BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0162.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_783020.1| TPR repeat-containing protein [Rhodopseudomonas... 297 8e-79 ref|NP_774187.1| hypothetical protein bll7547 [Bradyrhizobium ja... 296 2e-78 ref|YP_001237773.1| hypothetical protein BBta_1657 [Bradyrhizobi... 296 2e-78 ref|YP_533833.1| hypothetical protein RPC_3988 [Rhodopseudomonas... 295 4e-78 ref|ZP_08627331.1| hypothetical protein CSIRO_0390 [Bradyrhizobi... 291 7e-77 >ref|YP_783020.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ08040.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris BisA53] Length = 221 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 152/221 (68%), Positives = 177/221 (80%), Gaps = 3/221 (1%) Query: 5 LGFKFLGPANRRLAILIAALLAMPVAAVAQDD-PRVVPPPKAQK--KLPEAPTKLPKVPA 61 + +FL R A L+AAL+ A AQ P +P P + K PE P KLPK+ A Sbjct: 1 MASRFLAHCRSRPAWLLAALMVAAGPAWAQPQAPERLPDPHGRSLAKPPEPPAKLPKIGA 60 Query: 62 DRSRGLDFLFGALKAAPDEDSARHVEARIWALWLQTPSDTAALLMVRAKAAIDAQNVDVA 121 DRSRGLDFLFGALKAAPDE S++HVEARIWALW QT SDT ALLM R KAA+DAQ DVA Sbjct: 61 DRSRGLDFLFGALKAAPDEASSKHVEARIWALWSQTSSDTTALLMARVKAALDAQKTDVA 120 Query: 122 LKLLDAVIKLRPDYVEAWNRRATIYYLKNDYVRSLGDLQQVLTREPRHFGALAGVGMIMQ 181 LKLLD+V++L+PDY+E WNRRATIYYL+NDY RSL D++QVL REPRHFGALAG+GMIMQ Sbjct: 121 LKLLDSVVRLKPDYIEGWNRRATIYYLQNDYDRSLRDIEQVLVREPRHFGALAGLGMIMQ 180 Query: 182 DMGDDKRALDAFRKALAVDPYLEKVPQIVKQLTEKVEGRDI 222 ++GDDKRALDAFRKALAV+P+L+KVP +VK LTEKVEGRDI Sbjct: 181 ELGDDKRALDAFRKALAVNPHLDKVPDLVKSLTEKVEGRDI 221 >ref|NP_774187.1| hypothetical protein bll7547 [Bradyrhizobium japonicum USDA 110] dbj|BAC52812.1| bll7547 [Bradyrhizobium japonicum USDA 110] Length = 218 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 145/193 (75%), Positives = 170/193 (88%), Gaps = 4/193 (2%) Query: 30 AAVAQDDPRVVPPPKAQKKLPEAPTKLPKVPADRSRGLDFLFGALKAAPDEDSARHVEAR 89 AA Q +P PP QKKLPEAP KLPKV DR++ LDFLFGALKAAPD+ SA+HVEAR Sbjct: 30 AAAQQVEPPT--PPGKQKKLPEAPAKLPKV--DRTKNLDFLFGALKAAPDDVSAKHVEAR 85 Query: 90 IWALWLQTPSDTAALLMVRAKAAIDAQNVDVALKLLDAVIKLRPDYVEAWNRRATIYYLK 149 IWA+WLQTPSDTA+LLM RAK A+DAQ +DVA+KLLD+VIKLRPDY+EAWNRRAT+YY++ Sbjct: 86 IWAIWLQTPSDTASLLMARAKTAVDAQKIDVAIKLLDSVIKLRPDYIEAWNRRATLYYMQ 145 Query: 150 NDYVRSLGDLQQVLTREPRHFGALAGVGMIMQDMGDDKRALDAFRKALAVDPYLEKVPQI 209 NDY RSL D+QQVL REPRHFGALAG+GMIMQ++GD+KRAL+A+RKALAV+P+LEK+P Sbjct: 146 NDYGRSLADIQQVLIREPRHFGALAGLGMIMQEVGDEKRALEAYRKALAVNPHLEKIPDQ 205 Query: 210 VKQLTEKVEGRDI 222 VK LTEKVEGRDI Sbjct: 206 VKALTEKVEGRDI 218 >ref|YP_001237773.1| hypothetical protein BBta_1657 [Bradyrhizobium sp. BTAi1] gb|ABQ33867.1| hypothetical protein BBta_1657 [Bradyrhizobium sp. BTAi1] Length = 192 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 149/196 (76%), Positives = 170/196 (86%), Gaps = 4/196 (2%) Query: 27 MPVAAVAQDDPRVVPPPKAQKKLPEAPTKLPKVPADRSRGLDFLFGALKAAPDEDSARHV 86 MP A AQ +PR PK PEAP KLPKV AD+++GLDFLFGALKAAPD+ SA+HV Sbjct: 1 MPHLAQAQAEPRAGVKPKP----PEAPAKLPKVGADKTKGLDFLFGALKAAPDDVSAKHV 56 Query: 87 EARIWALWLQTPSDTAALLMVRAKAAIDAQNVDVALKLLDAVIKLRPDYVEAWNRRATIY 146 EARIWA+WLQTPSDT ALLM R+KAA+DA+ +VALKLLD+VIKLRPDYVEAWNRRATIY Sbjct: 57 EARIWAIWLQTPSDTVALLMSRSKAAMDARQNEVALKLLDSVIKLRPDYVEAWNRRATIY 116 Query: 147 YLKNDYVRSLGDLQQVLTREPRHFGALAGVGMIMQDMGDDKRALDAFRKALAVDPYLEKV 206 YL+NDY RSL D+QQVL REPRHFGALAG+GMIMQD+G++KRALDAFRKAL V+P+LEKV Sbjct: 117 YLQNDYGRSLADIQQVLLREPRHFGALAGLGMIMQDLGEEKRALDAFRKALDVNPHLEKV 176 Query: 207 PQIVKQLTEKVEGRDI 222 P +VK LTEKVEGRDI Sbjct: 177 PDLVKTLTEKVEGRDI 192 >ref|YP_533833.1| hypothetical protein RPC_3988 [Rhodopseudomonas palustris BisB18] gb|ABD89514.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB18] Length = 219 Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 142/182 (78%), Positives = 161/182 (88%) Query: 41 PPPKAQKKLPEAPTKLPKVPADRSRGLDFLFGALKAAPDEDSARHVEARIWALWLQTPSD 100 P P KKLPE P KLPKV ADR+RGLDFLFGALKAAPDE SA+HVEARIWALW QT SD Sbjct: 38 PSPPELKKLPEPPAKLPKVGADRTRGLDFLFGALKAAPDEASAKHVEARIWALWAQTSSD 97 Query: 101 TAALLMVRAKAAIDAQNVDVALKLLDAVIKLRPDYVEAWNRRATIYYLKNDYVRSLGDLQ 160 T ALLM R+KAA+DA +VALKLLD+V+KLRPDY+E WNRRAT+YYL+NDY SL D++ Sbjct: 98 TTALLMSRSKAALDAGKTEVALKLLDSVVKLRPDYLEGWNRRATLYYLQNDYTHSLRDIE 157 Query: 161 QVLTREPRHFGALAGVGMIMQDMGDDKRALDAFRKALAVDPYLEKVPQIVKQLTEKVEGR 220 QVL REPRHFGALAG+GMIMQD+GDDKRALDAFRKALAV+P+L+KVP++VK LTEKVEGR Sbjct: 158 QVLVREPRHFGALAGLGMIMQDLGDDKRALDAFRKALAVNPHLDKVPELVKTLTEKVEGR 217 Query: 221 DI 222 DI Sbjct: 218 DI 219 >ref|ZP_08627331.1| hypothetical protein CSIRO_0390 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09957.1| hypothetical protein CSIRO_0390 [Bradyrhizobiaceae bacterium SG-6C] Length = 207 Score = 291 bits (744), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 149/207 (71%), Positives = 174/207 (84%), Gaps = 1/207 (0%) Query: 16 RLAILIAALLAMPVAAVAQDDPRVVPPPKAQKKLPEAPTKLPKVPADRSRGLDFLFGALK 75 +LAI +A L A+ A A DPR PP K QKKLP+ P KLP+V D+++ LDFLFGALK Sbjct: 2 KLAIGVAVLAAIAAAPAAAQDPRQ-PPSKQQKKLPQPPAKLPRVIGDKAKNLDFLFGALK 60 Query: 76 AAPDEDSARHVEARIWALWLQTPSDTAALLMVRAKAAIDAQNVDVALKLLDAVIKLRPDY 135 AAPD++SA+ VEARIWA+W TPSDTAALLM RAK A+D + DVALKLLDAVIKLRPDY Sbjct: 61 AAPDQESAKAVEARIWAVWTATPSDTAALLMARAKLAMDGKETDVALKLLDAVIKLRPDY 120 Query: 136 VEAWNRRATIYYLKNDYVRSLGDLQQVLTREPRHFGALAGVGMIMQDMGDDKRALDAFRK 195 +EAWNRRATIYYL+NDY RS+ D++QVL REPRHFGALAG+GMIMQ+ GDDK ALDAFRK Sbjct: 121 IEAWNRRATIYYLQNDYSRSMEDIRQVLIREPRHFGALAGLGMIMQETGDDKHALDAFRK 180 Query: 196 ALAVDPYLEKVPQIVKQLTEKVEGRDI 222 ALA++PYLE+VP +VK LTEKVEGRDI Sbjct: 181 ALAINPYLERVPDLVKSLTEKVEGRDI 207