNPLVLWPALIALIIALRDWIVGRSRDAFLVLAFYLGPYLAWAL 359 LF+K +D +AIVFLGNPLVLWPAL AL I LRD +V R DAFL+ AFY GP+LAWAL Sbjct: 342 LFDKTAEDSVSAIVFLGNPLVLWPALAALAIVLRDVVVARRWDAFLIAAFYFGPWLAWAL 401 Query: 360 LPRTLGFIYYYLPAATTASFVLVYALTRKGAPRWLLWTFVAVGCAGFVAMLPVTAAVIET 419 LPRTLGFIYYYLPAAT AS LVY L R G PRWLLW +V + GF MLP++AA I T Sbjct: 402 LPRTLGFIYYYLPAATAASLALVYVLRRNGLPRWLLWAYVGLAAIGFAIMLPISAAFIGT 461 Query: 420 SMATFNRLMLFQGWI 434 SM FNRLMLFQ WI Sbjct: 462 SMQGFNRLMLFQSWI 476 >ref|YP_001238292.1| hypothetical protein BBta_2206 [Bradyrhizobium sp. BTAi1] gb|ABQ34386.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 444 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/422 (62%), Positives = 310/422 (73%), Gaps = 3/422 (0%) Query: 14 PAARR-AIVAAIIFIVAHVVLLLGITAPDKLYFDEVHYVPAARQMLLPVREGPILNPMHP 72 PA RR A+ A +IF + HV+L++G+ AP K FDEVHYVPAARQML P LNPMHP Sbjct: 25 PAVRRCALTALLIFAITHVLLMVGVAAPSKFVFDEVHYVPAARQMLGLAPAAPQLNPMHP 84 Query: 73 PLAKEIIALSIKAFGDVPLGWRYPAALFGALALVGVYLGGLALFASQQRAIAAVLLAFFN 132 PLAKE+IALSI+ FGD WRYP + GALA+V +YL GLALFA+Q A+AA LLA N Sbjct: 85 PLAKELIALSIRTFGDNAFAWRYPGTVLGALAVVAIYLCGLALFAAQPAALAAALLALVN 144 Query: 133 QMLFVQSRIAMLDIFALAFGLFAIAAFVHGFRQPRPQSAFALAGLFAGLATACKWSGLFV 192 QMLFVQ+R AMLDI ALAF L IAAF+ + Q RPQ FALAG G+A ACKWSGLF Sbjct: 145 QMLFVQARAAMLDIGALAFSLLGIAAFLFAYGQRRPQLLFALAGALFGVAVACKWSGLFP 204 Query: 193 LATCIAIVAVILLMQGWRTRFADANAEDWYRPELWPDFRVPHVIVCFVLIPAAVYLATFV 252 L T + IV VI L+Q W+T F D DWYRPE WP+ R H+++C V IPA YLATFV Sbjct: 205 LLTVLGIVGVIKLLQHWQTAFGDPQPTDWYRPEQWPELRGWHILLCLVAIPALCYLATFV 264 Query: 253 PLYGLSFTDIMEAQRRILADNTTAAIAGHTYMSSWPSWPFLVRPVWYLFEKVGDDRFAAI 312 PL+G+S I +AQRRI AD+ T AIAGHTYMS+WP+WP L+RPVW+LF+K GD AA+ Sbjct: 265 PLHGMSIPGIFDAQRRIFADSITTAIAGHTYMSAWPTWPLLMRPVWFLFDKAGDSDIAAV 324 Query: 313 VFLGNPLVLWPALIALIIALRDWIVGRSRDAFLVLAFYLGPYLAWALLPRTLGFIYYYLP 372 V LGNPLVLWPAL+AL + RD + RS AFL+LAFYLG YL WALLPR L F+YYYLP Sbjct: 325 VLLGNPLVLWPALVALAVCARDVVAARSAPAFLILAFYLGCYLPWALLPRALSFLYYYLP 384 Query: 373 AATTASFVLVYALTRKGAPRWLLWTFVAVGCAGFVAMLPVTAAVIETSMATFNRLMLFQG 432 +AT S LV+ALTR PRW LW +VAV GF+ MLP++AA I T+M F+RLMLF Sbjct: 385 SATLTSLALVHALTRL--PRWALWAYVAVATIGFLVMLPISAAFIGTTMQGFSRLMLFPS 442 Query: 433 WI 434 WI Sbjct: 443 WI 444 >ref|YP_001203996.1| hypothetical protein BRADO1891 [Bradyrhizobium sp. ORS 278] emb|CAL75759.