BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0205.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773447.1| dehydrogenase [Bradyrhizobium japonicum USDA 11... 431 e-119 ref|YP_004611355.1| short-chain dehydrogenase/reductase SDR [Mes... 341 7e-92 ref|YP_004134388.1| short-chain dehydrogenase/reductase sdr [Mes... 335 4e-90 ref|ZP_01743609.1| dehydrogenase [Rhodobacterales bacterium HTCC... 322 3e-86 ref|YP_004611369.1| short-chain dehydrogenase/reductase SDR [Mes... 292 4e-77 >ref|NP_773447.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC52072.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 215/259 (83%), Positives = 234/259 (90%) Query: 1 MKNSGKVVAITGAARGIGKACAARFLADGARVVISDVDAAGLVHTAQELGHIDQLRAVEA 60 MK SGKV AITGAARGIGKACA RFL DG +VVISDVDA GL TA ELG D LR V Sbjct: 1 MKLSGKVAAITGAARGIGKACAKRFLDDGVKVVISDVDAEGLAATAVELGRPDALRTVVG 60 Query: 61 DVSKRADVDRIVAHAVKEFGRLDVMVNNAGVARNRDFLDISEAEFDDVMGINLKGAFFGV 120 +V KRADVD++VA AVKEFGRLD+MVNNAGVARNRD L+ISE EFD+++GINLKGAFFGV Sbjct: 61 NVGKRADVDQLVATAVKEFGRLDIMVNNAGVARNRDILEISEEEFDEIIGINLKGAFFGV 120 Query: 121 QAAARQMIAQGSGGVVINMSSVNALLAIPSLATYAMSKGALKQLTSVAAVALAPHGIRVV 180 QAAARQMIAQG GGV+INMSSVNALLAIP+LATYAMSKG +KQLTSVAAVALAPH IRVV Sbjct: 121 QAAARQMIAQGGGGVIINMSSVNALLAIPALATYAMSKGGMKQLTSVAAVALAPHNIRVV 180 Query: 181 AVGPGTILTEMVATAIFSSEDARRSVLSRTPAGRCGEPSEVASVVAFLASNDASYITGQT 240 AVGPGTILT+MVA+AI++SEDAR++VLSRTP GR GEPSEVASVVAFLAS+DASYITGQT Sbjct: 181 AVGPGTILTDMVASAIYTSEDARKTVLSRTPIGRGGEPSEVASVVAFLASDDASYITGQT 240 Query: 241 IYPDGGRLILNYTVPVSEK 259 IYPDGGRLILNYTVPV EK Sbjct: 241 IYPDGGRLILNYTVPVKEK 259 >ref|YP_004611355.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium opportunistum WSM2075] gb|AEH87261.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium opportunistum WSM2075] Length = 259 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 169/259 (65%), Positives = 208/259 (80%), Gaps = 1/259 (0%) Query: 1 MKNSGKVVAITGAARGIGKACAARFLADGARVVISDVDAAGLVHTAQELGHIDQLRAVEA 60 M+ +GKV +TGAARGIG+ACA RFLA+GA++V+ D+DA L A E+G D + AV Sbjct: 1 MRQAGKVAVVTGAARGIGRACAERFLAEGAKLVLGDIDATELRKCAAEIGTADSVLAVVT 60 Query: 61 DVSKRADVDRIVAHAVKEFGRLDVMVNNAGVARNRDFLDISEAEFDDVMGINLKGAFFGV 120 DVSK+ VD +VA AV +FGR+D+MVNNAG+A +DFLDI+EA++D V+ +NLKGAF G Sbjct: 61 DVSKKEQVDGLVAAAVAKFGRVDIMVNNAGIAPVQDFLDITEADYDRVLAVNLKGAFTGT 120 Query: 121 QAAARQMIAQGSGGVVINMSSVNALLAIPSLATYAMSKGALKQLTSVAAVALAPHGIRVV 180 QAAARQMIAQG GGV+INMSS+N+ LA P +ATYA+SKG + Q+TS AAVA APHGIRVV Sbjct: 121 QAAARQMIAQGGGGVIINMSSINSGLANPRVATYAISKGGMNQVTSTAAVAFAPHGIRVV 180 Query: 181 AVGPGTILTEMVATAIF-SSEDARRSVLSRTPAGRCGEPSEVASVVAFLASNDASYITGQ 239 VGPGTI T+MV F SE+ RR+VLSRTP GR G +E+ASVVAFLAS+DASYITG+ Sbjct: 181 GVGPGTIATDMVMDGTFIDSEEMRRAVLSRTPLGRLGTAAEIASVVAFLASDDASYITGE 240 Query: 240 TIYPDGGRLILNYTVPVSE 258 TIYPDGGR +LNYTVP+ E Sbjct: 241 TIYPDGGRRVLNYTVPIKE 259 >ref|YP_004134388.1| short-chain dehydrogenase/reductase sdr [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV15214.