BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0198.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238227.1| galactose 1-dehydrogenase [Bradyrhizobium sp... 405 e-111 ref|YP_001203923.1| galactose 1-dehydrogenase [Bradyrhizobium sp... 399 e-109 ref|YP_001834127.1| galactose 1-dehydrogenase [Beijerinckia indi... 399 e-109 ref|NP_769845.1| dehydrogenase [Bradyrhizobium japonicum USDA 11... 382 e-104 ref|YP_003692073.1| oxidoreductase domain-containing protein [St... 360 2e-97 >ref|YP_001238227.1| galactose 1-dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ34321.1| galactose 1-dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 308 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 204/305 (66%), Positives = 231/305 (75%) Query: 5 LRIAIVGYGEIACRQHVPAIAKTSGVALVAVADPVKTPPGLPHFRDLQELLRDGPEIDAV 64 LR+AIVG+G+IA QHVPAIA T GV L AVA + PGLPHF ++ELLRDGPEIDAV Sbjct: 4 LRVAIVGFGKIARDQHVPAIAATEGVTLTAVASRNASLPGLPHFGSIEELLRDGPEIDAV 63 Query: 65 ALCTPPQMRHAQAAAALASGKHVLLEKPPGTTLSELTPLITAAQEAGRTLFAAWHSGYAA 124 ALCTPPQ+R AQA AAL +GKHV+LEKPPG ++EL PLI A RTLFA WHS YA Sbjct: 64 ALCTPPQVRRAQAQAALEAGKHVMLEKPPGAAVTELDPLIALANARQRTLFATWHSRYAP 123 Query: 125 AVGPARQLLAGRTINKVTIIWKEDVRVWHPGQAWIFEAGGFGVFDPGINALSILTEILPR 184 AV PAR L+ R I V I WKEDVRVWHPGQAWI+E GG GVFDPGINALSILT ILP Sbjct: 124 AVEPARTWLSSRQIRSVRIDWKEDVRVWHPGQAWIWEPGGLGVFDPGINALSILTRILPE 183 Query: 185 AVFVRSAALDFPSNREAPIAAEIELSDAGGLPIHAEFDFRQTGSPSWDILCETDAGPVTL 244 VF+ A L FPSNR+APIAA + L+ A LPI AEFDFRQTG SWDI ETDAG + L Sbjct: 184 PVFLTEAELSFPSNRQAPIAANLSLTTASDLPIAAEFDFRQTGPQSWDIRIETDAGQLKL 243 Query: 245 SKGGRQLRDGGRLVVDAPDEEYPALYRRFVALTSEGKSDVDLAPLRLVADSFMLGRRRLV 304 S GG ++ ++++D + EYP LYRRFVALT G SDVDLAPLRLVAD+F+LGRR V Sbjct: 244 SLGGARMSRDDQVMIDEKEREYPGLYRRFVALTKTGASDVDLAPLRLVADAFLLGRRNFV 303 Query: 305 EAFED 309 E FED Sbjct: 304 EPFED 308 >ref|YP_001203923.1| galactose 1-dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL75686.1| Galactose 1-dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 308 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/305 (66%), Positives = 229/305 (75%) Query: 5 LRIAIVGYGEIACRQHVPAIAKTSGVALVAVADPVKTPPGLPHFRDLQELLRDGPEIDAV 64 LR+AIVG+G+IA QHVPAIA T GV L AVA + PGLPHF ++ELLRDGPEIDAV Sbjct: 4 LRVAIVGFGKIARDQHVPAIAATEGVTLTAVASRNASLPGLPHFGSIEELLRDGPEIDAV 63 Query: 65 ALCTPPQMRHAQAAAALASGKHVLLEKPPGTTLSELTPLITAAQEAGRTLFAAWHSGYAA 124 +LCTPPQ+R AQA AL +GKHV+LEKPPG +SEL PLI A RTLFA WHS YA Sbjct: 64 SLCTPPQVRRAQALVALEAGKHVMLEKPPGAAVSELDPLIALAANKQRTLFATWHSRYAP 123 Query: 125 AVGPARQLLAGRTINKVTIIWKEDVRVWHPGQAWIFEAGGFGVFDPGINALSILTEILPR 184 AV PAR+ LA R I V I WKEDVRVWHPGQAWI+E GG GVFDPGINALSILT ILP Sbjct: 124 AVEPAREWLASREIRSVRIDWKEDVRVWHPGQAWIWEPGGLGVFDPGINALSILTRILPE 183 Query: 185 AVFVRSAALDFPSNREAPIAAEIELSDAGGLPIHAEFDFRQTGSPSWDILCETDAGPVTL 244 VFV A L FPSN +APIAA + +S A LPI AEFDFRQTG SWDI ETDAG + L Sbjct: 184 PVFVTEAELAFPSNCQAPIAANLSMSTASDLPIAAEFDFRQTGPQSWDIRIETDAGQLKL 243 Query: 245 SKGGRQLRDGGRLVVDAPDEEYPALYRRFVALTSEGKSDVDLAPLRLVADSFMLGRRRLV 304 S GG ++ +++VD + EYP LY RFV LT G SDVDLAPLRLVAD+F+LGRR +V Sbjct: 244 SLGGARMSADDQVMVDEKEREYPGLYHRFVELTKSGTSDVDLAPLRLVADAFLLGRRAVV 303 Query: 305 EAFED 309 E FED Sbjct: 304 EPFED 308 >ref|YP_001834127.1| galactose 1-dehydrogenase [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB96638.1| Galactose 1-dehydrogenase [Beijerinckia indica subsp. indica ATCC 9039] Length = 323 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/305 (65%), Positives = 235/305 (77%) Query: 5 LRIAIVGYGEIACRQHVPAIAKTSGVALVAVADPVKTPPGLPHFRDLQELLRDGPEIDAV 64 +R+AIVG+G+IA QHVPAIA T G+AL A+A G+P+F+ L LL +GP+IDAV Sbjct: 19 IRLAIVGFGKIARDQHVPAIATTPGIALTAIASHDGGLEGIPYFKTLDHLLSEGPQIDAV 78 Query: 65 ALCTPPQMRHAQAAAALASGKHVLLEKPPGTTLSELTPLITAAQEAGRTLFAAWHSGYAA 124 ALCTPPQ+R AQA ALA+GKHVLLEKPPG T+SE+ PL+ AQ AGRTLFA WHS +A Sbjct: 79 ALCTPPQVRRAQAEVALAAGKHVLLEKPPGATVSEIAPLVAQAQRAGRTLFATWHSRFAP 138 Query: 125 AVGPARQLLAGRTINKVTIIWKEDVRVWHPGQAWIFEAGGFGVFDPGINALSILTEILPR 184 AV PAR LA RT+ VTI WKEDVR+WHPGQAWI+E GG GVFDPGINALSILTEILPR Sbjct: 139 AVEPARAFLAERTLRAVTIAWKEDVRIWHPGQAWIWEPGGLGVFDPGINALSILTEILPR 198 Query: 185 AVFVRSAALDFPSNREAPIAAEIELSDAGGLPIHAEFDFRQTGSPSWDILCETDAGPVTL 244 +F+ A L FP+NR APIAA+++ SD GL IHAEFDFRQTG SWDIL ET G + L Sbjct: 199 PIFLTRAELAFPANRAAPIAADLDFSDTNGLAIHAEFDFRQTGPQSWDILVETADGVLVL 258 Query: 245 SKGGRQLRDGGRLVVDAPDEEYPALYRRFVALTSEGKSDVDLAPLRLVADSFMLGRRRLV 304 SKGG +L G+ +V+ P+ EY +YRRFV L + G SDVDL PL+ VAD+FMLGRR LV Sbjct: 259 SKGGAELAHDGKKLVETPEAEYRGIYRRFVELIAGGMSDVDLVPLQHVADAFMLGRRTLV 318 Query: 305 EAFED 309 E FED Sbjct: 319 EPFED 323 >ref|NP_769845.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC48470.