BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0225.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07027429.1| TadE family protein [Afipia sp. 1NLS2] >gi|29...   178   3e-43
ref|YP_319141.1| TadE-like protein [Nitrobacter winogradskyi Nb-...   177   3e-43
ref|YP_002290193.1| TadE family protein [Oligotropha carboxidovo...   176   8e-43
ref|ZP_08627195.1| hypothetical protein CSIRO_0252 [Bradyrhizobi...   171   4e-41
ref|YP_578351.1| TadE-like [Nitrobacter hamburgensis X14] >gi|91...   166   1e-39

>ref|ZP_07027429.1| TadE family protein [Afipia sp. 1NLS2]
 gb|EFI51185.1| TadE family protein [Afipia sp. 1NLS2]
          Length = 145

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 113/136 (83%), Gaps = 1/136 (0%)

Query: 3   SFFRCRSGASAVEFALMLPLFLAFIFGIIVFGSYLAMVHGVQQLAAEAARSSIAGMTDTE 62
            F R  SGASAVEFAL+LP+F+  +FGI++FG+YLAMVH VQQLAAEAAR+S+AG+ +TE
Sbjct: 10  DFRRACSGASAVEFALVLPVFMLLVFGIVMFGAYLAMVHDVQQLAAEAARTSVAGLNETE 69

Query: 63  RNSLATNYVTANASTYPLLVAANLTVNAAPSPSNANVYVVTVNYNAAGNFIYKLP-FVPA 121
           R SLATNYVT NA++YPL+V A+L+VNAA S ++ NV++VTVNY+A+  FIY LP FVPA
Sbjct: 70  RKSLATNYVTQNAASYPLIVPAHLSVNAATSGADPNVFIVTVNYDASNTFIYSLPSFVPA 129

Query: 122 PASTIVRSAAIQYGGF 137
           P   IVRSAAI  GG+
Sbjct: 130 PPPVIVRSAAIPGGGY 145


>ref|YP_319141.1| TadE-like protein [Nitrobacter winogradskyi Nb-255]
 gb|ABA05789.1| TadE-like protein [Nitrobacter winogradskyi Nb-255]
          Length = 146

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 2/134 (1%)

Query: 4   FFRCRSGASAVEFALMLPLFLAFIFGIIVFGSYLAMVHGVQQLAAEAARSSIAGMTDTER 63
           F RC   ASAVEFA++LPLFL  + GI+VFG+YL MVHGVQQLAAEAARSS+AG+++TER
Sbjct: 15  FARCARAASAVEFAMLLPLFLVLVAGIVVFGAYLTMVHGVQQLAAEAARSSVAGLSETER 74

Query: 64  NSLATNYVTANASTYPLLVAANLTVNAAPSPSNANVYVVTVNYNAAGNFIYKLPFVPAPA 123
            SLA NYVT NA +YPLL   +LT++AA   S   V+VVTVNY+A+ + I+ LPFVPAP 
Sbjct: 75  TSLAENYVTTNAGSYPLLQPGHLTMSAA--TSGGGVFVVTVNYDASDSIIFTLPFVPAPP 132

Query: 124 STIVRSAAIQYGGF 137
           STIVRSAAI +GGF
Sbjct: 133 STIVRSAAIPFGGF 146


>ref|YP_002290193.1| TadE family protein [Oligotropha carboxidovorans OM5]
 ref|YP_004631851.1| hypothetical protein OCA5_c08880 [Oligotropha carboxidovorans OM5]
 gb|ACI94328.1| TadE family protein [Oligotropha carboxidovorans OM5]
 gb|AEI02034.1| hypothetical protein OCA4_c08870 [Oligotropha carboxidovorans OM4]
 gb|AEI05610.1| hypothetical protein OCA5_c08880 [Oligotropha carboxidovorans OM5]
          Length = 145

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 112/136 (82%), Gaps = 1/136 (0%)

Query: 3   SFFRCRSGASAVEFALMLPLFLAFIFGIIVFGSYLAMVHGVQQLAAEAARSSIAGMTDTE 62
            F + RSGASAVEFA++LP+FL  +FGI++FG+YLA+VH VQQLAAEAAR+S+AG+ +TE
Sbjct: 10  DFSKARSGASAVEFAIVLPVFLMLVFGIVMFGAYLALVHDVQQLAAEAARTSVAGLNETE 69

Query: 63  RNSLATNYVTANASTYPLLVAANLTVNAAPSPSNANVYVVTVNYNAAGNFIYKLP-FVPA 121
           R SLA +YV  NA++YPL+V A L+VNAA S ++ NV++VTVNY+A+  FIY LP FVPA
Sbjct: 70  RRSLAASYVAQNAASYPLIVPAQLSVNAATSSTDPNVFIVTVNYDASHTFIYTLPSFVPA 129

Query: 122 PASTIVRSAAIQYGGF 137
           P  TIVRSAAI  GG+
Sbjct: 130 PPPTIVRSAAIPRGGY 145


>ref|ZP_08627195.1| hypothetical protein CSIRO_0252 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP10105.1| hypothetical protein CSIRO_0252 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 164

 Score =  171 bits (433), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/130 (63%), Positives = 112/130 (86%), Gaps = 1/130 (0%)

Query: 9   SGASAVEFALMLPLFLAFIFGIIVFGSYLAMVHGVQQLAAEAARSSIAGMTDTERNSLAT 68
            GA AVEFA++ P+FL  +FGI+++GSYL++VHGVQQLAAEAARSS+AG++++ER+SLA 
Sbjct: 35  DGAIAVEFAMIAPVFLMMVFGIVMYGSYLSVVHGVQQLAAEAARSSVAGLSESERSSLAN 94

Query: 69  NYVTANASTYPLLVAANLTVNAAPSPSNANVYVVTVNYNAAGNFIYKLP-FVPAPASTIV 127
           +Y+T N ++YPL+  A LTVNAA S S+ANV++V+VNY+A+G FIY LP FVPAP+STIV
Sbjct: 95  SYITGNVNSYPLIDPARLTVNAATSVSDANVFIVSVNYDASGMFIYSLPTFVPAPSSTIV 154

Query: 128 RSAAIQYGGF 137
           R+AAI  GG+
Sbjct: 155 RTAAIPRGGY 164


>ref|YP_578351.1| TadE-like [Nitrobacter hamburgensis X14]
 gb|ABE63891.1| TadE-like protein [Nitrobacter hamburgensis X14]
          Length = 147

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/134 (69%), Positives = 113/134 (84%), Gaps = 2/134 (1%)

Query: 4   FFRCRSGASAVEFALMLPLFLAFIFGIIVFGSYLAMVHGVQQLAAEAARSSIAGMTDTER 63
           F RC  GASAVEFA++LPLFL  +FGI+VFG+YL MVH VQQLAAEAARSS+AG+++TER
Sbjct: 16  FARCGRGASAVEFAMLLPLFLVLVFGIVVFGAYLTMVHSVQQLAAEAARSSVAGLSETER 75

Query: 64  NSLATNYVTANASTYPLLVAANLTVNAAPSPSNANVYVVTVNYNAAGNFIYKLPFVPAPA 123
            S+A NYVTANA +YPLL  ++LTV+AA S S  +V+VVTVNY+A+ +FIY LPFVPAP 
Sbjct: 76  VSIAENYVTANAGSYPLLQPSHLTVSAATSGS--DVFVVTVNYDASDSFIYTLPFVPAPT 133

Query: 124 STIVRSAAIQYGGF 137
           STI RSAAI +GGF
Sbjct: 134 STIARSAAIPFGGF 147