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 259 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 166/259 (64%), Positives = 206/259 (79%), Gaps = 1/259 (0%) Query: 1 MKNSGKVVAITGAARGIGKACAARFLADGARVVISDVDAAGLVHTAQELGHIDQLRAVEA 60 M+ + KV +TGAARGIG+ACA RFLA+GA++V+ D+DA L A E+G D + AV Sbjct: 1 MRQAEKVAVVTGAARGIGRACAERFLAEGAKLVLGDIDAPELRKCAAEIGTPDSVLAVVT 60 Query: 61 DVSKRADVDRIVAHAVKEFGRLDVMVNNAGVARNRDFLDISEAEFDDVMGINLKGAFFGV 120 DVSK+ VD +VA AV +FGR+D+MVNNAG+A +DFLD++EA++D V+ +NLKGAF G Sbjct: 61 DVSKKEQVDGLVAAAVAKFGRVDIMVNNAGIAPVQDFLDVTEADYDRVLAVNLKGAFLGT 120 Query: 121 QAAARQMIAQGSGGVVINMSSVNALLAIPSLATYAMSKGALKQLTSVAAVALAPHGIRVV 180 QAAARQMIAQG GV+INMSS+N+ LA P +ATYA+SKG + Q+TS AAVA APHGIRVV Sbjct: 121 QAAARQMIAQGGAGVIINMSSINSGLANPRVATYAISKGGMNQVTSTAAVAFAPHGIRVV 180 Query: 181 AVGPGTILTEMVATAIF-SSEDARRSVLSRTPAGRCGEPSEVASVVAFLASNDASYITGQ 239 VGPGTI T+MV F SE+ RR+VLSRTP GR G +E+ASVVAFLAS+DASYITG+ Sbjct: 181 GVGPGTIATDMVMDGTFIDSEEMRRAVLSRTPLGRLGTAAEIASVVAFLASDDASYITGE 240 Query: 240 TIYPDGGRLILNYTVPVSE 258 TIYPDGGR +LNYTVP+ E Sbjct: 241 TIYPDGGRRVLNYTVPIKE 259 >ref|ZP_01743609.1| dehydrogenase [Rhodobacterales bacterium HTCC2150] gb|EBA02009.1| dehydrogenase [Rhodobacterales bacterium HTCC2150] Length = 279 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 153/260 (58%), Positives = 202/260 (77%), Gaps = 1/260 (0%) Query: 1 MKNSGKVVAITGAARGIGKACAARFLADGARVVISDVDAAGLVHTAQELGHID-QLRAVE 59 MK K V +TGAA+G+G ACA RFL DGA VV++DV+A L + Q+L D + ++ Sbjct: 20 MKLKNKTVIVTGAAQGLGYACALRFLQDGANVVMADVNAEKLAESVQDLIEFDGAVSSMV 79 Query: 60 ADVSKRADVDRIVAHAVKEFGRLDVMVNNAGVARNRDFLDISEAEFDDVMGINLKGAFFG 119 DV+KR ++ +V AV +G LDVM+NNAG+A+ +DFL+IS+ E+D VM +NL+GAF G Sbjct: 80 CDVTKRENLQALVGLAVSNYGNLDVMINNAGIAKVQDFLEISDDEYDAVMDVNLRGAFIG 139 Query: 120 VQAAARQMIAQGSGGVVINMSSVNALLAIPSLATYAMSKGALKQLTSVAAVALAPHGIRV 179 Q A +QMIAQG GGV+INMSS+NAL+A P L+TYA+SKG + QLT++AAV LAPH IRV Sbjct: 140 TQIAGKQMIAQGKGGVIINMSSINALVANPMLSTYAISKGGMNQLTNIAAVGLAPHNIRV 199 Query: 180 VAVGPGTILTEMVATAIFSSEDARRSVLSRTPAGRCGEPSEVASVVAFLASNDASYITGQ 239 +GPGTILT+MVA I +S +AR +VLSRTP RCGEP E+ASV AFLAS+DASY+TGQ Sbjct: 200 CGIGPGTILTDMVADVIMTSPEARHNVLSRTPMERCGEPREIASVAAFLASDDASYMTGQ 259 Query: 240 TIYPDGGRLILNYTVPVSEK 259 T+YPDGGR+ L+Y++PV ++ Sbjct: 260 TVYPDGGRMALHYSIPVKDE 279 >ref|YP_004611369.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium opportunistum WSM2075] gb|AEH87275.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium opportunistum WSM2075] Length = 266 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 153/263 (58%), Positives = 196/263 (74%), Gaps = 10/263 (3%) Query: 1 MKNSGKVVAITGAARGIGKACAARFLADGARVVISDVDAAGLVHTAQELGHIDQLRAVEA 60 +K++GKVV +TGAA+G+G ACA RF ADGA+VV+ DV A A+ LG ++ + A Sbjct: 9 VKHAGKVVIVTGAAQGLGLACAERFHADGAKVVLVDVQADRGREHAERLG--ERAAWLSA 66 Query: 61 DVSK-----RADVDRIVAHAVKEFGRLDVMVNNAGVARNRDFLDISEAEFDDVMGINLKG 115 D+S+ ADV VA A + FG +DV++NNAG+ DF+D E FD V +NLK Sbjct: 67 DLSECTQEMAADV---VAKATERFGGVDVLINNAGIIHLDDFVDFPEEAFDLVQRVNLKA 123 Query: 116 AFFGVQAAARQMIAQGSGGVVINMSSVNALLAIPSLATYAMSKGALKQLTSVAAVALAPH 175 F QAAAR MIAQG GG +INMSS+NA+LAIP+ YA+SKG +KQLT+V AV L PH Sbjct: 124 PFLLGQAAARAMIAQGRGGSIINMSSINAILAIPNSVAYAVSKGGIKQLTAVMAVGLIPH 183 Query: 176 GIRVVAVGPGTILTEMVATAIFSSEDARRSVLSRTPAGRCGEPSEVASVVAFLASNDASY 235 IRV A+GPGTILT+MV +++ +SE R+++LSRTP+GRCGEPSE+ASV +FLAS+DASY Sbjct: 184 NIRVNAIGPGTILTDMVKSSVMASEAQRQTILSRTPSGRCGEPSEIASVASFLASDDASY 243 Query: 236 ITGQTIYPDGGRLILNYTVPVSE 258 I GQTIYPDGGRLILNYT+PV + Sbjct: 244 IVGQTIYPDGGRLILNYTMPVKD 266