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 457 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 269/421 (63%), Positives = 314/421 (74%), Gaps = 3/421 (0%) Query: 15 AARRAIVAAI-IFIVAHVVLLLGITAPDKLYFDEVHYVPAARQMLLPVREGPILNPMHPP 73 +ARR +++ + IF VAHVVL++G+ AP K FDEVHYVPAARQML P LNPMHPP Sbjct: 39 SARRPLLSVLLIFFVAHVVLMVGLAAPPKFVFDEVHYVPAARQMLGLAPASPQLNPMHPP 98 Query: 74 LAKEIIALSIKAFGDVPLGWRYPAALFGALALVGVYLGGLALFASQQRAIAAVLLAFFNQ 133 LAKE+IALSI+ FGD WRYP+ + G LA+ +YL GLALFA+Q AIAA LLA NQ Sbjct: 99 LAKELIALSIRTFGDNSFAWRYPSTVLGGLAIAAIYLCGLALFAAQGPAIAAALLALVNQ 158 Query: 134 MLFVQSRIAMLDIFALAFGLFAIAAFVHGFRQPRPQSAFALAGLFAGLATACKWSGLFVL 193 MLFVQ+RIAMLDI ALAF L AIAAF+ +RQ RPQ ALAG GLA ACKWSGLF Sbjct: 159 MLFVQARIAMLDIGALAFSLLAIAAFLFAYRQRRPQLLLALAGALFGLAVACKWSGLFPW 218 Query: 194 ATCIAIVAVILLMQGWRTRFADANAEDWYRPELWPDFRVPHVIVCFVLIPAAVYLATFVP 253 T + IV +I L+Q W+T F DA DWY+PE WP R PH+++C L+PA VYLATF+P Sbjct: 219 LTALLIVGLIKLLQHWQTSFGDAEPTDWYQPEQWPALRWPHILLCLGLLPALVYLATFIP 278 Query: 254 LYGLSFTDIMEAQRRILADNTTAAIAGHTYMSSWPSWPFLVRPVWYLFEKVGDDRFAAIV 313 L+GLS T I EAQRRI AD+ T AIAGHTYMSSWP+WP LVRPVW+LF+K D AAIV Sbjct: 279 LHGLSVTGIAEAQRRIFADSITTAIAGHTYMSSWPTWPLLVRPVWFLFDKASDGDIAAIV 338 Query: 314 FLGNPLVLWPALIALIIALRDWIVGRSRDAFLVLAFYLGPYLAWALLPRTLGFIYYYLPA 373 LGNPLVLWPA+IAL + D + R AFL+LAFYLG YL WALLPR L F+YYYLP+ Sbjct: 339 LLGNPLVLWPAVIALAVCAWDLLARRRATAFLILAFYLGCYLPWALLPRALSFLYYYLPS 398 Query: 374 ATTASFVLVYALTRKGAPRWLLWTFVAVGCAGFVAMLPVTAAVIETSMATFNRLMLFQGW 433 AT AS LV+AL R PRW LW +VAV GFV MLPV+AA I T+M+TF+RLMLFQ W Sbjct: 399 ATLASLALVHALLR--LPRWALWAYVAVAALGFVVMLPVSAAFIGTTMSTFSRLMLFQSW 456 Query: 434 I 434 I Sbjct: 457 I 457 >ref|YP_004835709.1| hypothetical protein SLG_25770 [Sphingobium sp. SYK-6] dbj|BAK67252.1| hypothetical protein SLG_25770 [Sphingobium sp. SYK-6] Length = 431 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 155/445 (34%), Positives = 210/445 (47%), Gaps = 58/445 (13%) Query: 14 PAARRAIVAAIIFIVAHVVLLLGITAPDKLYFDEVHYVPAARQMLLPVREGPILNPMHPP 73 P R +AA +A + L + P K+ FDE HYVPAAR +L G + NP HPP Sbjct: 19 PGWRDVAIAACFLAIALALFLFRLGDPAKINFDESHYVPAAR--ILTAFSG-LPNPEHPP 75 Query: 74 LAKEIIALSIKAFGDVPLGWRYPAALFGALALVGV-YLGGLALFASQQRAIAAVLLAFFN 132 L K +I + GD PLGWR +ALFGA ALVG + L ++ A+ L + Sbjct: 76 LGKLLIGAGMAMLGDNPLGWRIMSALFGA-ALVGAGVMAARWLLGTRPAAVMTGSLLLLS 134 Query: 133 QMLFVQSRIAMLDIFALAFGLFAI----AAFVHGFRQPRPQSAFALAGLFAGLATACKWS 188 MLFVQ+RIAMLDIF +F + A AA GFR + LAG+F GLATACKW Sbjct: 135 PMLFVQARIAMLDIFMASFLMLAFWMLAAAGRTGFRD---RWRLVLAGIFLGLATACKW- 