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 203/309 (65%), Positives = 236/309 (76%), Gaps = 1/309 (0%) Query: 1 MSDLLRIAIVGYGEIACRQHVPAIAKTSGVALVAVADPVKTPPGLPHFRDLQELLRDGPE 60 M+DL RIAIVG+G+IA QHV AIA G L AVA + P LPHF ++ELL GP Sbjct: 1 MTDL-RIAIVGFGKIARDQHVGAIAAVPGATLAAVASRNASLPELPHFATIEELLEKGPA 59 Query: 61 IDAVALCTPPQMRHAQAAAALASGKHVLLEKPPGTTLSELTPLITAAQEAGRTLFAAWHS 120 IDAV+LCTPPQ+R AQAA ALA+GKHV+LEKPPGT ++EL PL+ A +A RTLFA WHS Sbjct: 60 IDAVSLCTPPQVRRAQAATALAAGKHVMLEKPPGTGVAELDPLVAMAADARRTLFATWHS 119 Query: 121 GYAAAVGPARQLLAGRTINKVTIIWKEDVRVWHPGQAWIFEAGGFGVFDPGINALSILTE 180 YA AV PAR+ LA R I V I WKEDVRVWHPGQAWI+E GG GVFDPGINALSILT Sbjct: 120 RYAPAVEPAREWLATRRIKSVHINWKEDVRVWHPGQAWIWEPGGLGVFDPGINALSILTR 179 Query: 181 ILPRAVFVRSAALDFPSNREAPIAAEIELSDAGGLPIHAEFDFRQTGSPSWDILCETDAG 240 ILP+ VFV +A L FP+N +APIAA + L+D GGLP+ AEFDFRQTG SWDIL ETD G Sbjct: 180 ILPKPVFVTAAELAFPANCQAPIAANLTLTDIGGLPVTAEFDFRQTGPQSWDILVETDQG 239 Query: 241 PVTLSKGGRQLRDGGRLVVDAPDEEYPALYRRFVALTSEGKSDVDLAPLRLVADSFMLGR 300 + LS GGR++ G+ + +APD+EY LYRRFV L + G SDVDLAPLRLVADSF+LGR Sbjct: 240 RMNLSGGGRRMAVDGKAIAEAPDQEYRELYRRFVELAATGASDVDLAPLRLVADSFLLGR 299 Query: 301 RRLVEAFED 309 R +VE F D Sbjct: 300 RTIVEPFVD 308 >ref|YP_003692073.1| oxidoreductase domain-containing protein [Starkeya novella DSM 506] gb|ADH87454.1| oxidoreductase domain protein [Starkeya novella DSM 506] Length = 308 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 191/304 (62%), Positives = 224/304 (73%) Query: 5 LRIAIVGYGEIACRQHVPAIAKTSGVALVAVADPVKTPPGLPHFRDLQELLRDGPEIDAV 64 +R+AIVG G+IA QH+PAIA T G+ L AVA G+ HF L +LL D +IDAV Sbjct: 4 IRLAIVGLGKIARDQHIPAIAATEGIELAAVASRNAALDGVAHFATLDDLLADSADIDAV 63 Query: 65 ALCTPPQMRHAQAAAALASGKHVLLEKPPGTTLSELTPLITAAQEAGRTLFAAWHSGYAA 124 ALCTPPQ+R AQA AALA+GKHVLLEKPPG T+SEL PL+ AA+ +GRTLFA WHS +A Sbjct: 64 ALCTPPQVRRAQAEAALAAGKHVLLEKPPGATVSELGPLVAAAEASGRTLFATWHSRFAP 123 Query: 125 AVGPARQLLAGRTINKVTIIWKEDVRVWHPGQAWIFEAGGFGVFDPGINALSILTEILPR 184 AV PAR LA R I V I WKEDVRVWHPGQ WI+E GG GVFDP INALSILT+ILPR Sbjct: 124 AVEPARTFLAERAIRSVIIEWKEDVRVWHPGQEWIWEPGGLGVFDPAINALSILTQILPR 183 Query: 185 AVFVRSAALDFPSNREAPIAAEIELSDAGGLPIHAEFDFRQTGSPSWDILCETDAGPVTL 244 VFV A L FP+NR+APIAAE+ LSD G+PI AE DF QTG +WDI ET+AG + L Sbjct: 184 PVFVTKAHLAFPTNRDAPIAAELGLSDVAGIPIRAELDFLQTGPQTWDIRIETEAGQIVL 243 Query: 245 SKGGRQLRDGGRLVVDAPDEEYPALYRRFVALTSEGKSDVDLAPLRLVADSFMLGRRRLV 304 S GG +L G ++VD + EY +Y RFV L G+SDVDLAPL LVAD+F+LGRR + Sbjct: 244 SSGGARLVHDGAVLVDEKEAEYRGIYARFVELVRGGRSDVDLAPLALVADAFLLGRRSIA 303 Query: 305 EAFE 308 E FE Sbjct: 304 EPFE 307