BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0197.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_485273.1| histone deacetylase superfamily protein [Rhodop... 585 e-165 ref|NP_768874.1| acetylpolyamine aminohydrolase [Bradyrhizobium ... 557 e-156 ref|YP_001203687.1| acetylpolyamine aminohydrolase [Bradyrhizobi... 554 e-156 ref|YP_001242299.1| acetylpolyamine aminohydrolase [Bradyrhizobi... 543 e-152 ref|YP_002496799.1| histone deacetylase superfamily protein [Met... 498 e-139 >ref|YP_485273.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris HaA2] gb|ABD06362.1| Histone deacetylase superfamily [Rhodopseudomonas palustris HaA2] Length = 341 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 281/341 (82%), Positives = 303/341 (88%) Query: 1 VKAVYSDLHRSHDPQFFLVRGVVQRTTEQPERADRLLAGLKAGKHTLIEPTRFGQGPRAR 60 +KAVYS+LHRSHDPQFFLVRG+VQRTTEQPERADRLLAGLKAG H+L+EPT FGQGPRAR Sbjct: 1 MKAVYSELHRSHDPQFFLVRGIVQRTTEQPERADRLLAGLKAGGHSLVEPTAFGQGPRAR 60 Query: 61 VHSPEYLSFLADAWDEWSALGNAGPEMIANIHPVRNAGTYPAHIVGKLGWHTMDTAAPIG 120 VHSPEYL FLA+AWD W+ALGN+GPEMIANIHPVRN TYP HIVG+LGWHT+DT+ PIG Sbjct: 61 VHSPEYLGFLAEAWDAWAALGNSGPEMIANIHPVRNEATYPTHIVGRLGWHTIDTSCPIG 120 Query: 121 PGTWAGACAASDVAVSAAQMVLDGEDAVYALCRPPGHHAYRDLAGGFCFLNNSAIAAEHL 180 PGTWA CAA+DVA SAAQ+V+DGEDA YALCRPPGHHAYRDLA GFCFLNNSAIAA HL Sbjct: 121 PGTWAAVCAATDVATSAAQLVMDGEDAAYALCRPPGHHAYRDLASGFCFLNNSAIAAAHL 180 Query: 181 RQKHERVAILDVDVHHGNGTQGIFYERGDVFTVSIHADPSFFYPFVWGHAHERGAGGGLG 240 R KHERVAILDVDVHHGNGTQGIFYER DV TVSIHADP+FF PFVWG+AHERGAG GLG Sbjct: 181 RLKHERVAILDVDVHHGNGTQGIFYERPDVLTVSIHADPTFFNPFVWGYAHERGAGPGLG 240 Query: 241 TNLNIPLAKGTGDDDYMKALAAAEKAIRSFAPTALVVALGLDASEKDPLAGLAVTTGGFR 300 NLNIPLAKGT DD Y++AL AEK IR+FAP ALVVALGLDASE DPLAGLAVTT GF Sbjct: 241 ANLNIPLAKGTDDDGYIEALGVAEKTIRAFAPGALVVALGLDASEHDPLAGLAVTTDGFH 300 Query: 301 RIGEGLARFGLPTVLVQEGGYLSDILGANLTAVLGGFEAAR 341 RIG +AR GLPTV VQEGGYLS+ILG NLT+ L GFE R Sbjct: 301 RIGGAIARLGLPTVFVQEGGYLSEILGPNLTSALAGFEQVR 341 >ref|NP_768874.1| acetylpolyamine aminohydrolase [Bradyrhizobium japonicum USDA 110] dbj|BAC47499.1| aph [Bradyrhizobium japonicum USDA 110] Length = 341 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 277/341 (81%), Positives = 306/341 (89%) Query: 1 VKAVYSDLHRSHDPQFFLVRGVVQRTTEQPERADRLLAGLKAGKHTLIEPTRFGQGPRAR 60 +KAV+++LHRSHDPQFFLVRGVV+RTTEQPERADRLL GLK GKH L+EPT FGQGPRAR Sbjct: 1 MKAVHTELHRSHDPQFFLVRGVVKRTTEQPERADRLLKGLKDGKHQLVEPTTFGQGPRAR 60 Query: 61 VHSPEYLSFLADAWDEWSALGNAGPEMIANIHPVRNAGTYPAHIVGKLGWHTMDTAAPIG 120 +HSPEYLSFL++AWD W+ALG++GPEMI NIHPVR+A TYP HIVGKLGWHT DTAAPIG Sbjct: 61 IHSPEYLSFLSEAWDAWTALGDSGPEMIGNIHPVRHAATYPTHIVGKLGWHTADTAAPIG 120 Query: 