BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0176.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06888433.1| conserved hypothetical protein [Methylosinus ... 427 e-117 ref|YP_004011626.1| hypothetical protein Rvan_1265 [Rhodomicrobi... 416 e-114 ref|YP_524733.1| hypothetical protein Rfer_3496 [Rhodoferax ferr... 392 e-107 ref|YP_320379.1| hypothetical protein Ava_C0101 [Anabaena variab... 384 e-104 ref|ZP_08628527.1| hypothetical protein CSIRO_1608 [Bradyrhizobi... 374 e-102 >ref|ZP_06888433.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] gb|EFH03070.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] Length = 321 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 207/308 (67%), Positives = 238/308 (77%), Gaps = 1/308 (0%) Query: 9 WPELPTAAWRDSCATLQLFTQIAGKIRLAKSPWLNHSWHVTLYVTARGLTTSPIPDGDRT 68 WPELP WRD+C+TLQL +QI GKIRL+ +PWLNHSWHVTLYVT RGLTTSPIP + Sbjct: 11 WPELPYELWRDTCSTLQLKSQIIGKIRLSHTPWLNHSWHVTLYVTRRGLTTSPIPLREGV 70 Query: 69 FEIDFDFIDHMLRISTSDGTERQFALAGQSVASFYAAVMTNLKDLGIDVAIDEIPNEVAD 128 F+IDFDF+DH+LR+ SD L QSVA F+ VM L DLGI I+E PNE+ D Sbjct: 71 FQIDFDFVDHLLRLEASDARRVDIPLREQSVAEFFVTVMAALADLGIGTKINEWPNEIPD 130 Query: 129 PIRFSQDTQHASYDADAVRRFHQILVNCDRVFKQFRTGFLGKASPVHFFWGSFDLAVTRF 188 IRFS+D H++YD D V RF + LV DRVF+ FRTGF+GK SPVHFFWGSFDLAVTRF Sbjct: 131 RIRFSEDRMHSAYDPDYVNRFWKALVEIDRVFEFFRTGFIGKCSPVHFFWGSFDLAVTRF 190 Query: 189 SGRTAPRHPGGVPHLPDEVAHEAYSHEVSSAGFWPGGGA-IDYPAFYSYAYPEPAGYRGT 247 SGR AP HPGGVP+LPD+V EAYSHEVSSAGFWPGGG ++YPAFYSYAYPEP +R Sbjct: 191 SGRRAPLHPGGVPNLPDKVTREAYSHEVSSAGFWPGGGGPVEYPAFYSYAYPEPERFRDA 250 Query: 248 PVRPDAAFFSEALGEFILPYDAVRTAADPDKALLEFLQSSYEAAAINANWDRAALECAPG 307 VRP+ AF+SE L EFILPY+ VRTA PDK LLEFLQS+YEAAA A+WDRAALEC G Sbjct: 251 VVRPEGAFYSEQLREFILPYEVVRTAESPDKTLLEFLQSTYEAAADGADWDRAALECPLG 310 Query: 308 QPGVVRGI 315 + GV R + Sbjct: 311 EVGVPRIV 318 >ref|YP_004011626.1| hypothetical protein Rvan_1265 [Rhodomicrobium vannielii ATCC 17100] gb|ADP70527.1| hypothetical protein Rvan_1265 [Rhodomicrobium vannielii ATCC 17100] Length = 326 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 205/307 (66%), Positives = 233/307 (75%) Query: 9 WPELPTAAWRDSCATLQLFTQIAGKIRLAKSPWLNHSWHVTLYVTARGLTTSPIPDGDRT 68 WP++P W+D+ ATLQL+ QI GK+RLA +PWLNHSW V LYVT+RGL TSPIP G RT Sbjct: 12 WPDIPYPEWKDTAATLQLWMQIVGKVRLALTPWLNHSWQVPLYVTSRGLDTSPIPYGART 71 Query: 69 