BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0188.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774225.1| hypothetical protein blr7585 [Bradyrhizobium ja...   172   2e-41
ref|YP_824528.1| hypothetical protein Acid_3266 [Candidatus Soli...   148   3e-34
ref|ZP_03269089.1| conserved hypothetical protein [Burkholderia ...   140   4e-32
ref|YP_589776.1| hypothetical protein Acid345_0697 [Candidatus K...   132   1e-29
ref|YP_822662.1| hypothetical protein Acid_1384 [Candidatus Soli...    95   3e-18

>ref|NP_774225.1| hypothetical protein blr7585 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52850.1| blr7585 [Bradyrhizobium japonicum USDA 110]
          Length = 152

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 96/117 (82%), Gaps = 5/117 (4%)

Query: 1   MTAPSPAQAQAQAQVASTVTTGVMVILTAKAGVTRDQVMAVMPDEIRQTVQLYLNGKIRE 60
           M  PS AQ+Q  A      TTGVMVILT KAGVTRDQ+MAVMPDEIRQTVQLYLNG +RE
Sbjct: 41  MADPSLAQSQTAAP-----TTGVMVILTVKAGVTRDQIMAVMPDEIRQTVQLYLNGTVRE 95

Query: 61  WYSRSDGRGVVLLLDAKDAAEAHAIMEGLPLSKLDLMDHEYIGVGPLLPLRLLVARP 117
           WYSRSDGRG V LL+ +D AE HAIM+GLPL++ +LMDH+YI VGPL+PL LL+A+P
Sbjct: 96  WYSRSDGRGAVFLLNVRDVAEGHAIMDGLPLARRELMDHDYIAVGPLMPLGLLMAKP 152


>ref|YP_824528.1| hypothetical protein Acid_3266 [Candidatus Solibacter usitatus
           Ellin6076]
 gb|ABJ84243.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 129

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 88/112 (78%)

Query: 3   APSPAQAQAQAQVASTVTTGVMVILTAKAGVTRDQVMAVMPDEIRQTVQLYLNGKIREWY 62
           +P  + AQ+ +  A   TT VMVILTAK GVTR Q+MA+MP EIR+TV+LYL+GKIR+WY
Sbjct: 12  SPVASVAQSPSSAAPPRTTEVMVILTAKEGVTRQQIMAIMPSEIRETVKLYLDGKIRQWY 71

Query: 63  SRSDGRGVVLLLDAKDAAEAHAIMEGLPLSKLDLMDHEYIGVGPLLPLRLLV 114
           SR DG+GV+ L+DAK  AEA A+ME LPLSK  LMD+EYI VGPL+PL  L+
Sbjct: 72  SRGDGKGVIFLIDAKTQAEARAVMETLPLSKEQLMDYEYIPVGPLMPLTALI 123


>ref|ZP_03269089.1| conserved hypothetical protein [Burkholderia sp. H160]
 gb|EDZ99329.1| conserved hypothetical protein [Burkholderia sp. H160]
          Length = 118

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 85/108 (78%), Gaps = 1/108 (0%)

Query: 7   AQAQAQAQVASTVTTGVMVILTAKAGVTRDQVMAVMPDEIRQTVQLYLNGKIREWYSRSD 66
           + A AQ + A T TTGV  +LTAK GVTR+++MA+MP EIR TVQLYL GKIREWY+R D
Sbjct: 5   SHAHAQPKTA-TSTTGVFALLTAKPGVTRERIMAIMPAEIRATVQLYLEGKIREWYARED 63

Query: 67  GRGVVLLLDAKDAAEAHAIMEGLPLSKLDLMDHEYIGVGPLLPLRLLV 114
           GRG V LL+A+D  EA +I+E LP +  +++DHEYI VGPL+PLRLL+
Sbjct: 64  GRGAVFLLNARDLDEATSILESLPPANENMLDHEYIPVGPLMPLRLLL 111


>ref|YP_589776.1| hypothetical protein Acid345_0697 [Candidatus Koribacter versatilis
           Ellin345]
 gb|ABF39702.1| conserved hypothetical protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 136

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 75/96 (78%)

Query: 20  TTGVMVILTAKAGVTRDQVMAVMPDEIRQTVQLYLNGKIREWYSRSDGRGVVLLLDAKDA 79
           TT V+VI T K GVT  Q++AVMPDE+R T QLYL+GKIR+WYSR DGRGVV ++DA   
Sbjct: 36  TTEVLVIETPKQGVTFQQIIAVMPDEVRATAQLYLDGKIRQWYSRGDGRGVVFIIDATSE 95

Query: 80  AEAHAIMEGLPLSKLDLMDHEYIGVGPLLPLRLLVA 115
            EA AI+E LPLSK  L+DH+Y+ +GP +PLR+L+ 
Sbjct: 96  DEAKAIVESLPLSKQQLLDHQYVALGPFMPLRMLIG 131


>ref|YP_822662.1| hypothetical protein Acid_1384 [Candidatus Solibacter usitatus
           Ellin6076]
 gb|ABJ82377.1| conserved hypothetical protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 129

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 61/82 (74%)

Query: 20  TTGVMVILTAKAGVTRDQVMAVMPDEIRQTVQLYLNGKIREWYSRSDGRGVVLLLDAKDA 79
           TT VMV LT K  V R ++M VMP+E+R TV+LYL+GKI++WYS+S G GVV ++++   
Sbjct: 29  TTAVMVRLTVKRDVDRPKLMKVMPEEVRATVRLYLDGKIQQWYSQSSGMGVVFIMNSTSV 88

Query: 80  AEAHAIMEGLPLSKLDLMDHEY 101
           AEA A++ GLPL+K  L D E+
Sbjct: 89  AEAKALINGLPLAKAGLADFEF 110