BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0219.p (529 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001262070.1| FAD-binding monooxygenase [Sphingomonas witt... 489 e-136 ref|YP_003607687.1| monooxygenase FAD-binding protein [Burkholde... 464 e-128 ref|YP_776191.1| monooxygenase, FAD-binding [Burkholderia ambifa... 412 e-112 ref|YP_001241450.1| putative FAD-binding monooxygenase [Bradyrhi... 394 e-107 ref|YP_001207028.1| putative FAD-binding monooxygenase 3 [Bradyr... 394 e-107 >ref|YP_001262070.1| FAD-binding monooxygenase [Sphingomonas wittichii RW1] gb|ABQ67932.1| monooxygenase, FAD-binding [Sphingomonas wittichii RW1] Length = 525 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 259/522 (49%), Positives = 335/522 (64%), Gaps = 8/522 (1%) Query: 9 IHDVAIVGLGPVGAIFANLLAKSGLRVAVVERVADIYDKPRAITLDHEALRVLQAVGL-G 67 ++DV +VG+GPVG + A LL ++GLRVAV+ER I+DKPRAI LDHEALRVLQA G+ Sbjct: 3 VYDVIVVGMGPVGTVTACLLGRAGLRVAVIEREMAIFDKPRAIVLDHEALRVLQACGVTA 62 Query: 68 DFMEQAIAPHNGSHYLGVDGEIIKIFDPMPPPFPLGWIPNVTFVQPDVEQALRDKLAGYP 127 DF + +APH G+ +LGVDG++IK+FDP PPPF LGW PN+ F+QP +E AL D +A YP Sbjct: 63 DFFD-TLAPHTGTDFLGVDGQLIKLFDPKPPPFELGWPPNMMFIQPYLEAALDDAMAKYP 121 Query: 128 HADIFLAATGVALQQDDGAVMLTARRESGEELLIRARYLVGCDGANSFVRKQLGIGLDDL 187 + + T A+ QD+ V + A G I AR++VG DGANS VR+ GIG+DDL Sbjct: 122 NVERRRGWTVTAIDQDEQGVRVEAATAEGRRT-IEARWIVGADGANSTVRRAAGIGVDDL 180 Query: 188 AFDEWWMVIDTLTSEPARRPAKSFQYCWPSRPGTFVPGPRNLRRWEIKLLPGEDPEAAGA 247 F EWW+V+D + PA P K+ QYCWP RP TFV GP+NLRRWEIKLLPG+D EA Sbjct: 181 DFKEWWIVVDAWLTGPADLPRKTTQYCWPDRPATFVVGPQNLRRWEIKLLPGDDLEALQD 240 Query: 248 PDNVVNLLKGFTDISDLTIWRSAVYRFHALLGQRWRDRRVLLMGDAVHQTPPFLGQGLCA 307 + +L+ + D++ IWRSAVYRF A + +WR R+ L GDA H PPFL QGLCA Sbjct: 241 EGAIREILRRYVDVTACNIWRSAVYRFRAAVATQWRSGRMFLAGDAAHTMPPFLAQGLCA 300 Query: 308 GIRDAVNLAWKLRLVLRGDAGDALLDSYEIERKPHVRAVVASAKEFGKIIGELDPVAAVE 367 G+RDA N+AWKL V R +LLDSYEIERKPHV +V AK FG IIGELD A+ Sbjct: 301 GLRDAANIAWKLEQVERHGTAASLLDSYEIERKPHVTEIVRHAKAFGLIIGELDRERALA 360 Query: 368 RDVRLRADLKAGKAETIRQKFIPDLVSGLIARDAALAGRLFVQPHVRAPDGRTCRLDDLL 427 RD L L+ G T RQ FIP L G + AG++FVQP + DGR +DD++ Sbjct: 361 