BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0169.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774203.1| hypothetical protein bll7563 [Bradyrhizobium ja... 508 e-142 ref|YP_001630856.1| putative secreted protein [Bordetella petrii... 333 2e-89 ref|ZP_06899242.1| conserved hypothetical protein [Roseomonas ce... 311 7e-83 ref|YP_003980549.1| extra-cytoplasmic solute receptor family pro... 307 2e-81 ref|YP_004620610.1| protein bugT [Ramlibacter tataouinensis TTB3... 305 9e-81 >ref|NP_774203.1| hypothetical protein bll7563 [Bradyrhizobium japonicum USDA 110] dbj|BAC52828.1| bll7563 [Bradyrhizobium japonicum USDA 110] Length = 328 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 273/329 (82%), Positives = 297/329 (90%), Gaps = 1/329 (0%) Query: 1 MNRRELLRAAAALPLAQTALANSAFAQGAYPNRNITMIVPFPAGGQADLAARPVALALER 60 M+RR+LLRA AALPL + AL + A AQG YP RNITMIVPFPAGGQADLAARPVA+ALER Sbjct: 1 MDRRDLLRAVAALPLLRAALPDQALAQG-YPARNITMIVPFPAGGQADLAARPVAMALER 59 Query: 61 ILGKPVIVDNRAGGAGGSIGNAQAARAEPDGYTLLMTLSSLAVLPEADRLFDRPVAYEVS 120 ILGKPVIVDNRAGG GGS+GNA AARAEPDGYTLLMTLSSLAVLPEADRLFDRPVAYEVS Sbjct: 60 ILGKPVIVDNRAGGGGGSVGNAAAARAEPDGYTLLMTLSSLAVLPEADRLFDRPVAYEVS 119 Query: 121 QFAPIARVLADPTLLAVPASAPWKSLQEFVDDAKKRPGQIPYGSSGPYGTLHVAMEMFAA 180 QF PIARVLADPTLLAVP SAPWK+ Q+F++DAKKRPGQI YGSSGPYGTLHVAMEMFA Sbjct: 120 QFMPIARVLADPTLLAVPVSAPWKTAQDFIEDAKKRPGQITYGSSGPYGTLHVAMEMFAN 179 Query: 181 SAGIKLLHVPFRGAGPALTALLSGTVQALASAPGTLKQQVEDGKMRVLANWGAERIASFP 240 SAGIKLLHVPFRGAGPALTALLSGTVQA+A+APGTLK QV+DGK+RVL N GA RIASFP Sbjct: 180 SAGIKLLHVPFRGAGPALTALLSGTVQAIAAAPGTLKPQVDDGKLRVLGNCGARRIASFP 239 Query: 241 DLPTFKELGYKDVEFYIWAGLFAQSTLPVPIMDRLRAAMADAVKAPEVIKTFETAGSPVA 300 D+PTF+ELGYKDVE YIWAGLFAQS+LP PI RLR AMA + +PEV+K+FE +GS VA Sbjct: 240 DVPTFQELGYKDVEMYIWAGLFAQSSLPAPIATRLREAMAQVMASPEVLKSFEASGSLVA 299 Query: 301 YMDAPAFSKFVADDSARLIAAVKKIGKVE 329 Y DAP FS+FVADDSARLI AVKKIG+VE Sbjct: 300 YQDAPEFSRFVADDSARLITAVKKIGRVE 328 >ref|YP_001630856.1| putative secreted protein [Bordetella petrii DSM 12804] emb|CAP42588.1| putative secreted protein [Bordetella petrii] Length = 322 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 165/307 (53%), Positives = 218/307 (71%), Gaps = 2/307 (0%) Query: 23 SAFAQGAYPNRNITMIVPFPAGGQADLAARPVALALERILGKPVIVDNRAGGAGGSIGNA 82 + AQ YP R +TMIVPFP GG AD ARPVA AL R LG+ V+++N+AG AGGS+G Sbjct: 18 ACCAQAQYPERAVTMIVPFPPGGVADTVARPVADALSRELGQSVVIENKAG-AGGSVGIG 76 Query: 