190 Query: 189 GLFVLATCIAIVAVILLMQGW---RTRFADANAEDWYRPELWPDFRVPHVIVCFVLIPAA 245 T I +V V LL+ W R R + RP V + F L P A Sbjct: 191 ------TAIPLVGVALLL--WLAVRPRLGTPRSLA-ARP-------VSLLEGLFWLGPFA 234 Query: 246 V--YLATFVPLYGLSFTD------IMEAQRRILADNTTAAIAGHTYMSSWPSWPFLVRPV 297 V YLATF+PL L TD I+ Q +L +A +A H Y S W W +RP+ Sbjct: 235 VLIYLATFLPLGWLE-TDAVPPWRIVHQQFEML-RLQSAPMASHGYQSQWWQWVLSIRPI 292 Query: 298 WYLFEKVGDDRFAAIVFLGNPLVLWPALIALIIALRDWIVGRSRDAFLVLAFYLGPYLAW 357 WY +E V D ++ +GNP + W L+ALI L + + +V+ + + Sbjct: 293 WYFYEPV-DGIQRGVLLIGNPAISWGGLVALIACLYAGLRQGAWPLLIVVLLWAASLGFF 351 Query: 358 ALLPRTLGFIYYYLPAATTASFVLVYALT----RKGAPRWLLWTFVAVGCAGFVAML--- 410 ++P+ + F Y+Y PA+ F AL ++G C GF A+L Sbjct: 352 IVIPKPVMFYYHYFPASLLLCFATAGALDHWFWQRGN------RLAPALCIGFAALLFAE 405 Query: 411 --PVTAAVIETSMATFNRLMLFQGW 433 P+ +A + FNR M W Sbjct: 406 FNPIISAAPLSDPQDFNRWMWLDSW 430 >ref|ZP_08390405.1| dolichyl-phosphate-mannose-mannosyltransferase family protein [Sphingomonas sp. S17] gb|EGI53346.1| dolichyl-phosphate-mannose-mannosyltransferase family protein [Sphingomonas sp. S17] Length = 414 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 122/367 (33%), Positives = 171/367 (46%), Gaps = 28/367 (7%) Query: 28 VAHVVLLLGITAPDKLYFDEVHYVPAARQMLLPVREGPILNPMHPPLAKEIIALSIKAFG 87 +A + +T P L FDEVHYVPAAR +L GP+ N HP L K +IA I FG Sbjct: 21 IAQTIFSWRLTTPHTLVFDEVHYVPAARTLL--ALSGPV-NIEHPLLGKALIAAGIALFG 77 Query: 88 DVPLGWRYPAALFGALALVGVYLGGLALFASQQRAIAAVLLAFFNQMLFVQSRIAMLDIF 147 D PLGWR + L G + GV+ + + A A +L N ++ VQ+RIAMLD F Sbjct: 78 DNPLGWRALSTLAGTAIVGGVFAITWLMTLRTRAAAMAAVLTIVNFLVLVQARIAMLDGF 137 Query: 148 ALAFGLFAIAAFVHGFRQPRPQSAF--ALAGLFAGLATACKWSGLFVLATCIAIVAVILL 205 AF + A+AA R QS + L + GLA KW+ + L A + ++L Sbjct: 138 MAAFVVLAVAAMGWAMRGSVAQSRWRWTLGAVLLGLAVGVKWAAVPYLG--YAAIGFVML 195 Query: 206 MQGWRTRFADANAEDWYRPELWPDFRVPHVIVCFVLIPAAVYLATFVPLY-----GLSFT 260 G P WP + Y TF P + ++ Sbjct: 196 KHG--------------DPSRWPGLCWWSAWALLGVGAGLAYAVTFAPAFFYISEPMTLA 241 Query: 261 DIMEAQRRILADNTTAAIAGHTYMSSWPSWPFLVRPVWYLFEKVGDDRFAAIVFLGNPLV 320 ++ Q + A T + H Y S+W SWP + RP+WY +E V D I LGNP V Sbjct: 242 RLLPFQLEMYARQTQI-LPPHAYQSTWWSWPVIGRPIWYFYE-VADGAQRGIFLLGNPAV 299 Query: 321 LWPALIALIIALRDWIVGRSRDAFLVLAFYLGPYLAWALLPRTLGFIYYYLPAATTASFV 380 +W L+A+ W+ GR + A ++G + WA++P++LGF YYY A S V Sbjct: 300 MWGGLVAVAACALGWLRGREVRLGVAAALWIGGFAVWAIIPKSLGFYYYYFLPAIWLSVV 359 Query: 381 LVYALTR 387 L A+ R Sbjct: 360 LAVAIDR 366