RDTVLAEQLRTGAVSTERQAFIPPLHQGFLENGCPSAGQVFVQPRI-LRDGREHLMDDVI 419 Query: 428 KLEFAIVTTAADPMAWLSEASSSAWQRLSGERVVIATSGESADRGGILSVVERDGLFAEW 487 FA+ A+ + L + W R+ G + SG+ A+ I ++ E DG A W Sbjct: 420 GPSFAVFAN-AEALDALDASLVREWLRIGG---TLLLSGDEAEEAPIETLDESDGRVAGW 475 Query: 488 MRQHGAAAVIVRPDRYVFGAAGNADELNMLVGQLLQNLSAGR 529 + + AAVIVRPDRYV+GAA + L ++ LL+ L+ R Sbjct: 476 LERESKAAVIVRPDRYVYGAADDGRALATMMADLLRQLAPDR 517 >ref|YP_003607687.1| monooxygenase FAD-binding protein [Burkholderia sp. CCGE1002] gb|ADG18176.1| monooxygenase FAD-binding protein [Burkholderia sp. CCGE1002] Length = 539 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 249/517 (48%), Positives = 321/517 (62%), Gaps = 9/517 (1%) Query: 10 HDVAIVGLGPVGAIFANLLAKSGLRVAVVERVADIYDKPRAITLDHEALRVLQAVGLGDF 69 +D I G GP GA +NLLA G+RVAVVER DIYDKPRAIT DHEA+R QA GL + Sbjct: 4 YDAIISGYGPTGATLSNLLAMMGMRVAVVERDRDIYDKPRAITADHEAMRAFQAAGLAEE 63 Query: 70 MEQAIAPHNGSHYLGVDGEIIKIFDPMPPPFPLGWIPNVTFVQPDVEQALRDKLAGYPHA 129 + + PH G+ ++GVDG+ IK F PMP P PLGW P F QP +E LRD + + Sbjct: 64 VAKGTCPHPGTDFVGVDGQTIKRFYPMPAPGPLGWEPTFMFHQPTLEGVLRDGVKRFESV 123 Query: 130 DIFLAATGVALQQDDGAVMLTARRESGEELLIRARYLVGCDGANSFVRKQLGIGLDDLAF 189 D+FL + V+L QD V + G +R +YL+ CDGA S VR Q+ + DLAF Sbjct: 124 DVFLEHSLVSLHQDAEGVEINVAGPGGSNKTLRGKYLLACDGARSVVRSQIESTIYDLAF 183 Query: 190 DEWWMVIDTLTSEPARRPAKSFQYCWPSRPGTFVPGPRNLRRWEIKLLPGEDPEAAGAPD 249 DEWW+V+D P + QYC P RPGT++ GP LRRWEIK+LPGE PE+ P Sbjct: 184 DEWWVVVDADLHNDVDLPERCVQYCRPWRPGTYIVGPDRLRRWEIKVLPGEMPESFNDPA 243 Query: 250 NVVNLLKGFTDISDLTIWRSAVYRFHALLGQRWRDRRVLLMGDAVHQTPPFLGQGLCAGI 309 ++ +L F D + + R A+YRFHA++ ++WR+ RV L+GDA HQ PPF+GQGLCAG+ Sbjct: 244 HLDRVLSTFVDTGAIEVKRVAIYRFHAVVAEKWREGRVFLLGDAAHQMPPFMGQGLCAGV 303 Query: 310 RDAVNLAWKLRLVLRGDAGDALLDSYEIERKPHVRAVVASAKEFGKIIGELDPVAAVERD 369 RDA NLAWKL VLRG A DALLD+Y ER+PHV+ VV +AK FG IIGELD AA ERD Sbjct: 304 RDAYNLAWKLDAVLRGKAEDALLDTYGQERRPHVQTVVETAKSFGLIIGELDEGAARERD 363 Query: 370 VRLRADLKAGKAETIRQKFIPDLVSGLIARD-----AALAGRLFVQPHVRAPDGRTCRLD 424 RL +L AG A+TIRQ FIP L +GL+ RD A AG+LF QP V + RLD Sbjct: 364 SRLGVELAAGTAQTIRQSFIPGLATGLLYRDAIGALGAGAGQLFPQPWVSSQGIGRLRLD 423 Query: 425 DLLKLEFAIVTTAADPMAWLSEASSSAWQRLSGERVVIATSGESADRG---GILSVVERD 