FEIDFDFIDHMLRISTSDGTERQFALAGQSVASFYAAVMTNLKDLGIDVAIDEIPNEVAD 128 F+I FDF DH+L I+TS+G+ R+ L Q+VA F A +M L L I V I EIP+E+ + Sbjct: 72 FDIAFDFQDHVLTIATSEGSRRELKLEPQTVADFQARLMETLGSLNIAVNIYEIPSEIPN 131 Query: 129 PIRFSQDTQHASYDADAVRRFHQILVNCDRVFKQFRTGFLGKASPVHFFWGSFDLAVTRF 188 I F D H +YD DA RF + LV DRVFK FRTGF+GK SPVHFFWGSFDLAVTRF Sbjct: 132 AIPFRDDRIHRAYDRDAAHRFWRALVQVDRVFKLFRTGFIGKCSPVHFFWGSFDLAVTRF 191 Query: 189 SGRTAPRHPGGVPHLPDEVAHEAYSHEVSSAGFWPGGGAIDYPAFYSYAYPEPAGYRGTP 248 SGR AP HPGGVP + D+V EAYSHEVSSAGFWPGG IDYPAFYSYAYP P ++ P Sbjct: 192 SGRRAPLHPGGVPGVSDDVTREAYSHEVSSAGFWPGGNGIDYPAFYSYAYPTPDDFKRQP 251 Query: 249 VRPDAAFFSEALGEFILPYDAVRTAADPDKALLEFLQSSYEAAAINANWDRAALECAPGQ 308 V PDAAFFSEALGEF+LPYDAVRTAA PD LL FLQSSYEAAA A WDR ALEC GQ Sbjct: 252 VEPDAAFFSEALGEFLLPYDAVRTAAAPDSTLLVFLQSSYEAAATTARWDREALECPLGQ 311 Query: 309 PGVVRGI 315 PGV R + Sbjct: 312 PGVPRPL 318 >ref|YP_524733.1| hypothetical protein Rfer_3496 [Rhodoferax ferrireducens T118] gb|ABD71202.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 315 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/302 (64%), Positives = 216/302 (71%) Query: 2 TNTQKTRWPELPTAAWRDSCATLQLFTQIAGKIRLAKSPWLNHSWHVTLYVTARGLTTSP 61 + T + WP L AAW+D+CATL L+TQI GKIRL ++PWLNHSWHV LYVTARGLTTSP Sbjct: 9 SGTNSSPWPALDYAAWKDTCATLHLWTQIVGKIRLTQTPWLNHSWHVPLYVTARGLTTSP 68 Query: 62 IPDGDRTFEIDFDFIDHMLRISTSDGTERQFALAGQSVASFYAAVMTNLKDLGIDVAIDE 121 +P G RTF+IDFD IDH L I TSDG L + VA FY +M L LG+DV I Sbjct: 69 MPFGARTFQIDFDLIDHRLLIETSDGAVTTLPLKPRPVADFYRDLMAQLAALGLDVRIHT 128 Query: 122 IPNEVADPIRFSQDTQHASYDADAVRRFHQILVNCDRVFKQFRTGFLGKASPVHFFWGSF 181 PNE+ D I F QD QHASYDA F LV DRV KQFR GF+GK SPVHFFWGSF Sbjct: 129 TPNEIVDGIPFEQDQQHASYDAAQAHNFWLALVQSDRVLKQFRAGFIGKCSPVHFFWGSF 188 Query: 182 DLAVTRFSGRTAPRHPGGVPHLPDEVAHEAYSHEVSSAGFWPGGGAIDYPAFYSYAYPEP 241 DLAVTRFSGRTAP+HPGGVPH PD V EAYSHEVSS GFWPGG + P FY+YAYPEP Sbjct: 189 DLAVTRFSGRTAPQHPGGVPHCPDWVMREAYSHEVSSCGFWPGGEMLPEPLFYAYAYPEP 248 Query: 242 AGYRGTPVRPDAAFFSEALGEFILPYDAVRTAADPDKALLEFLQSSYEAAAINANWDRAA 301 G+ VRP A ++ L EFILPYD VR A PD LLEFLQSSY+AAA WDRAA Sbjct: 249 PGFNAAAVRPAGARYNPDLHEFILPYDEVRRADAPDTRLLEFLQSSYDAAANLGTWDRAA 308 Query: 302 LE 303 LE Sbjct: 309 LE 310 >ref|YP_320379.1| hypothetical protein Ava_C0101 [Anabaena variabilis ATCC 29413] gb|ABA25190.