121 PGTWAGACAASDVAVSAAQMVLDGEDAVYALCRPPGHHAYRDLAGGFCFLNNSAIAAEHL 180 PGTWA ACAA+DVAV+AAQMV+DGEDA YALCRPPGHHAYRD+AGGFCFLNNSAIAA HL Sbjct: 121 PGTWAAACAATDVAVTAAQMVMDGEDATYALCRPPGHHAYRDMAGGFCFLNNSAIAAAHL 180 Query: 181 RQKHERVAILDVDVHHGNGTQGIFYERGDVFTVSIHADPSFFYPFVWGHAHERGAGGGLG 240 R KHERV ILDVDVHHGNGTQGIFY R DV+TVSIHADP +YP+VWG+AHERG G GLG Sbjct: 181 RLKHERVVILDVDVHHGNGTQGIFYARPDVYTVSIHADPVAYYPYVWGYAHERGEGPGLG 240 Query: 241 TNLNIPLAKGTGDDDYMKALAAAEKAIRSFAPTALVVALGLDASEKDPLAGLAVTTGGFR 300 TNLNIPLA GTGDD Y++A+ A KAI SFAP ALV+ALGLDASE DPL GLAVTT GFR Sbjct: 241 TNLNIPLAIGTGDDGYIQAMDVARKAIESFAPGALVIALGLDASEHDPLKGLAVTTPGFR 300 Query: 301 RIGEGLARFGLPTVLVQEGGYLSDILGANLTAVLGGFEAAR 341 RIG+ +AR GLPTV VQEGGYLS+ILGANLT+VL GFE AR Sbjct: 301 RIGQAIARMGLPTVFVQEGGYLSEILGANLTSVLAGFEEAR 341 >ref|YP_001203687.1| acetylpolyamine aminohydrolase [Bradyrhizobium sp. ORS 278] emb|CAL75450.1| Acetylpolyamine aminohydrolase (Histone deacetylase family) [Bradyrhizobium sp. ORS 278] Length = 374 Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust. Identities = 270/341 (79%), Positives = 299/341 (87%) Query: 1 VKAVYSDLHRSHDPQFFLVRGVVQRTTEQPERADRLLAGLKAGKHTLIEPTRFGQGPRAR 60 VKAVY++LHRSHDPQF+LVRGV++RTTEQPERADRLLAGLKAG H L+ P +FGQ RAR Sbjct: 34 VKAVYTELHRSHDPQFYLVRGVIKRTTEQPERADRLLAGLKAGNHELVAPIQFGQEARAR 93 Query: 61 VHSPEYLSFLADAWDEWSALGNAGPEMIANIHPVRNAGTYPAHIVGKLGWHTMDTAAPIG 120 VHSPEYL+FL +AWD W+AL +AG EMI N+HPVRNA TYP HIVG+LGWHT DT+APIG Sbjct: 94 VHSPEYLNFLEEAWDAWAALSDAGSEMIPNMHPVRNAATYPTHIVGRLGWHTTDTSAPIG 153 Query: 121 PGTWAGACAASDVAVSAAQMVLDGEDAVYALCRPPGHHAYRDLAGGFCFLNNSAIAAEHL 180 PGTWAGACAA+DVA SAAQ++LDGEDAVYALCRPPGHHAYRD+A GFCF+NNSAIAA HL Sbjct: 154 PGTWAGACAATDVAASAAQLLLDGEDAVYALCRPPGHHAYRDIASGFCFMNNSAIAAAHL 213 Query: 181 RQKHERVAILDVDVHHGNGTQGIFYERGDVFTVSIHADPSFFYPFVWGHAHERGAGGGLG 240 RQ+HERVAILDVDVHHGNGTQGIFYER DV T+SIHADP+ +YPFVWG+AHERGAG GLG Sbjct: 214 RQRHERVAILDVDVHHGNGTQGIFYERPDVLTISIHADPTHYYPFVWGYAHERGAGAGLG 273 Query: 241 TNLNIPLAKGTGDDDYMKALAAAEKAIRSFAPTALVVALGLDASEKDPLAGLAVTTGGFR 300 NLNIPLA +GDD Y+KA A K I +FAP ALVVALGLDASE DPL GL+VTT GFR Sbjct: 274 ANLNIPLALKSGDDTYLKAFETAAKTIHAFAPGALVVALGLDASEHDPLKGLSVTTPGFR 333 Query: 301 RIGEGLARFGLPTVLVQEGGYLSDILGANLTAVLGGFEAAR 341 RIG +AR GLPTV VQEGGYLSDILG NLTAVL GFE AR Sbjct: 334 RIGAAIARLGLPTVFVQEGGYLSDILGQNLTAVLAGFEEAR 374 >ref|YP_001242299.1| acetylpolyamine aminohydrolase [Bradyrhizobium sp. BTAi1] gb|ABQ38393.1| Acetylpolyamine aminohydrolase (Histone deacetylase family) [Bradyrhizobium sp. BTAi1] Length = 341 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 268/341 (78%), Positives = 300/341 (87%) Query: 1 VKAVYSDLHRSHDPQFFLVRGVVQRTTEQPERADRLLAGLKAGKHTLIEPTRFGQGPRAR 