83 QAARAEPDGYTLLMTLSSLAVLPEADRLFDRPVAYEVSQFAPIARVLADPTLLAVPASAP 142 QAARA PDGYT+LM+LSS+++LPEAD++ R A+ + QF PIARV ADPT+L V A AP Sbjct: 77 QAARATPDGYTVLMSLSSISILPEADKILGRQAAFRLDQFVPIARVTADPTVLIVRADAP 136 Query: 143 WKSLQEFVDDAKKRPGQIPYGSSGPYGTLHVAMEMFAASAGIKLLHVPFRGAGPALTALL 202 WK++QEFV DAK+RPG + YGSSG YG++HV MEMF +AGI L HVPF GAGPA+ ALL Sbjct: 137 WKTVQEFVADAKRRPGALNYGSSGIYGSMHVPMEMFKGAAGIDLTHVPFTGAGPAVAALL 196 Query: 203 SGTVQALASAPGTLKQQVEDGKMRVLANWGAERIASFPDLPTFKELGYKDVEFYIWAGLF 262 G V A++S P ++ ++ GK+R LA+WG ++A+ P +PT GY DV+F W+ LF Sbjct: 197 GGQVDAISSGPSSVVPHIQAGKLRALAHWGDSQLAALPQVPTLASQGY-DVKFVQWSALF 255 Query: 263 AQSTLPVPIMDRLRAAMADAVKAPEVIKTFETAGSPVAYMDAPAFSKFVADDSARLIAAV 322 + P +DRLR A + P++ +T +AGSPV YMDAP F+ + D+ + AV Sbjct: 256 VPAGTPAQAVDRLREAARKVLNDPKLQQTILSAGSPVQYMDAPEFAAYWKTDAQAMATAV 315 Query: 323 KKIGKVE 329 ++IGKVE Sbjct: 316 QRIGKVE 322 >ref|ZP_06899242.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gb|EFH09054.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 283 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 165/284 (58%), Positives = 202/284 (71%), Gaps = 2/284 (0%) Query: 47 ADLAARPVALALERILGKPVIVDNRAGGAGGSIGNAQAARAEPDGYTLLMTLSSLAVLPE 106 AD+AARPVA ALERI G+ V V NR G AGG +G+A ARA PDGYT LM LSSL VLPE Sbjct: 1 ADVAARPVAAALERIFGQAVPVVNRPG-AGGILGSASVARAAPDGYTALMALSSLGVLPE 59 Query: 107 ADRLFDRPVAYEVSQFAPIARVLADPTLLAVPASAPWKSLQEFVDDAKKRPGQIPYGSSG 166 ++R+ R AY + Q P+ARV ADPT+L VPASAPWK+L EFV AK RPG I YGS+G Sbjct: 60 SERIMGRTPAYTMEQLVPVARVTADPTVLVVPASAPWKTLAEFVAAAKARPGAITYGSAG 119 Query: 167 PYGTLHVAMEMFAASAGIKLLHVPFRGAGPALTALLSGTVQALASAPGTLKQQVEDGKMR 226 Y TLHVAM M +A I LLHVPF+G GPALTALLSGT++ALAS PG V DG++R Sbjct: 120 NYSTLHVAMAMLTGAASIDLLHVPFQGGGPALTALLSGTIEALASGPGPALPHVRDGRLR 179 Query: 227 VLANWGAERIASFPDLPTFKELGYKDVEFYIWAGLFAQSTLPVPIMDRLRAAMADAV-KA 285 LA WG ERIA F D+PTF ELG +VEFYIW+G+F + P +++R A+ A + Sbjct: 180 ALACWGRERIAGFEDVPTFLELGMTEVEFYIWSGVFLPAGTPGAVLERWGQALRTACAED 239 Query: 286 PEVIKTFETAGSPVAYMDAPAFSKFVADDSARLIAAVKKIGKVE 329 + + + AGSP+AY D+ AF FVA D+ RL AV++IG+VE Sbjct: 240 AALRRALDAAGSPLAYQDSAAFRDFVAADTQRLTRAVQRIGRVE 283 >ref|YP_003980549.1| extra-cytoplasmic solute receptor family protein 113 [Achromobacter xylosoxidans A8] gb|ADP17834.1| extra-cytoplasmic solute receptor family protein 113 [Achromobacter xylosoxidans A8] Length = 323 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 156/300 (52%), Positives = 211/300 (70%), Gaps = 2/300 (0%) Query: 30 YPNRNITMIVPFPAGGQADLAARPVALALERILGKPVIVDNRAGGAGGSIGNAQAARAEP 89 YP R +TM+VPFP GG AD ARP+A A+ LG+ V+++N+ G G QA RA+P Sbjct: 26 YPERPVTMVVPFPPGGVADTIARPLAQAMGDKLGQAVVIENKGGAGGAIG-IGQAGRAKP 84 Query: 90 DGYTLLMTLSSLAVLPEADRLFDRPVAYEVSQFAPIARVLADPTLLAVPASAPWKSLQEF 149 DGYTLLM+LSS+++LP ADRL +R AY++ QF PIAR+ ADPT+L V A AP+K+LQEF Sbjct: 85 DGYTLLMSLSSISILPAADRLLERKPAYQLDQFVPIARITADPTVLVVRADAPYKTLQEF 144 Query: 150 VDDAKKRPGQIPYGSSGPYGTLHVAMEMFAASAGIKLLHVPFRGAGPALTALLSGTVQAL 209 VD AKK+ G+ YGSSG YGT+HV MEM +AGIK++HVPF GAGPA+ AL+ G V AL Sbjct: 145 VDAAKKQSGKFSYGSSGIYGTMHVPMEMLQNAAGIKMMHVPFTGAGPAVQALVGGQVDAL 204 Query: 210 ASAPGTLKQQVEDGKMRVLANWGAERIASFPDLPTFKELGYKDVEFYIWAGLFAQSTLPV 269 A+ P ++ Q ++ G+++ LA+WG ++ S P++P+FK GY D+ F W+G+FA + P Sbjct: 205 ATGPSSVMQLIQAGRVKALAHWGDGKLDSLPEVPSFKSQGY-DISFVQWSGVFALAGTPP 263 Query: 270 PIMDRLRAAMADAVKAPEVIKTFETAGSPVAYMDAPAFSKFVADDSARLIAAVKKIGKVE 329 ++D+LR + D PEV GSPV Y+DAPAF ++ DSA L AV +IGKVE Sbjct: 264 AVIDKLRQTVKDIANNPEVRARIAGTGSPVQYLDAPAFDEYWKKDSASLEVAVNRIGKVE 323 >ref|YP_004620610.1| protein bugT [Ramlibacter tataouinensis TTB310] gb|AEG94591.1| protein bugT-like protein [Ramlibacter tataouinensis TTB310] Length = 329 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 163/309 (52%), Positives = 216/309 (69%), Gaps = 2/309 (0%) Query: 21 ANSAFAQGAYPNRNITMIVPFPAGGQADLAARPVALALERILGKPVIVDNRAGGAGGSIG 80 A +A AQ AYP R +TMIVPFP GG AD+ ARPVA A+ R LG+PV+++N+AG GG Sbjct: 23 AGTALAQSAYPARPVTMIVPFPPGGLADIVARPVAEAMGRELGQPVVIENKAGAGGGIG- 81 Query: 81 NAQAARAEPDGYTLLMTLSSLAVLPEADRLFDRPVAYEVSQFAPIARVLADPTLLAVPAS 140 AQAA+A DGYT+L++LSS V+PEAD L RP Y ++ P+AR ADPT+LAV A Sbjct: 82 MAQAAKAPADGYTVLLSLSSFTVIPEADALLGRPPMYSLAALRPVARFTADPTVLAVRAD 141 Query: 141 APWKSLQEFVDDAKKRPGQIPYGSSGPYGTLHVAMEMFAASAGIKLLHVPFRGAGPALTA 200 APWK+ ++FV+DAKKRPG I YGSSG YGT+HV ME+ A + GI++ HVPF GAGPA+ A Sbjct: 142 APWKTAKDFVEDAKKRPGAINYGSSGNYGTMHVPMEILAQNTGIRMTHVPFTGAGPAVVA 201 Query: 201 LLSGTVQALASAPGTLKQQVEDGKMRVLANWGAERIASFPDLPTFKELGYKDVEFYIWAG 260 LL G + A++S P T+ Q V+ GK+RVL +WG+ ++ S P++P K+ GY E+ W+G Sbjct: 202 LLGGQIDAVSSGPATVLQHVKSGKLRVLGHWGSGKLKSMPEVPALKDAGY-GAEYAQWSG 260 Query: 261 LFAQSTLPVPIMDRLRAAMADAVKAPEVIKTFETAGSPVAYMDAPAFSKFVADDSARLIA 320 LF + P P++ RLRAA A P+V + AGSP+ Y D P F ++V D+ R+ Sbjct: 261 LFVPAGTPEPVVQRLRAAARAAAADPKVKEVIANAGSPILYQDTPEFERYVQADARRMAD 320 Query: 321 AVKKIGKVE 329 VKKIGKVE Sbjct: 321 VVKKIGKVE 329