481 DL++ F +VT + +A ++ L+ VV E G +++V E Sbjct: 424 DLVRGNFYLVTWNIE-LAAVARDILGTVASLADAMVVCVGEAEQGTAGLEAEVIAVTEEL 482 Query: 482 GLFAEWMRQHGAAAVIVRPDRYVFGAAGNADELNMLV 518 GL A W+ + G A +VRPD + +G+A N EL +V Sbjct: 483 GLVARWLTETGTVAAVVRPDGFAYGSARNQGELKDMV 519 >ref|YP_776191.1| monooxygenase, FAD-binding [Burkholderia ambifaria AMMD] gb|ABI89857.1| monooxygenase, FAD-binding protein [Burkholderia ambifaria AMMD] Length = 520 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/514 (43%), Positives = 302/514 (58%), Gaps = 7/514 (1%) Query: 11 DVAIVGLGPVGAIFANLLAKSGLRVAVVERVADIYDKPRAITLDHEALRVLQAVGLGDFM 70 DV I G GP GA+ ANLL K G+R ++ +YDKPRAI LDHE +R+ Q +GL + + Sbjct: 6 DVLISGFGPAGAVAANLLGKLGIRTLCFDKARTVYDKPRAIALDHEIMRIFQDLGLAERI 65 Query: 71 EQAIAPHNGSHYLGVDGEIIKIFDPMPPPFPLGWIPNVTFVQPDVEQALRDKLAGYPHAD 130 IA S Y GVDG++IK D +P P+PLG+ P + F QP VE ALR++ A Y + Sbjct: 66 ASHIAAFPPSEYYGVDGDLIKRIDTVPQPYPLGYTPTMVFTQPPVEAALREQAATYDCIE 125 Query: 131 IFLAATGVALQQDDGAVMLTARRESGEELLIRARYLVGCDGANSFVRKQLGIGLDDLAFD 190 + L V + D V R + GE + RYL+ CDGA+SFVR +LGI LDDL FD Sbjct: 126 VALGTELVDFEDDGERVRAQLRSDIGETRTVTGRYLIACDGASSFVRTRLGIALDDLIFD 185 Query: 191 EWWMVIDTLTSEP--ARRPAKSFQYCWPSRPGTFVPGPRNLRRWEIKLLPGEDPEAAGAP 248 E W+V+D +E A+ P + QYC P+RP T++ GP + RRWEI L P EDP Sbjct: 186 EPWVVVDMRVNERGLAKLPKVAIQYCEPARPCTYIVGPGSHRRWEIMLSPNEDPREMQRE 245 Query: 249 DNVVNLLKGFTDISDLTIWRSAVYRFHALLGQRWRDRRVLLMGDAVHQTPPFLGQGLCAG 308 + V LL + D +WR+A YRFHAL+ +WR RV + GDA HQ PPF+GQG+C G Sbjct: 246 EKVWELLSRWLTPDDGELWRAASYRFHALVAAQWRRGRVFIAGDAAHQQPPFIGQGMCQG 305 Query: 309 IRDAVNLAWKLRLVLRGDAGDALLDSYEIERKPHVRAVVASAKEFGKIIGELDPVAAVER 368 +RD VNL WKL VLRG + DALLDSYE+ERK HVR + K+ G++I E D AA ER Sbjct: 306 VRDVVNLTWKLERVLRGGSSDALLDSYEVERKAHVRCLTTRIKDIGRVICERDVEAARER 365 Query: 369 DVRLRADLKAGKAETIRQKFIPDLVSGLIARDA-ALAGRLFVQPHVRAPDGRTCRLDDLL 427 D RL + RQ+ +P L +GL+A+D + G LF QP V A G LD ++ Sbjct: 366 DARLLREAGGVVKTVTRQEIVPPLQAGLLAKDGNPVGGTLFPQPLVDAQGGAAQLLDVVV 425 Query: 428 KLEFAIVTTAADPMAWLSEASSSAWQRLSGERVVIATSGESADRGGILSVVERDGLFAEW 487 + IV + A L ++ +A + + + + +G A G+L+V E +G+ A W Sbjct: 426 GGGWRIVASEA---GVLGASALAAAREIPATVIQVGPAGGEAS-AGVLAVTECEGVLARW 