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 313 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/298 (61%), Positives = 223/298 (74%) Query: 9 WPELPTAAWRDSCATLQLFTQIAGKIRLAKSPWLNHSWHVTLYVTARGLTTSPIPDGDRT 68 WP LP AAW+D+ ATL L+TQ+ GKIRLA +P LNH W TLYVT RGLTT+ IP G R Sbjct: 14 WPSLPLAAWQDTYATLHLWTQVIGKIRLALAPKLNHWWQSTLYVTPRGLTTASIPCGTRN 73 Query: 69 FEIDFDFIDHMLRISTSDGTERQFALAGQSVASFYAAVMTNLKDLGIDVAIDEIPNEVAD 128 F+I FDF+DH L+I TSDG ++ ALA +SVA FY V+T L D+GI+V I +P EV++ Sbjct: 74 FQISFDFLDHQLQIDTSDGITKRIALAPRSVADFYQMVLTTLSDIGIEVRIWTMPQEVSE 133 Query: 129 PIRFSQDTQHASYDADAVRRFHQILVNCDRVFKQFRTGFLGKASPVHFFWGSFDLAVTRF 188 PI F QD QHA+YD + +RF +ILV DR+ FR+ F+GK+SPVHFFWGSFDLAVTRF Sbjct: 134 PIPFDQDYQHAAYDPEYAQRFWRILVQVDRIMTLFRSQFIGKSSPVHFFWGSFDLAVTRF 193 Query: 189 SGRTAPRHPGGVPHLPDEVAHEAYSHEVSSAGFWPGGGAIDYPAFYSYAYPEPAGYRGTP 248 SGR AP HPGGVP++ D V EAYSHEVSS GFWPGGG++ P FY+YAYP P G+R P Sbjct: 194 SGRRAPEHPGGVPNMADWVTREAYSHEVSSCGFWPGGGSVVEPVFYAYAYPAPEGFRDYP 253 Query: 249 VRPDAAFFSEALGEFILPYDAVRTAADPDKALLEFLQSSYEAAAINANWDRAALECAP 306 ++P AF+S + EFILPY+AVR A DPD LL F QS+YEAAA +WDR LE +P Sbjct: 254 IQPREAFYSSQMQEFILPYEAVRQADDPDAMLLAFFQSTYEAAANLGHWDRVVLERSP 311 >ref|ZP_08628527.1| hypothetical protein CSIRO_1608 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08851.1| hypothetical protein CSIRO_1608 [Bradyrhizobiaceae bacterium SG-6C] Length = 310 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/295 (62%), Positives = 213/295 (72%) Query: 9 WPELPTAAWRDSCATLQLFTQIAGKIRLAKSPWLNHSWHVTLYVTARGLTTSPIPDGDRT 68 WP LP W+D+C TL ++ QI GKIRLA+ P LN W V LYVTA GLTTSP+P R+ Sbjct: 15 WPALPYIGWQDTCTTLHMWMQIVGKIRLAQEPMLNQWWQVPLYVTATGLTTSPMPYQSRS 74 Query: 69 FEIDFDFIDHMLRISTSDGTERQFALAGQSVASFYAAVMTNLKDLGIDVAIDEIPNEVAD 128 F+IDFDF H L I TSD R+FAL VA FY +M L+DLGI+V I +P EVAD Sbjct: 75 FQIDFDFCHHALVIRTSDPQHREFALVPMPVADFYDRIMQTLRDLGIEVKIWTMPVEVAD 134 Query: 129 PIRFSQDTQHASYDADAVRRFHQILVNCDRVFKQFRTGFLGKASPVHFFWGSFDLAVTRF 188 I F +D QH SYDADA +RF ++LV DR+ KQFR GF+GK SPVHFFWGSFDLAVTRF Sbjct: 135 AIPFERDHQHKSYDADAAQRFWRVLVQADRIMKQFRAGFIGKVSPVHFFWGSFDLAVTRF 194 Query: 189 SGRTAPRHPGGVPHLPDEVAHEAYSHEVSSAGFWPGGGAIDYPAFYSYAYPEPAGYRGTP 248 SGRTAP HPGG+P+L D VA EAYSHEVSS GFWPG G AFYSYAYP P G+ P Sbjct: 195 SGRTAPPHPGGMPNLGDWVAREAYSHEVSSCGFWPGNGGFGKAAFYSYAYPAPPGFADAP 254 Query: 249 VRPDAAFFSEALGEFILPYDAVRTAADPDKALLEFLQSSYEAAAINANWDRAALE 303 +RP A F ALGEFIL Y+ VR + DPD +L+FLQS+Y+AAA WDRAALE Sbjct: 255 LRPPQATFDRALGEFILDYETVRLSPDPDAMVLDFLQSTYDAAANAGKWDRAALE 309