BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0168.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774202.1| hypothetical protein bll7562 [Bradyrhizobium ja...   129   1e-28
ref|YP_317595.1| hypothetical protein Nwi_0981 [Nitrobacter wino...    99   3e-19
ref|ZP_01047050.1| hypothetical protein NB311A_10860 [Nitrobacte...    99   3e-19
ref|NP_771102.1| hypothetical protein bsr4462 [Bradyrhizobium ja...    70   1e-10
ref|YP_001237553.1| hypothetical protein BBta_1417 [Bradyrhizobi...    70   1e-10

>ref|NP_774202.1| hypothetical protein bll7562 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52827.1| bll7562 [Bradyrhizobium japonicum USDA 110]
          Length = 114

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 75/97 (77%), Gaps = 5/97 (5%)

Query: 1  MRSQRIVLSLAIAIGGAATATAAVAEEYRGTWEQQMACTPDVWRLCSDQVPDVQRIVACL 60
          MR++RI L +A+AIGG     AA AEEYRGT EQQMACTPDVWRLCSDQ+PDV RI ACL
Sbjct: 1  MRTERIALGVALAIGGIVAQGAAFAEEYRGTMEQQMACTPDVWRLCSDQIPDVSRITACL 60

Query: 61 RQNTPQLSNNCRAVFESNAQQQQTQGRAQQPQMQGRA 97
          +QNTPQLS+ CRAVF+SN Q Q      QQP  +GRA
Sbjct: 61 QQNTPQLSSACRAVFQSNNQMQ-----PQQPVPRGRA 92


>ref|YP_317595.1| hypothetical protein Nwi_0981 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04243.1| hypothetical protein Nwi_0981 [Nitrobacter winogradskyi Nb-255]
          Length = 94

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 1/79 (1%)

Query: 1  MRSQRIVLSLAIAIGGAATATAAVAEEYRGTWEQQMACTPDVWRLCSDQVPDVQRIVACL 60
          M    +VL   I + GA   + A AEEYRGT+ Q+MACTPDV+RLC  ++PDV RIVACL
Sbjct: 1  MLRHGVVLFSGI-LAGACIVSTAYAEEYRGTFAQRMACTPDVFRLCRSEIPDVGRIVACL 59

Query: 61 RQNTPQLSNNCRAVFESNA 79
          R+N P+L   CRAVFE+NA
Sbjct: 60 RKNQPRLGGPCRAVFEANA 78


>ref|ZP_01047050.1| hypothetical protein NB311A_10860 [Nitrobacter sp. Nb-311A]
 gb|EAQ34955.1| hypothetical protein NB311A_10860 [Nitrobacter sp. Nb-311A]
          Length = 99

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/80 (60%), Positives = 54/80 (67%), Gaps = 2/80 (2%)

Query: 1  MRSQRIVLSLAIAIGGAATATAAVAEEYRGTWEQQMACTPDVWRLCSDQVPDVQRIVACL 60
          M    +VL   I  G    A  A AEEYRGT+ Q+MACTPDV+RLC  ++PDV RIV CL
Sbjct: 1  MLKHGVVLFSGILAG--CIAAGAHAEEYRGTFAQRMACTPDVFRLCGSEIPDVGRIVTCL 58

Query: 61 RQNTPQLSNNCRAVFESNAQ 80
          RQN  QL   CRAVFESNAQ
Sbjct: 59 RQNQTQLGGPCRAVFESNAQ 78


>ref|NP_771102.1| hypothetical protein bsr4462 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49727.1| bsr4462 [Bradyrhizobium japonicum USDA 110]
          Length = 87

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)

Query: 14 IGGAATATAAVAEEYRGTWEQQMACTPDVWRLCSDQVPDVQRIVACLRQNTPQLSNNCRA 73
          +G   T  A+ A   +GT EQ+ ACTPDV+RLC+ ++P+V+ I ACLR+N   LS  CR+
Sbjct: 21 VGLFLTLFASAAHAQQGTAEQRRACTPDVYRLCAGEIPNVRAITACLRRNRSSLSEACRS 80

Query: 74 VFE 76
          VF+
Sbjct: 81 VFD 83


>ref|YP_001237553.1| hypothetical protein BBta_1417 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33647.1| putative exported protein of unknown function [Bradyrhizobium sp.
          BTAi1]
          Length = 93

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 9  SLAIAIGGAATATAAVAEEYRGTWEQQMACTPDVWRLCSDQVPDVQRIVACLRQNTPQLS 68
          +L I +  +  +TA+ A+E RGT E++ ACTPD +RLCS  +PD   + ACLR     LS
Sbjct: 16 ALFIVMVASLVSTASFAQEDRGTAEERAACTPDAFRLCSSYIPDASAVEACLRLRKSNLS 75

Query: 69 NNCRAVFE 76
            C+AVF+
Sbjct: 76 EGCKAVFD 83