60 +KAVY++LHRSHDPQF+LVRGVV+RTTEQPERADRLLAGLKAG H L+ PT FGQ RAR Sbjct: 1 MKAVYTELHRSHDPQFYLVRGVVKRTTEQPERADRLLAGLKAGNHELVAPTHFGQEARAR 60 Query: 61 VHSPEYLSFLADAWDEWSALGNAGPEMIANIHPVRNAGTYPAHIVGKLGWHTMDTAAPIG 120 VHSPEYL+FL +AW+ W+ALG+AG EMI N+HPVR+A TYP HIVG+LGWHT+DT+APIG Sbjct: 61 VHSPEYLNFLEEAWEAWAALGDAGTEMIPNMHPVRHAATYPTHIVGRLGWHTIDTSAPIG 120 Query: 121 PGTWAGACAASDVAVSAAQMVLDGEDAVYALCRPPGHHAYRDLAGGFCFLNNSAIAAEHL 180 PGTW GACAA+DVA +AAQ++LDGEDA YALCRPPGHHAYRD+A GFCF+NNSAIAA HL Sbjct: 121 PGTWEGACAATDVATTAAQLLLDGEDAAYALCRPPGHHAYRDIASGFCFMNNSAIAAAHL 180 Query: 181 RQKHERVAILDVDVHHGNGTQGIFYERGDVFTVSIHADPSFFYPFVWGHAHERGAGGGLG 240 RQ+HERVAILDVDVHHGNGTQGIFYER DV T+SIHADP+ +YPFVWG+AHERGAG GLG Sbjct: 181 RQRHERVAILDVDVHHGNGTQGIFYERPDVLTISIHADPAHYYPFVWGYAHERGAGAGLG 240 Query: 241 TNLNIPLAKGTGDDDYMKALAAAEKAIRSFAPTALVVALGLDASEKDPLAGLAVTTGGFR 300 NLNIPLA +GDD Y+KA A K I +FAP ALVVALGLDASE DPL GL+VTT GFR Sbjct: 241 ANLNIPLALKSGDDTYLKAFETAAKTIHAFAPGALVVALGLDASEHDPLKGLSVTTPGFR 300 Query: 301 RIGEGLARFGLPTVLVQEGGYLSDILGANLTAVLGGFEAAR 341 RIG +AR GLPTV VQEGGYLSDILG NLTAVL GFEAAR Sbjct: 301 RIGGAIARLGLPTVFVQEGGYLSDILGQNLTAVLAGFEAAR 341 >ref|YP_002496799.1| histone deacetylase superfamily protein [Methylobacterium nodulans ORS 2060] gb|ACL56496.1| histone deacetylase superfamily [Methylobacterium nodulans ORS 2060] Length = 341 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 252/341 (73%), Positives = 283/341 (82%) Query: 1 VKAVYSDLHRSHDPQFFLVRGVVQRTTEQPERADRLLAGLKAGKHTLIEPTRFGQGPRAR 60 +KAVY++ HRSHDPQFFLVRG V RTTEQPERADRLLAGL+AG H+L+EP FG RAR Sbjct: 1 MKAVYTEDHRSHDPQFFLVRGRVTRTTEQPERADRLLAGLRAGGHSLVEPQTFGHEARAR 60 Query: 61 VHSPEYLSFLADAWDEWSALGNAGPEMIANIHPVRNAGTYPAHIVGKLGWHTMDTAAPIG 120 VH P+YL+FLA+AWD W+ALG+A PEM+ANIHP+R+ TYP HIVG+LGWHT+DTA PIG Sbjct: 61 VHGPDYLAFLAEAWDAWAALGDAAPEMVANIHPMRDDATYPEHIVGRLGWHTVDTACPIG 120 Query: 121 PGTWAGACAASDVAVSAAQMVLDGEDAVYALCRPPGHHAYRDLAGGFCFLNNSAIAAEHL 180 PGT+A ACAA+DVA S AQ+V+DGEDA YALCRPPGHHAYRD AGGFCF NNSA+AA L Sbjct: 121 PGTYAAACAATDVAASTAQLVMDGEDAAYALCRPPGHHAYRDRAGGFCFFNNSAVAAALL 180 Query: 181 RQKHERVAILDVDVHHGNGTQGIFYERGDVFTVSIHADPSFFYPFVWGHAHERGAGGGLG 240 R +H RVAILDVDVHHGNGTQGIFY V TVSIHADP+ FYPFVWG+AHERG G GLG Sbjct: 181 RTRHARVAILDVDVHHGNGTQGIFYADPTVLTVSIHADPARFYPFVWGYAHERGEGAGLG 240 Query: 241 TNLNIPLAKGTGDDDYMKALAAAEKAIRSFAPTALVVALGLDASEKDPLAGLAVTTGGFR 300 N N+PL GTGD+ Y+ L A + IR+F +ALVVALGLDAS DPLAGLAVTT GF Sbjct: 241 ANRNLPLPLGTGDEGYLATLDEAARIIRAFGASALVVALGLDASVYDPLAGLAVTTEGFS 300 Query: 301 RIGEGLARFGLPTVLVQEGGYLSDILGANLTAVLGGFEAAR 341 RIG LAR GLPTVLVQEGGYLS+ LG NL AVL GFEAAR Sbjct: 301 RIGAALARLGLPTVLVQEGGYLSEHLGPNLAAVLQGFEAAR 341