481 Query: 488 MRQHGAAAVIVRPDRYVFGAAGNADELNMLVGQL 521 H A IVRPD YV+G A +A EL + L Sbjct: 482 FVTHSCKAAIVRPDHYVWGVAADAAELERQLSTL 515 >ref|YP_001241450.1| putative FAD-binding monooxygenase [Bradyrhizobium sp. BTAi1] gb|ABQ37544.1| putative FAD-binding monooxygenase [Bradyrhizobium sp. BTAi1] Length = 514 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/529 (41%), Positives = 305/529 (57%), Gaps = 18/529 (3%) Query: 1 MSLSADNPIHDVAIVGLGPVGAIFANLLAKSGLRVAVVERVADIYDKPRAITLDHEALRV 60 MS +D + V IVG GP GAI A+LL + G+ ++R +IYDKPRAI LDHE +R+ Sbjct: 1 MSFMSDANHYQVVIVGFGPTGAIAASLLGRDGITTLAIDRAREIYDKPRAIALDHEIMRL 60 Query: 61 LQAVGLGDFMEQAIAPHNGSHYLGVDGEIIKIFDPMPPPFPLGWIPNVTFVQPDVEQALR 120 +G+ + + + +AP S + G G++I+ D + P+PLG+ P++ F QP VEQ +R Sbjct: 61 FDNLGIAEQVSRYVAPFPASEHFGAQGQLIRRIDMIGEPYPLGYTPSMVFTQPPVEQVMR 120 Query: 121 DKLAGYPHADIFLAATGVALQQDDGAVMLTARRESGEELLIRARYLVGCDGANSFVRKQL 180 D +AG P + L T V ++QD A + RE G + A Y++ CDGA+S VR++L Sbjct: 121 DYVAGLPSVTVELGTTLVDIRQDANAATVVLTREDGATREVTADYVIACDGASSTVRQKL 180 Query: 181 GIGLDDLAFDEWWMVIDTLTSEPARR--PAKSFQYCWPSRPGTFVPGPRNLRRWEIKLLP 238 GI DDL FDE W+V+D ++ R PA + Q+C P+RP T++ GP N RR+EI L P Sbjct: 181 GITFDDLDFDEPWLVVDIRVNDSGVRKLPATAAQFCNPARPTTYILGPGNHRRFEIMLRP 240 Query: 239 GEDPEAAGAPDNVVNLLKGFTDISDLTIWRSAVYRFHALLGQRWRDRRVLLMGDAVHQTP 298 GED A P++V LL + D +WR+A YRFHAL+ RWR RVLL GDA HQ P Sbjct: 241 GEDRHAMAQPEHVWQLLSPWLAPQDGQLWRAASYRFHALVASRWRQGRVLLAGDAAHQQP 300 Query: 299 PFLGQGLCAGIRDAVNLAWKLRLVLRGDAGDALLDSYEIERKPHVRAVVASAKEFGKIIG 358 PF+GQG+C G+RDA NL WKL VLRG + + LLDSYE ER HVR + K G++I Sbjct: 301 PFIGQGMCQGLRDAANLCWKLSRVLRGQSRETLLDSYEAERSTHVRELTTRIKAIGRVIC 360 Query: 359 ELDPVAAVERDVRLRADLKAGKAETIRQKFIPDLVSGLIA-RDAALAGRLFVQPHVRAPD 417 E DP AA RD R+ A+ RQ+ +P L +GL+A + A G LF QP + D Sbjct: 361 EQDPAAAAARDARILAEGGGVPRTITRQEIVPPLTTGLLATKPNAANGTLFPQPWILC-D 419 Query: 418 GRTCRLDDLLKLEFAIVTTAADPMAWLSEASSSAWQRLSGERVVIATSGESADRGGILSV 477 G LD L + ++ + AS +A V I SG + Sbjct: 420 GERALLDRLAGAGWRLILDGRSEL----RASDAATGAAGIHTVSIGGSG----------L 465 Query: 478 VERDGLFAEWMRQHGAAAVIVRPDRYVFGAAGNADELNMLVGQLLQNLS 526 E G+ A W +HG +A +VRPD YV+G A + EL L+ +L + L+ Sbjct: 466 PEESGVVARWFERHGCSAALVRPDHYVYGVAKDTPELAALLSELTERLN 514 >ref|YP_001207028.1| putative FAD-binding monooxygenase 3 [Bradyrhizobium sp. ORS 278] emb|CAL78811.1| putative FAD-binding monooxygenase; putative 3-(3-hydroxy-phenyl)propionate hydroxylase [Bradyrhizobium sp. ORS 278] Length = 506 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/527 (41%), Positives = 304/527 (57%), Gaps = 24/527 (4%) Query: 3 LSADNPIHDVAIVGLGPVGAIFANLLAKSGLRVAVVERVADIYDKPRAITLDHEALRVLQ 62 +SAD+ + V IVGLGP GA A+LL + + ++R DIYDKPRAI LDHE +R+ Sbjct: 1 MSADH--YQVVIVGLGPTGATVASLLGREDVATLAIDRAVDIYDKPRAIALDHEIMRLFD 58 Query: 63 AVGLGDFMEQAIAPHNGSHYLGVDGEIIKIFDPMPPPFPLGWIPNVTFVQPDVEQALRDK 122 +G+ + + +AP S + G G++I+ D + P+PLG+ P++ F QP VEQ +RD+ Sbjct: 59 NLGIAGEVSRYVAPFPASEHFGAQGQLIRRIDMVGEPYPLGYTPSMVFTQPPVEQVMRDR 118 Query: 123 LAGYPHADIFLAATGVALQQDDGAVMLTARRESGEELLIRARYLVGCDGANSFVRKQLGI 182 +A P + L T V ++Q+ A + +RE G + A Y++ CDGA+S VR++LGI Sbjct: 119 VAACPSVTVELGTTLVDIRQNANAATVVLQREDGSTREVSADYVIACDGASSTVRQKLGI 178 Query: 183 GLDDLAFDEWWMVIDTLT--SEPARRPAKSFQYCWPSRPGTFVPGPRNLRRWEIKLLPGE 240 DDL FDE W+V+D S + P + Q+C P+RP T++ GP N RR+EI L PGE Sbjct: 179 HFDDLDFDEPWLVVDISVNASGAGKLPKTAAQFCNPARPTTYIIGPGNHRRFEIMLRPGE 238 Query: 241 DPEAAGAPDNVVNLLKGFTDISDLTIWRSAVYRFHALLGQRWRDRRVLLMGDAVHQTPPF 300 D A P+ V LL + +D +WR+A YRFHAL+ RWR RVLL GDA HQ PPF Sbjct: 239 DRHAMERPEQVWQLLAPWLSPADGELWRAASYRFHALVASRWRQGRVLLAGDAAHQQPPF 298 Query: 301 LGQGLCAGIRDAVNLAWKLRLVLRGDAGDALLDSYEIERKPHVRAVVASAKEFGKIIGEL 360 +GQG+C G+RDA NL+WKL VLRG++ D LLDSYE ER HVR + K G++I E Sbjct: 299 IGQGMCQGLRDAGNLSWKLIRVLRGESHDTLLDSYEAERSTHVRELTTRIKAIGRVICEQ 358 Query: 361 DPVAAVERDVRLRADLKAGKAETIRQKFIPDLVSGLIARDA-ALAGRLFVQPHVRAPDGR 419 DP AA RD R+ A+ RQ+ +P L +GL+A A A+ G LF QP + + GR Sbjct: 359 DPAAAAARDERILAEGGGAPRTITRQEIVPPLTTGLLATKANAVNGTLFPQPWIISDAGR 418 Query: 420 TCRLDDLLKLEFAIVTTAADPMAWLSEASSSAWQRLSGERVVIATSGESADRGGILSVVE 479 LD T A + + S+ + + E I G + E Sbjct: 419 AL-LD----------TIAGSGWRLVLDGSALSAPAMPSEITAITIGGS--------GLKE 459 Query: 480 RDGLFAEWMRQHGAAAVIVRPDRYVFGAAGNADELNMLVGQLLQNLS 526 G+ A W +HG A +VRPD YV+G A +A EL ++ +L L+ Sbjct: 460 ESGVVARWFERHGCHAALVRPDHYVYGVARDAPELAAVLSELKTRLN 506